RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 CD109Q6YHK3 1445 aa21.05■□□□□ 0.96
UBE2D3-221ENST00000507845 CDC42BPAQ5VT25 1732 aa21.04■□□□□ 0.96
UBE2D3-221ENST00000507845 PPP4R3CPQ6ZMV5 832 aa21.03■□□□□ 0.96
UBE2D3-221ENST00000507845 NCOA2Q15596 1464 aa21.02■□□□□ 0.96
UBE2D3-221ENST00000507845 CDC42BPBQ9Y5S2 1711 aa21.01■□□□□ 0.95
UBE2D3-221ENST00000507845 PREX2Q70Z35 1606 aa21■□□□□ 0.95
UBE2D3-221ENST00000507845 ARAP3Q8WWN8 1544 aa20.98■□□□□ 0.95
UBE2D3-221ENST00000507845 PLCH2O75038 1416 aa20.97■□□□□ 0.95
UBE2D3-221ENST00000507845 ITSN2Q9NZM3 1697 aa20.97■□□□□ 0.95
UBE2D3-221ENST00000507845 GPATCH8Q9UKJ3 1502 aaKnown RBP20.97■□□□□ 0.95
UBE2D3-221ENST00000507845 TEX14Q8IWB6 1497 aa20.96■□□□□ 0.95
UBE2D3-221ENST00000507845 CCNB3Q8WWL7 1395 aa20.96■□□□□ 0.95
UBE2D3-221ENST00000507845 CFAP74Q9C0B2 1584 aa20.93■□□□□ 0.94
UBE2D3-221ENST00000507845 ARHGAP5Q13017 1502 aa20.93■□□□□ 0.94
UBE2D3-221ENST00000507845 PPARGC1BQ86YN6 1023 aaKnown RBP20.92■□□□□ 0.94
UBE2D3-221ENST00000507845 FANCAO15360 1455 aa20.91■□□□□ 0.94
UBE2D3-221ENST00000507845 NEO1Q92859 1461 aa20.9■□□□□ 0.94
UBE2D3-221ENST00000507845 PHLDB1Q86UU1 1377 aa20.89■□□□□ 0.93
UBE2D3-221ENST00000507845 MYOM3Q5VTT5 1437 aa20.88■□□□□ 0.93
UBE2D3-221ENST00000507845 DMRT2Q9Y5R5 561 aa20.88■□□□□ 0.93
UBE2D3-221ENST00000507845 EFCAB2Q5VUJ9 269 aa20.87■□□□□ 0.93
UBE2D3-221ENST00000507845 AKNAQ7Z591 1439 aa20.86■□□□□ 0.93
UBE2D3-221ENST00000507845 SAMD9LQ8IVG5 1584 aa20.85■□□□□ 0.93
UBE2D3-221ENST00000507845 CFDP1Q9UEE9 299 aaPredicted RBP20.85■□□□□ 0.93
UBE2D3-221ENST00000507845 MIA2Q96PC5 1412 aa20.82■□□□□ 0.92
UBE2D3-221ENST00000507845 ABCC1P33527 1531 aa20.82■□□□□ 0.92
UBE2D3-221ENST00000507845 KDM6BO15054 1643 aa20.82■□□□□ 0.92
UBE2D3-221ENST00000507845 ADGRL1O94910 1474 aa20.81■□□□□ 0.92
UBE2D3-221ENST00000507845 FGD6Q6ZV73 1430 aa20.8■□□□□ 0.92
UBE2D3-221ENST00000507845 ZNF777Q9ULD5 760 aaPredicted RBP20.8■□□□□ 0.92
UBE2D3-221ENST00000507845 COL17A1Q9UMD9 1497 aaPredicted RBP20.8■□□□□ 0.92
UBE2D3-221ENST00000507845 PTPN23Q9H3S7 1636 aa20.79■□□□□ 0.92
UBE2D3-221ENST00000507845 CAMSAP2Q08AD1 1489 aa20.79■□□□□ 0.92
UBE2D3-221ENST00000507845 RICTORQ6R327 1708 aa20.78■□□□□ 0.92
UBE2D3-221ENST00000507845 PLEKHH2Q8IVE3 1493 aa20.78■□□□□ 0.92
UBE2D3-221ENST00000507845 ARHGEF12Q9NZN5 1544 aa20.78■□□□□ 0.92
UBE2D3-221ENST00000507845 SCAPERQ9BY12 1400 aa20.78■□□□□ 0.92
UBE2D3-221ENST00000507845 ZNF644Q9H582 1327 aaPredicted RBP20.78■□□□□ 0.92
UBE2D3-221ENST00000507845 SYCP2Q9BX26 1530 aa20.77■□□□□ 0.92
UBE2D3-221ENST00000507845 FRMPD1Q5SYB0 1578 aa20.76■□□□□ 0.91
UBE2D3-221ENST00000507845 DENND4BO75064 1496 aaPredicted RBP20.75■□□□□ 0.91
UBE2D3-221ENST00000507845 KIAA1107Q9UPP5 1409 aa20.75■□□□□ 0.91
UBE2D3-221ENST00000507845 TCOF1Q13428 1488 aaKnown RBP20.75■□□□□ 0.91
UBE2D3-221ENST00000507845 POGZQ7Z3K3 1410 aa20.73■□□□□ 0.91
UBE2D3-221ENST00000507845 TRAPPC8Q9Y2L5 1435 aa20.71■□□□□ 0.91
UBE2D3-221ENST00000507845 MBD5Q9P267 1494 aa20.71■□□□□ 0.91
UBE2D3-221ENST00000507845 ARHGEF5Q12774 1597 aa20.71■□□□□ 0.91
UBE2D3-221ENST00000507845 RAPGEF3O95398 923 aa20.7■□□□□ 0.9
UBE2D3-221ENST00000507845 HNRNPMP52272 730 aaKnown RBP eCLIP20.7■□□□□ 0.94e-13■■■■■ 32.7
UBE2D3-221ENST00000507845 ZNF518AQ6AHZ1 1483 aa20.69■□□□□ 0.9
UBE2D3-221ENST00000507845 KDM5CP41229 1560 aa20.69■□□□□ 0.9
UBE2D3-221ENST00000507845 RRBP1Q9P2E9 1410 aaKnown RBP20.69■□□□□ 0.9
UBE2D3-221ENST00000507845 ZMYM4Q5VZL5 1548 aa20.68■□□□□ 0.9
UBE2D3-221ENST00000507845 AFAP1Q8N556 730 aa20.66■□□□□ 0.9
UBE2D3-221ENST00000507845 CCDC141Q6ZP82 1450 aa20.66■□□□□ 0.9
UBE2D3-221ENST00000507845 DNMT1P26358 1616 aaKnown RBP20.66■□□□□ 0.9
UBE2D3-221ENST00000507845 CROCC2H7BZ55 1655 aa20.65■□□□□ 0.9
UBE2D3-221ENST00000507845 FAM50AQ14320 339 aaKnown RBP20.64■□□□□ 0.89
UBE2D3-221ENST00000507845 HECW2Q9P2P5 1572 aa20.63■□□□□ 0.89
UBE2D3-221ENST00000507845 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.63■□□□□ 0.89
UBE2D3-221ENST00000507845 RSPH4AQ5TD94 716 aa20.62■□□□□ 0.89
UBE2D3-221ENST00000507845 KIDINS220Q9ULH0 1771 aa20.62■□□□□ 0.89
UBE2D3-221ENST00000507845 INO80Q9ULG1 1556 aaPredicted RBP20.61■□□□□ 0.89
UBE2D3-221ENST00000507845 ABCC5O15440 1437 aa20.61■□□□□ 0.89
UBE2D3-221ENST00000507845 MLH3Q9UHC1 1453 aa20.6■□□□□ 0.89
UBE2D3-221ENST00000507845 DAPK1P53355 1430 aa20.6■□□□□ 0.89
UBE2D3-221ENST00000507845 MAST1Q9Y2H9 1570 aa20.59■□□□□ 0.89
UBE2D3-221ENST00000507845 MAGI2Q86UL8 1455 aa20.59■□□□□ 0.89
UBE2D3-221ENST00000507845 ATP7AQ04656 1500 aa20.58■□□□□ 0.89
UBE2D3-221ENST00000507845 ZFYVE16Q7Z3T8 1539 aa20.58■□□□□ 0.89
UBE2D3-221ENST00000507845 ARHGEF40Q8TER5 1519 aa20.58■□□□□ 0.88
UBE2D3-221ENST00000507845 SPAG9O60271 1321 aaKnown RBP20.57■□□□□ 0.88
UBE2D3-221ENST00000507845 SHANK2Q9UPX8 1470 aa20.57■□□□□ 0.88
UBE2D3-221ENST00000507845 ABCA6Q8N139 1617 aa20.56■□□□□ 0.88
UBE2D3-221ENST00000507845 RTEL1-TNFRSF6BF6WH68 1400 aa20.55■□□□□ 0.88
UBE2D3-221ENST00000507845 YEATS2Q9ULM3 1422 aa20.55■□□□□ 0.88
UBE2D3-221ENST00000507845 DIP2CQ9Y2E4 1556 aa20.55■□□□□ 0.88
UBE2D3-221ENST00000507845 C9orf84Q5VXU9 1444 aa20.54■□□□□ 0.88
UBE2D3-221ENST00000507845 ADGBQ8N7X0 1667 aa20.54■□□□□ 0.88
UBE2D3-221ENST00000507845 TSPY4P0CV99 314 aa20.53■□□□□ 0.88
UBE2D3-221ENST00000507845 TSPY10P0CW01 314 aa20.53■□□□□ 0.88
UBE2D3-221ENST00000507845 PTPRKQ15262 1439 aa20.53■□□□□ 0.88
UBE2D3-221ENST00000507845 PLXNC1O60486 1568 aa20.51■□□□□ 0.87
UBE2D3-221ENST00000507845 MYT1LQ9UL68 1186 aa20.51■□□□□ 0.87
UBE2D3-221ENST00000507845 CNKSR2Q8WXI2 1034 aa20.5■□□□□ 0.87
UBE2D3-221ENST00000507845 ATP10AO60312 1499 aa20.49■□□□□ 0.87
UBE2D3-221ENST00000507845 ADGRL2O95490 1459 aa20.48■□□□□ 0.87
UBE2D3-221ENST00000507845 ITGAEP38570 1179 aa20.47■□□□□ 0.87
UBE2D3-221ENST00000507845 CHIC2Q9UKJ5 165 aa20.47■□□□□ 0.87
UBE2D3-221ENST00000507845 SIGLEC1Q9BZZ2 1709 aa20.47■□□□□ 0.87
UBE2D3-221ENST00000507845 REREQ9P2R6 1566 aa20.46■□□□□ 0.87
UBE2D3-221ENST00000507845 ANKRD30AQ9BXX3 1397 aa20.44■□□□□ 0.86
UBE2D3-221ENST00000507845 NCOA1Q15788 1441 aa20.44■□□□□ 0.86
UBE2D3-221ENST00000507845 ROCK1Q13464 1354 aa20.43■□□□□ 0.86
UBE2D3-221ENST00000507845 A2MP01023 1474 aa20.43■□□□□ 0.86
UBE2D3-221ENST00000507845 KIF15Q9NS87 1388 aa20.41■□□□□ 0.86
UBE2D3-221ENST00000507845 DUOX2Q9NRD8 1548 aa20.41■□□□□ 0.86
UBE2D3-221ENST00000507845 DHX29Q7Z478 1369 aaKnown RBP20.39■□□□□ 0.85
UBE2D3-221ENST00000507845 RRP7BPQ9NSQ0 103 aa20.39■□□□□ 0.85
UBE2D3-221ENST00000507845 AGLP35573 1532 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms