RNA–Protein interactions for RNA: ENST00000508416.1

SKI-204, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 252 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-204ENST00000508416 LRRC9Q6ZRR7 1453 aa16.54■□□□□ 0.24
SKI-204ENST00000508416 CDC42BPAQ5VT25 1732 aa16.54■□□□□ 0.24
SKI-204ENST00000508416 CDC42BPBQ9Y5S2 1711 aa16.54■□□□□ 0.24
SKI-204ENST00000508416 ARHGAP5Q13017 1502 aa16.54■□□□□ 0.24
SKI-204ENST00000508416 CCNB3Q8WWL7 1395 aa16.52■□□□□ 0.24
SKI-204ENST00000508416 GPATCH8Q9UKJ3 1502 aaKnown RBP16.52■□□□□ 0.24
SKI-204ENST00000508416 KDM4FA0A1W2PPD8 638 aa16.52■□□□□ 0.24
SKI-204ENST00000508416 SUPT6HQ7KZ85 1726 aaKnown RBP16.52■□□□□ 0.24
SKI-204ENST00000508416 PREX2Q70Z35 1606 aa16.52■□□□□ 0.23
SKI-204ENST00000508416 RAPGEF3O95398 923 aa16.51■□□□□ 0.23
SKI-204ENST00000508416 NCOA2Q15596 1464 aa16.49■□□□□ 0.23
SKI-204ENST00000508416 CFDP1Q9UEE9 299 aaPredicted RBP16.49■□□□□ 0.23
SKI-204ENST00000508416 ZNF777Q9ULD5 760 aaPredicted RBP16.49■□□□□ 0.23
SKI-204ENST00000508416 DENND4BO75064 1496 aaPredicted RBP16.48■□□□□ 0.23
SKI-204ENST00000508416 ADGRL1O94910 1474 aa16.48■□□□□ 0.23
SKI-204ENST00000508416 SCAPERQ9BY12 1400 aa16.48■□□□□ 0.23
SKI-204ENST00000508416 ITSN2Q9NZM3 1697 aa16.45■□□□□ 0.22
SKI-204ENST00000508416 RICTORQ6R327 1708 aa16.45■□□□□ 0.22
SKI-204ENST00000508416 FRMPD1Q5SYB0 1578 aa16.43■□□□□ 0.22
SKI-204ENST00000508416 SAMD9LQ8IVG5 1584 aa16.42■□□□□ 0.22
SKI-204ENST00000508416 ZNF644Q9H582 1327 aaPredicted RBP16.42■□□□□ 0.22
SKI-204ENST00000508416 HNRNPMP52272 730 aaKnown RBP eCLIP16.41■□□□□ 0.224e-7■■■■□ 26.3
SKI-204ENST00000508416 AFAP1Q8N556 730 aa16.41■□□□□ 0.22
SKI-204ENST00000508416 ABCC1P33527 1531 aa16.4■□□□□ 0.22
SKI-204ENST00000508416 ARHGEF12Q9NZN5 1544 aa16.4■□□□□ 0.22
SKI-204ENST00000508416 POGZQ7Z3K3 1410 aa16.4■□□□□ 0.22
SKI-204ENST00000508416 PPARGC1BQ86YN6 1023 aaKnown RBP16.39■□□□□ 0.21
SKI-204ENST00000508416 PLEKHH2Q8IVE3 1493 aa16.39■□□□□ 0.21
SKI-204ENST00000508416 TRAPPC8Q9Y2L5 1435 aa16.38■□□□□ 0.21
SKI-204ENST00000508416 MYOM3Q5VTT5 1437 aa16.37■□□□□ 0.21
SKI-204ENST00000508416 KIAA1107Q9UPP5 1409 aa16.37■□□□□ 0.21
SKI-204ENST00000508416 ZNF518AQ6AHZ1 1483 aa16.37■□□□□ 0.21
SKI-204ENST00000508416 MYT1LQ9UL68 1186 aa16.37■□□□□ 0.21
SKI-204ENST00000508416 ZMYM4Q5VZL5 1548 aa16.36■□□□□ 0.21
SKI-204ENST00000508416 SYCP2Q9BX26 1530 aa16.36■□□□□ 0.21
SKI-204ENST00000508416 MAGI2Q86UL8 1455 aa16.35■□□□□ 0.21
SKI-204ENST00000508416 MIA2Q96PC5 1412 aa16.34■□□□□ 0.21
SKI-204ENST00000508416 CAMSAP2Q08AD1 1489 aa16.34■□□□□ 0.21
SKI-204ENST00000508416 KDM5CP41229 1560 aa16.33■□□□□ 0.2
SKI-204ENST00000508416 ZFYVE16Q7Z3T8 1539 aa16.32■□□□□ 0.2
SKI-204ENST00000508416 YEATS2Q9ULM3 1422 aa16.32■□□□□ 0.2
SKI-204ENST00000508416 MBD5Q9P267 1494 aa16.31■□□□□ 0.2
SKI-204ENST00000508416 SPAG9O60271 1321 aaKnown RBP16.31■□□□□ 0.2
SKI-204ENST00000508416 RSPH4AQ5TD94 716 aa16.31■□□□□ 0.2
SKI-204ENST00000508416 MLH3Q9UHC1 1453 aa16.3■□□□□ 0.2
SKI-204ENST00000508416 HECW2Q9P2P5 1572 aa16.3■□□□□ 0.2
SKI-204ENST00000508416 ARHGEF40Q8TER5 1519 aa16.29■□□□□ 0.2
SKI-204ENST00000508416 FGD6Q6ZV73 1430 aa16.28■□□□□ 0.2
SKI-204ENST00000508416 ARID4BQ4LE39 1312 aaPredicted RBP16.28■□□□□ 0.2
SKI-204ENST00000508416 PTPN23Q9H3S7 1636 aa16.28■□□□□ 0.2
SKI-204ENST00000508416 KIDINS220Q9ULH0 1771 aa16.28■□□□□ 0.2
SKI-204ENST00000508416 ATP10AO60312 1499 aa16.28■□□□□ 0.2
SKI-204ENST00000508416 TSPY4P0CV99 314 aa16.26■□□□□ 0.19
SKI-204ENST00000508416 TSPY10P0CW01 314 aa16.26■□□□□ 0.19
SKI-204ENST00000508416 CCDC141Q6ZP82 1450 aa16.26■□□□□ 0.19
SKI-204ENST00000508416 ARHGEF5Q12774 1597 aa16.26■□□□□ 0.19
SKI-204ENST00000508416 ABCA6Q8N139 1617 aa16.24■□□□□ 0.19
SKI-204ENST00000508416 FAM50AQ14320 339 aaKnown RBP16.24■□□□□ 0.19
SKI-204ENST00000508416 DIP2CQ9Y2E4 1556 aa16.24■□□□□ 0.19
SKI-204ENST00000508416 ATP7AQ04656 1500 aa16.24■□□□□ 0.19
SKI-204ENST00000508416 TCOF1Q13428 1488 aaKnown RBP16.23■□□□□ 0.19
SKI-204ENST00000508416 C9orf84Q5VXU9 1444 aa16.23■□□□□ 0.19
SKI-204ENST00000508416 INO80Q9ULG1 1556 aaPredicted RBP16.22■□□□□ 0.19
SKI-204ENST00000508416 RTEL1-TNFRSF6BF6WH68 1400 aa16.22■□□□□ 0.19
SKI-204ENST00000508416 SIGLEC1Q9BZZ2 1709 aa16.21■□□□□ 0.19
SKI-204ENST00000508416 MLECQ14165 292 aa16.19■□□□□ 0.18
SKI-204ENST00000508416 ABCC5O15440 1437 aa16.19■□□□□ 0.18
SKI-204ENST00000508416 REREQ9P2R6 1566 aa16.18■□□□□ 0.18
SKI-204ENST00000508416 BCORL1Q5H9F3 1711 aa16.17■□□□□ 0.18
SKI-204ENST00000508416 DNMT1P26358 1616 aaKnown RBP16.17■□□□□ 0.18
SKI-204ENST00000508416 DAPK1P53355 1430 aa16.17■□□□□ 0.18
SKI-204ENST00000508416 ADGBQ8N7X0 1667 aa16.17■□□□□ 0.18
SKI-204ENST00000508416 MAST1Q9Y2H9 1570 aa16.17■□□□□ 0.18
SKI-204ENST00000508416 A2MP01023 1474 aa16.16■□□□□ 0.18
SKI-204ENST00000508416 CHIC2Q9UKJ5 165 aa16.15■□□□□ 0.18
SKI-204ENST00000508416 CROCC2H7BZ55 1655 aa16.14■□□□□ 0.18
SKI-204ENST00000508416 ADAMTSL3P82987 1691 aa16.14■□□□□ 0.18
SKI-204ENST00000508416 AGLP35573 1532 aa16.14■□□□□ 0.18
SKI-204ENST00000508416 DHX29Q7Z478 1369 aaKnown RBP16.13■□□□□ 0.17
SKI-204ENST00000508416 SHANK2Q9UPX8 1470 aa16.12■□□□□ 0.17
SKI-204ENST00000508416 RRP7BPQ9NSQ0 103 aa16.12■□□□□ 0.17
SKI-204ENST00000508416 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.12■□□□□ 0.174e-6■■■□□ 19.2
SKI-204ENST00000508416 ITGAEP38570 1179 aa16.11■□□□□ 0.17
SKI-204ENST00000508416 PLXNC1O60486 1568 aa16.11■□□□□ 0.17
SKI-204ENST00000508416 RRBP1Q9P2E9 1410 aaKnown RBP16.11■□□□□ 0.17
SKI-204ENST00000508416 MADDQ8WXG6 1647 aa16.1■□□□□ 0.17
SKI-204ENST00000508416 KIF3BO15066 747 aa16.09■□□□□ 0.17
SKI-204ENST00000508416 ANKRD30AQ9BXX3 1397 aa16.09■□□□□ 0.17
SKI-204ENST00000508416 GGT6Q6P531 493 aa16.08■□□□□ 0.16
SKI-204ENST00000508416 FER1L4A9Z1Z3 1794 aa16.08■□□□□ 0.16
SKI-204ENST00000508416 ESF1Q9H501 851 aaKnown RBP16.07■□□□□ 0.16
SKI-204ENST00000508416 KIF15Q9NS87 1388 aa16.07■□□□□ 0.16
SKI-204ENST00000508416 PTPRKQ15262 1439 aa16.07■□□□□ 0.16
SKI-204ENST00000508416 NCOA1Q15788 1441 aa16.07■□□□□ 0.16
SKI-204ENST00000508416 RIMS1Q86UR5 1692 aaKnown RBP16.07■□□□□ 0.16
SKI-204ENST00000508416 DUOX2Q9NRD8 1548 aa16.05■□□□□ 0.16
SKI-204ENST00000508416 PTPRMP28827 1452 aa16.05■□□□□ 0.16
SKI-204ENST00000508416 ADGRL2O95490 1459 aa16.04■□□□□ 0.16
SKI-204ENST00000508416 PLPPR3Q6T4P5 718 aa16.04■□□□□ 0.16
SKI-204ENST00000508416 PPP6R1Q9UPN7 881 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms