RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 CADPS2Q86UW7 1296 aa12.65□□□□□ -0.38
GYPA-205ENST00000508337 TMEM121BQ9BXQ6 578 aaPredicted RBP12.65□□□□□ -0.38
GYPA-205ENST00000508337 LARP6Q9BRS8 491 aaKnown RBP12.63□□□□□ -0.39
GYPA-205ENST00000508337 DDX27Q96GQ7 796 aaKnown RBP12.6□□□□□ -0.39
GYPA-205ENST00000508337 LHX8Q68G74 356 aa12.58□□□□□ -0.4
GYPA-205ENST00000508337 C2orf72A6NCS6 295 aa12.57□□□□□ -0.4
GYPA-205ENST00000508337 POTEB2H3BUK9 544 aa12.57□□□□□ -0.4
GYPA-205ENST00000508337 SLAIN1Q8ND83 568 aa12.57□□□□□ -0.4
GYPA-205ENST00000508337 CRISPLD2Q9H0B8 497 aa12.57□□□□□ -0.4
GYPA-205ENST00000508337 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
GYPA-205ENST00000508337 NCKAP5LQ9HCH0 1330 aa12.56□□□□□ -0.4
GYPA-205ENST00000508337 PPP1R15BQ5SWA1 713 aa12.55□□□□□ -0.4
GYPA-205ENST00000508337 P3H3Q8IVL6 736 aa12.53□□□□□ -0.4
GYPA-205ENST00000508337 KDM2AQ9Y2K7 1162 aa12.52□□□□□ -0.41
GYPA-205ENST00000508337 POTEJP0CG39 1038 aa12.49□□□□□ -0.41
GYPA-205ENST00000508337 DSG2Q14126 1118 aa12.49□□□□□ -0.41
GYPA-205ENST00000508337 MFSD10Q14728 455 aa12.49□□□□□ -0.41
GYPA-205ENST00000508337 PLPP6Q8IY26 295 aa12.49□□□□□ -0.41
GYPA-205ENST00000508337 FOXK1P85037 733 aa12.48□□□□□ -0.41
GYPA-205ENST00000508337 TMEM92Q6UXU6 159 aa12.48□□□□□ -0.41
GYPA-205ENST00000508337 E2F4Q16254 413 aa12.47□□□□□ -0.41
GYPA-205ENST00000508337 KIF3CO14782 793 aa12.46□□□□□ -0.41
GYPA-205ENST00000508337 RIMBP2O15034 1052 aa12.43□□□□□ -0.42
GYPA-205ENST00000508337 ZNF316A6NFI3 1004 aaPredicted RBP12.42□□□□□ -0.42
GYPA-205ENST00000508337 SNPHO15079 494 aa12.42□□□□□ -0.42
GYPA-205ENST00000508337 DOK7Q18PE1 504 aa12.41□□□□□ -0.42
GYPA-205ENST00000508337 ZNF710Q8N1W2 664 aa12.4□□□□□ -0.42
GYPA-205ENST00000508337 UPF1Q92900 1129 aaKnown RBP eCLIP12.4□□□□□ -0.42
GYPA-205ENST00000508337 OTUD5Q96G74 571 aa12.4□□□□□ -0.42
GYPA-205ENST00000508337 NBR1Q14596 966 aa12.39□□□□□ -0.43
GYPA-205ENST00000508337 KCNV2Q8TDN2 545 aa12.38□□□□□ -0.43
GYPA-205ENST00000508337 TBC1D12O60347 775 aa12.37□□□□□ -0.43
GYPA-205ENST00000508337 MAP3K9P80192 1104 aa12.35□□□□□ -0.43
GYPA-205ENST00000508337 CAMK2BQ13554 666 aa12.32□□□□□ -0.44
GYPA-205ENST00000508337 ARHGEF1Q92888 912 aaKnown RBP12.32□□□□□ -0.44
GYPA-205ENST00000508337 DPYSL4O14531 572 aa12.31□□□□□ -0.44
GYPA-205ENST00000508337 BCANQ96GW7 911 aa12.28□□□□□ -0.44
GYPA-205ENST00000508337 EMILIN3Q9NT22 766 aa12.28□□□□□ -0.44
GYPA-205ENST00000508337 SLC34A2O95436 690 aa12.27□□□□□ -0.45
GYPA-205ENST00000508337 TULP1O00294 542 aaPredicted RBP12.26□□□□□ -0.45
GYPA-205ENST00000508337 OXER1Q8TDS5 423 aa12.26□□□□□ -0.45
GYPA-205ENST00000508337 PCDHGA4Q9Y5G9 962 aa12.26□□□□□ -0.45
GYPA-205ENST00000508337 ZSWIM6Q9HCJ5 1215 aa12.25□□□□□ -0.45
GYPA-205ENST00000508337 PTCD2Q8WV60 388 aaKnown RBP12.24□□□□□ -0.45
GYPA-205ENST00000508337 SPDYE16A6NNV3 312 aaPredicted RBP12.23□□□□□ -0.45
GYPA-205ENST00000508337 HOXB3P14651 431 aaPredicted RBP12.23□□□□□ -0.45
GYPA-205ENST00000508337 EVI5O60447 810 aa12.21□□□□□ -0.45
GYPA-205ENST00000508337 ARSIQ5FYB1 569 aa12.21□□□□□ -0.45
GYPA-205ENST00000508337 ARIH1Q9Y4X5 557 aaPredicted RBP12.2□□□□□ -0.46
GYPA-205ENST00000508337 PDIA6Q15084 440 aa12.19□□□□□ -0.46
GYPA-205ENST00000508337 NUDT7P0C024 238 aa12.18□□□□□ -0.46
GYPA-205ENST00000508337 FAM163AQ96GL9 167 aaPredicted RBP12.18□□□□□ -0.46
GYPA-205ENST00000508337 SMYD5Q6GMV2 418 aa12.16□□□□□ -0.46
GYPA-205ENST00000508337 KHSRPQ92945 711 aaKnown RBP eCLIP12.14□□□□□ -0.471e-7■□□□□ 8.2
GYPA-205ENST00000508337 SEMA3EO15041 775 aa12.13□□□□□ -0.47
GYPA-205ENST00000508337 GRXCR2A6NFK2 248 aa12.12□□□□□ -0.47
GYPA-205ENST00000508337 HOXB1P14653 301 aaPredicted RBP12.12□□□□□ -0.47
GYPA-205ENST00000508337 EMP3P54852 163 aa12.12□□□□□ -0.47
GYPA-205ENST00000508337 GPR153Q6NV75 609 aa12.12□□□□□ -0.47
GYPA-205ENST00000508337 DDX12PQ92771 950 aa12.11□□□□□ -0.47
GYPA-205ENST00000508337 ST18O60284 1047 aa12.1□□□□□ -0.47
GYPA-205ENST00000508337 ERBB3P21860 1342 aa12.09□□□□□ -0.47
GYPA-205ENST00000508337 PSDA5PKW4 1024 aaPredicted RBP12.08□□□□□ -0.48
GYPA-205ENST00000508337 ZNF454Q8N9F8 522 aa12.07□□□□□ -0.48
GYPA-205ENST00000508337 MARVELD3Q96A59 401 aa12.06□□□□□ -0.48
GYPA-205ENST00000508337 TESPA1A2RU30 521 aaPredicted RBP12.05□□□□□ -0.48
GYPA-205ENST00000508337 PPP4R3BQ5MIZ7 849 aa12.05□□□□□ -0.48
GYPA-205ENST00000508337 LHX6Q9UPM6 363 aa12.05□□□□□ -0.48
GYPA-205ENST00000508337 JPH4Q96JJ6 628 aa12.04□□□□□ -0.48
GYPA-205ENST00000508337 PHF14O94880 888 aa12.03□□□□□ -0.48
GYPA-205ENST00000508337 MLLT3P42568 568 aaPredicted RBP12.03□□□□□ -0.48
GYPA-205ENST00000508337 KCNH8Q96L42 1107 aa12.03□□□□□ -0.48
GYPA-205ENST00000508337 EPAS1Q99814 870 aa12.03□□□□□ -0.48
GYPA-205ENST00000508337 TYW1BQ6NUM6 668 aa12.02□□□□□ -0.49
GYPA-205ENST00000508337 PTGER2P43116 358 aa12.01□□□□□ -0.49
GYPA-205ENST00000508337 ANO8Q9HCE9 1232 aaPredicted RBP12.01□□□□□ -0.49
GYPA-205ENST00000508337 FAM205CA6NFA0 338 aa12□□□□□ -0.49
GYPA-205ENST00000508337 MAP3K7O43318 606 aa12□□□□□ -0.49
GYPA-205ENST00000508337 VARS2Q5ST30 1063 aaKnown RBP12□□□□□ -0.49
GYPA-205ENST00000508337 FBXW7Q969H0 707 aa12□□□□□ -0.49
GYPA-205ENST00000508337 RBM33Q96EV2 1170 aaKnown RBP11.99□□□□□ -0.49
GYPA-205ENST00000508337 ZDHHC16Q969W1 377 aa11.98□□□□□ -0.49
GYPA-205ENST00000508337 FOSBP53539 338 aa11.97□□□□□ -0.49
GYPA-205ENST00000508337 NUTM2FA1L443 756 aa11.96□□□□□ -0.49
GYPA-205ENST00000508337 LMOD2Q6P5Q4 547 aa11.96□□□□□ -0.49
GYPA-205ENST00000508337 KDM4FA0A1W2PPD8 638 aa11.95□□□□□ -0.5
GYPA-205ENST00000508337 PCDHGA10Q9Y5H3 936 aa11.95□□□□□ -0.5
GYPA-205ENST00000508337 GPIHBP1Q8IV16 184 aa11.94□□□□□ -0.5
GYPA-205ENST00000508337 EN1Q05925 392 aaPredicted RBP11.93□□□□□ -0.5
GYPA-205ENST00000508337 HS3ST6Q96QI5 342 aa11.92□□□□□ -0.5
GYPA-205ENST00000508337 OSBPP22059 807 aa11.91□□□□□ -0.5
GYPA-205ENST00000508337 PTPREP23469 700 aa11.91□□□□□ -0.5
GYPA-205ENST00000508337 RBM26Q5T8P6 1007 aaKnown RBP11.91□□□□□ -0.5
GYPA-205ENST00000508337 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.89□□□□□ -0.51
GYPA-205ENST00000508337 KCNK17Q96T54 332 aa11.89□□□□□ -0.51
GYPA-205ENST00000508337 ADAM33Q9BZ11 813 aa11.89□□□□□ -0.51
GYPA-205ENST00000508337 BCL2L12Q9HB09 334 aa11.87□□□□□ -0.51
GYPA-205ENST00000508337 LCE2DQ5TA82 110 aaPredicted RBP11.86□□□□□ -0.51
GYPA-205ENST00000508337 PBX2P40425 430 aa11.85□□□□□ -0.51
GYPA-205ENST00000508337 TSR1Q2NL82 804 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms