RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 CFDP1Q9UEE9 299 aaPredicted RBP20.66■□□□□ 0.9
DDX41-208ENST00000507955 ABCC5O15440 1437 aa20.66■□□□□ 0.9
DDX41-208ENST00000507955 DAPK1P53355 1430 aa20.66■□□□□ 0.9
DDX41-208ENST00000507955 CARMIL2Q6F5E8 1435 aa20.63■□□□□ 0.89
DDX41-208ENST00000507955 GCC2Q8IWJ2 1684 aa20.62■□□□□ 0.89
DDX41-208ENST00000507955 KIF14Q15058 1648 aa20.62■□□□□ 0.89
DDX41-208ENST00000507955 TROQ12816 1431 aaPredicted RBP20.62■□□□□ 0.89
DDX41-208ENST00000507955 KDM5BQ9UGL1 1544 aa20.58■□□□□ 0.89
DDX41-208ENST00000507955 GPATCH8Q9UKJ3 1502 aaKnown RBP20.57■□□□□ 0.88
DDX41-208ENST00000507955 AKNAQ7Z591 1439 aa20.56■□□□□ 0.88
DDX41-208ENST00000507955 DNMT1P26358 1616 aaKnown RBP20.56■□□□□ 0.88
DDX41-208ENST00000507955 PLEKHD1A6NEE1 506 aa20.56■□□□□ 0.88
DDX41-208ENST00000507955 CAMSAP2Q08AD1 1489 aa20.55■□□□□ 0.88
DDX41-208ENST00000507955 L3MBTL2Q969R5 705 aa20.55■□□□□ 0.88
DDX41-208ENST00000507955 SLC4A1APQ9BWU0 796 aaKnown RBP20.55■□□□□ 0.88
DDX41-208ENST00000507955 ATP10BO94823 1461 aa20.53■□□□□ 0.88
DDX41-208ENST00000507955 ROCK1Q13464 1354 aa20.51■□□□□ 0.87
DDX41-208ENST00000507955 ABCA8O94911 1581 aa20.48■□□□□ 0.87
DDX41-208ENST00000507955 HSPA5P11021 654 aaKnown RBP20.48■□□□□ 0.87
DDX41-208ENST00000507955 PTPRGP23470 1445 aa20.47■□□□□ 0.87
DDX41-208ENST00000507955 NCOA1Q15788 1441 aa20.47■□□□□ 0.87
DDX41-208ENST00000507955 SUPT16HQ9Y5B9 1047 aaKnown RBP20.47■□□□□ 0.87
DDX41-208ENST00000507955 ANKRD30BQ9BXX2 1392 aa20.46■□□□□ 0.87
DDX41-208ENST00000507955 HNRNPMP52272 730 aaKnown RBP eCLIP20.45■□□□□ 0.86
DDX41-208ENST00000507955 NBPF8Q3BBV2 869 aa20.44■□□□□ 0.86
DDX41-208ENST00000507955 ANP32CO43423 234 aa20.42■□□□□ 0.86
DDX41-208ENST00000507955 CHD1O14646 1710 aa20.42■□□□□ 0.86
DDX41-208ENST00000507955 ITSN2Q9NZM3 1697 aa20.42■□□□□ 0.86
DDX41-208ENST00000507955 ADCY10Q96PN6 1610 aa20.41■□□□□ 0.86
DDX41-208ENST00000507955 WASHC2AQ641Q2 1341 aa20.41■□□□□ 0.86
DDX41-208ENST00000507955 ABCC10Q5T3U5 1492 aa20.4■□□□□ 0.86
DDX41-208ENST00000507955 CDC42BPAQ5VT25 1732 aa20.4■□□□□ 0.86
DDX41-208ENST00000507955 PZPP20742 1482 aa20.39■□□□□ 0.86
DDX41-208ENST00000507955 C11orf95C9JLR9 678 aaPredicted RBP20.39■□□□□ 0.85
DDX41-208ENST00000507955 PKD2Q13563 968 aa20.39■□□□□ 0.85
DDX41-208ENST00000507955 ERCC6L2Q5T890 1561 aa20.38■□□□□ 0.85
DDX41-208ENST00000507955 EIF4G2P78344 907 aaKnown RBP eCLIP20.37■□□□□ 0.85
DDX41-208ENST00000507955 RPRD2Q5VT52 1461 aaKnown RBP20.37■□□□□ 0.85
DDX41-208ENST00000507955 ANKRD30AQ9BXX3 1397 aa20.36■□□□□ 0.85
DDX41-208ENST00000507955 ZNF326Q5BKZ1 582 aaKnown RBP20.36■□□□□ 0.85
DDX41-208ENST00000507955 ANKRD50Q9ULJ7 1429 aa20.34■□□□□ 0.85
DDX41-208ENST00000507955 TSPY4P0CV99 314 aa20.34■□□□□ 0.85
DDX41-208ENST00000507955 TSPY10P0CW01 314 aa20.34■□□□□ 0.85
DDX41-208ENST00000507955 C9orf84Q5VXU9 1444 aa20.33■□□□□ 0.84
DDX41-208ENST00000507955 TEX14Q8IWB6 1497 aa20.32■□□□□ 0.84
DDX41-208ENST00000507955 CROCC2H7BZ55 1655 aa20.32■□□□□ 0.84
DDX41-208ENST00000507955 ADGBQ8N7X0 1667 aa20.32■□□□□ 0.84
DDX41-208ENST00000507955 ADGRL2O95490 1459 aa20.31■□□□□ 0.84
DDX41-208ENST00000507955 NUP155O75694 1391 aa20.31■□□□□ 0.84
DDX41-208ENST00000507955 CCER2I3L3R5 266 aa20.27■□□□□ 0.84
DDX41-208ENST00000507955 KIAA1107Q9UPP5 1409 aa20.26■□□□□ 0.83
DDX41-208ENST00000507955 KIF15Q9NS87 1388 aa20.26■□□□□ 0.83
DDX41-208ENST00000507955 MBD5Q9P267 1494 aa20.25■□□□□ 0.83
DDX41-208ENST00000507955 CNGB1Q14028 1251 aaPredicted RBP20.24■□□□□ 0.83
DDX41-208ENST00000507955 CDC42BPBQ9Y5S2 1711 aa20.23■□□□□ 0.83
DDX41-208ENST00000507955 SAMD9LQ8IVG5 1584 aa20.23■□□□□ 0.83
DDX41-208ENST00000507955 CCDC184Q52MB2 194 aa20.23■□□□□ 0.83
DDX41-208ENST00000507955 KDM2AQ9Y2K7 1162 aa20.22■□□□□ 0.83
DDX41-208ENST00000507955 TTC37Q6PGP7 1564 aa20.21■□□□□ 0.83
DDX41-208ENST00000507955 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.21■□□□□ 0.833e-8■■■□□ 16.5
DDX41-208ENST00000507955 POLR3GLQ9BT43 218 aa20.21■□□□□ 0.83
DDX41-208ENST00000507955 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
DDX41-208ENST00000507955 CCDC7Q96M83 1385 aa20.2■□□□□ 0.82
DDX41-208ENST00000507955 BCANQ96GW7 911 aa20.19■□□□□ 0.82
DDX41-208ENST00000507955 SHANK2Q9UPX8 1470 aa20.18■□□□□ 0.82
DDX41-208ENST00000507955 ARHGAP5Q13017 1502 aa20.18■□□□□ 0.82
DDX41-208ENST00000507955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.18■□□□□ 0.82
DDX41-208ENST00000507955 KIF7Q2M1P5 1343 aa20.18■□□□□ 0.82
DDX41-208ENST00000507955 SYCP2Q9BX26 1530 aa20.17■□□□□ 0.82
DDX41-208ENST00000507955 SPATA31E1Q6ZUB1 1445 aa20.16■□□□□ 0.82
DDX41-208ENST00000507955 CCDC141Q6ZP82 1450 aa20.16■□□□□ 0.82
DDX41-208ENST00000507955 TSHZ2Q9NRE2 1034 aa20.16■□□□□ 0.82
DDX41-208ENST00000507955 PREX2Q70Z35 1606 aa20.16■□□□□ 0.82
DDX41-208ENST00000507955 ABCC2Q92887 1545 aa20.14■□□□□ 0.81
DDX41-208ENST00000507955 CNTLNQ9NXG0 1405 aa20.14■□□□□ 0.81
DDX41-208ENST00000507955 DCAF11Q8TEB1 546 aa20.13■□□□□ 0.81
DDX41-208ENST00000507955 ARHGEF5Q12774 1597 aa20.12■□□□□ 0.81
DDX41-208ENST00000507955 HNRNPUQ00839 825 aaKnown RBP eCLIP20.12■□□□□ 0.81
DDX41-208ENST00000507955 MYT1Q01538 1121 aa20.12■□□□□ 0.81
DDX41-208ENST00000507955 FKBP8Q14318 412 aa20.12■□□□□ 0.81
DDX41-208ENST00000507955 RGL3Q3MIN7 710 aa20.1■□□□□ 0.81
DDX41-208ENST00000507955 USP47Q96K76 1375 aa20.1■□□□□ 0.81
DDX41-208ENST00000507955 PRKRIP1Q9H875 184 aaPredicted RBP20.09■□□□□ 0.81
DDX41-208ENST00000507955 ARHGEF12Q9NZN5 1544 aa20.09■□□□□ 0.81
DDX41-208ENST00000507955 FAM9BQ8IZU0 186 aa20.07■□□□□ 0.8
DDX41-208ENST00000507955 RSPH4AQ5TD94 716 aa20.06■□□□□ 0.8
DDX41-208ENST00000507955 CARD11Q9BXL7 1154 aa20.06■□□□□ 0.8
DDX41-208ENST00000507955 FAM135AQ9P2D6 1515 aa20.06■□□□□ 0.8
DDX41-208ENST00000507955 PLEKHH2Q8IVE3 1493 aa20.06■□□□□ 0.8
DDX41-208ENST00000507955 CLASP1Q7Z460 1538 aa20.05■□□□□ 0.8
DDX41-208ENST00000507955 BCORL1Q5H9F3 1711 aa20.04■□□□□ 0.8
DDX41-208ENST00000507955 ZCCHC11Q5TAX3 1644 aaKnown RBP20.04■□□□□ 0.8
DDX41-208ENST00000507955 KDM5DQ9BY66 1539 aa20.03■□□□□ 0.8
DDX41-208ENST00000507955 AFAP1Q8N556 730 aa20.03■□□□□ 0.8
DDX41-208ENST00000507955 MYO5CQ9NQX4 1742 aa20.02■□□□□ 0.8
DDX41-208ENST00000507955 MRS2Q9HD23 443 aa20.02■□□□□ 0.8
DDX41-208ENST00000507955 ST20-MTHFSA0A0A6YYL1 179 aa20.01■□□□□ 0.79
DDX41-208ENST00000507955 SENP3-EIF4A1A0A087X0R7 540 aa20.01■□□□□ 0.79
DDX41-208ENST00000507955 EFCAB2Q5VUJ9 269 aa20.01■□□□□ 0.79
DDX41-208ENST00000507955 PLCH2O75038 1416 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms