RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 FGD6Q6ZV73 1430 aa21.85■■□□□ 1.09
RNF4-208ENST00000507247 ARAP3Q8WWN8 1544 aa21.85■■□□□ 1.09
RNF4-208ENST00000507247 ARHGAP5Q13017 1502 aa21.84■■□□□ 1.09
RNF4-208ENST00000507247 PTPN23Q9H3S7 1636 aa21.83■■□□□ 1.08
RNF4-208ENST00000507247 MIA2Q96PC5 1412 aa21.82■■□□□ 1.08
RNF4-208ENST00000507247 RRBP1Q9P2E9 1410 aaKnown RBP21.81■■□□□ 1.08
RNF4-208ENST00000507247 SAMD9LQ8IVG5 1584 aa21.81■■□□□ 1.08
RNF4-208ENST00000507247 CFDP1Q9UEE9 299 aaPredicted RBP21.8■■□□□ 1.08
RNF4-208ENST00000507247 TCOF1Q13428 1488 aaKnown RBP21.78■■□□□ 1.08
RNF4-208ENST00000507247 FANCAO15360 1455 aa21.77■■□□□ 1.08
RNF4-208ENST00000507247 CAMSAP2Q08AD1 1489 aa21.77■■□□□ 1.08
RNF4-208ENST00000507247 CFAP74Q9C0B2 1584 aa21.76■■□□□ 1.07
RNF4-208ENST00000507247 ZNF644Q9H582 1327 aaPredicted RBP21.76■■□□□ 1.07
RNF4-208ENST00000507247 ZNF777Q9ULD5 760 aaPredicted RBP21.74■■□□□ 1.07
RNF4-208ENST00000507247 EFCAB2Q5VUJ9 269 aa21.73■■□□□ 1.07
RNF4-208ENST00000507247 ABCC1P33527 1531 aa21.72■■□□□ 1.07
RNF4-208ENST00000507247 NEO1Q92859 1461 aa21.71■■□□□ 1.07
RNF4-208ENST00000507247 TEX14Q8IWB6 1497 aa21.71■■□□□ 1.07
RNF4-208ENST00000507247 SYCP2Q9BX26 1530 aa21.7■■□□□ 1.07
RNF4-208ENST00000507247 FAM50AQ14320 339 aaKnown RBP21.7■■□□□ 1.06
RNF4-208ENST00000507247 AKNAQ7Z591 1439 aa21.7■■□□□ 1.06
RNF4-208ENST00000507247 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.69■■□□□ 1.06
RNF4-208ENST00000507247 ARHGEF12Q9NZN5 1544 aa21.69■■□□□ 1.06
RNF4-208ENST00000507247 DNMT1P26358 1616 aaKnown RBP21.67■■□□□ 1.06
RNF4-208ENST00000507247 ADGRL1O94910 1474 aa21.67■■□□□ 1.06
RNF4-208ENST00000507247 PLEKHH2Q8IVE3 1493 aa21.67■■□□□ 1.06
RNF4-208ENST00000507247 MBD5Q9P267 1494 aa21.66■■□□□ 1.06
RNF4-208ENST00000507247 KIAA1107Q9UPP5 1409 aa21.66■■□□□ 1.06
RNF4-208ENST00000507247 KDM6BO15054 1643 aa21.66■■□□□ 1.06
RNF4-208ENST00000507247 ARHGEF5Q12774 1597 aa21.65■■□□□ 1.06
RNF4-208ENST00000507247 CROCC2H7BZ55 1655 aa21.64■■□□□ 1.05
RNF4-208ENST00000507247 TRIM26Q12899 539 aaPredicted RBP21.64■■□□□ 1.05
RNF4-208ENST00000507247 SCAPERQ9BY12 1400 aa21.63■■□□□ 1.05
RNF4-208ENST00000507247 HNRNPMP52272 730 aaKnown RBP eCLIP21.63■■□□□ 1.056e-9■■■■■ 27.4
RNF4-208ENST00000507247 AEBP2Q6ZN18 517 aaPredicted RBP21.63■■□□□ 1.05
RNF4-208ENST00000507247 TRAPPC8Q9Y2L5 1435 aa21.62■■□□□ 1.05
RNF4-208ENST00000507247 DAPK1P53355 1430 aa21.61■■□□□ 1.05
RNF4-208ENST00000507247 ABCC5O15440 1437 aa21.6■■□□□ 1.05
RNF4-208ENST00000507247 RICTORQ6R327 1708 aa21.6■■□□□ 1.05
RNF4-208ENST00000507247 CCDC141Q6ZP82 1450 aa21.59■■□□□ 1.05
RNF4-208ENST00000507247 PTPRKQ15262 1439 aa21.59■■□□□ 1.05
RNF4-208ENST00000507247 FRMPD1Q5SYB0 1578 aa21.58■■□□□ 1.05
RNF4-208ENST00000507247 POGZQ7Z3K3 1410 aa21.57■■□□□ 1.04
RNF4-208ENST00000507247 ITGAEP38570 1179 aa21.57■■□□□ 1.04
RNF4-208ENST00000507247 DENND4BO75064 1496 aaPredicted RBP21.57■■□□□ 1.04
RNF4-208ENST00000507247 COL17A1Q9UMD9 1497 aaPredicted RBP21.56■■□□□ 1.04
RNF4-208ENST00000507247 KDM5CP41229 1560 aa21.55■■□□□ 1.04
RNF4-208ENST00000507247 ZNF518AQ6AHZ1 1483 aa21.54■■□□□ 1.04
RNF4-208ENST00000507247 SHANK2Q9UPX8 1470 aa21.54■■□□□ 1.04
RNF4-208ENST00000507247 MAST1Q9Y2H9 1570 aa21.53■■□□□ 1.04
RNF4-208ENST00000507247 RSPH4AQ5TD94 716 aa21.53■■□□□ 1.04
RNF4-208ENST00000507247 AFAP1Q8N556 730 aa21.53■■□□□ 1.04
RNF4-208ENST00000507247 ADGBQ8N7X0 1667 aa21.53■■□□□ 1.04
RNF4-208ENST00000507247 RAPGEF3O95398 923 aa21.51■■□□□ 1.03
RNF4-208ENST00000507247 C9orf84Q5VXU9 1444 aa21.51■■□□□ 1.03
RNF4-208ENST00000507247 INO80Q9ULG1 1556 aaPredicted RBP21.51■■□□□ 1.03
RNF4-208ENST00000507247 ZFYVE16Q7Z3T8 1539 aa21.49■■□□□ 1.03
RNF4-208ENST00000507247 HECW2Q9P2P5 1572 aa21.48■■□□□ 1.03
RNF4-208ENST00000507247 KIDINS220Q9ULH0 1771 aa21.48■■□□□ 1.03
RNF4-208ENST00000507247 CHIC2Q9UKJ5 165 aa21.48■■□□□ 1.03
RNF4-208ENST00000507247 ZMYM4Q5VZL5 1548 aa21.48■■□□□ 1.03
RNF4-208ENST00000507247 ADGRL2O95490 1459 aa21.47■■□□□ 1.03
RNF4-208ENST00000507247 ATP7AQ04656 1500 aa21.47■■□□□ 1.03
RNF4-208ENST00000507247 PCGF6Q9BYE7 350 aa21.47■■□□□ 1.03
RNF4-208ENST00000507247 TSPY4P0CV99 314 aa21.46■■□□□ 1.03
RNF4-208ENST00000507247 TSPY10P0CW01 314 aa21.46■■□□□ 1.03
RNF4-208ENST00000507247 SPAG9O60271 1321 aaKnown RBP21.45■■□□□ 1.02
RNF4-208ENST00000507247 RTEL1-TNFRSF6BF6WH68 1400 aa21.45■■□□□ 1.02
RNF4-208ENST00000507247 PLXNC1O60486 1568 aa21.44■■□□□ 1.02
RNF4-208ENST00000507247 MLH3Q9UHC1 1453 aa21.44■■□□□ 1.02
RNF4-208ENST00000507247 ROCK1Q13464 1354 aa21.43■■□□□ 1.02
RNF4-208ENST00000507247 KDM4FA0A1W2PPD8 638 aa21.42■■□□□ 1.02
RNF4-208ENST00000507247 NCOA1Q15788 1441 aa21.42■■□□□ 1.02
RNF4-208ENST00000507247 GCC2Q8IWJ2 1684 aa21.42■■□□□ 1.02
RNF4-208ENST00000507247 ABCA6Q8N139 1617 aa21.42■■□□□ 1.02
RNF4-208ENST00000507247 ANKRD30AQ9BXX3 1397 aa21.4■■□□□ 1.02
RNF4-208ENST00000507247 RRP7BPQ9NSQ0 103 aa21.4■■□□□ 1.02
RNF4-208ENST00000507247 DIP2CQ9Y2E4 1556 aa21.39■■□□□ 1.01
RNF4-208ENST00000507247 YEATS2Q9ULM3 1422 aa21.38■■□□□ 1.01
RNF4-208ENST00000507247 MAGI2Q86UL8 1455 aa21.38■■□□□ 1.01
RNF4-208ENST00000507247 HFM1A2PYH4 1435 aa21.38■■□□□ 1.01
RNF4-208ENST00000507247 NAIPQ13075 1403 aa21.38■■□□□ 1.01
RNF4-208ENST00000507247 KIF15Q9NS87 1388 aa21.36■■□□□ 1.01
RNF4-208ENST00000507247 MYT1LQ9UL68 1186 aa21.36■■□□□ 1.01
RNF4-208ENST00000507247 ARHGEF40Q8TER5 1519 aa21.35■■□□□ 1.01
RNF4-208ENST00000507247 DUOX2Q9NRD8 1548 aa21.33■■□□□ 1
RNF4-208ENST00000507247 SETD5Q9C0A6 1442 aa21.31■■□□□ 1
RNF4-208ENST00000507247 A2MP01023 1474 aa21.29■■□□□ 1
RNF4-208ENST00000507247 SIGLEC1Q9BZZ2 1709 aa21.29■■□□□ 1
RNF4-208ENST00000507247 ANKRD50Q9ULJ7 1429 aa21.29■■□□□ 1
RNF4-208ENST00000507247 REREQ9P2R6 1566 aa21.27■■□□□ 1
RNF4-208ENST00000507247 ATP10AO60312 1499 aa21.27■■□□□ 1
RNF4-208ENST00000507247 ERBINQ96RT1 1412 aa21.27■■□□□ 1
RNF4-208ENST00000507247 DHX29Q7Z478 1369 aaKnown RBP21.26■□□□□ 0.99
RNF4-208ENST00000507247 RAB3GAP2Q9H2M9 1393 aa21.26■□□□□ 0.99
RNF4-208ENST00000507247 EIF2AK4Q9P2K8 1649 aaKnown RBP21.26■□□□□ 0.99
RNF4-208ENST00000507247 BCORL1Q5H9F3 1711 aa21.24■□□□□ 0.99
RNF4-208ENST00000507247 UNC13BO14795 1591 aa21.19■□□□□ 0.98
RNF4-208ENST00000507247 DEPDC5O75140 1603 aa21.19■□□□□ 0.98
RNF4-208ENST00000507247 AGLP35573 1532 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms