RNA–Protein interactions for RNA: ENST00000507017.5

SFXN1-206, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-206ENST00000507017 SCAPERQ9BY12 1400 aa12.2□□□□□ -0.46
SFXN1-206ENST00000507017 MTUS2Q5JR59 1369 aa12.19□□□□□ -0.46
SFXN1-206ENST00000507017 PREX2Q70Z35 1606 aa12.19□□□□□ -0.46
SFXN1-206ENST00000507017 FRMPD1Q5SYB0 1578 aa12.19□□□□□ -0.46
SFXN1-206ENST00000507017 KDM4FA0A1W2PPD8 638 aa12.19□□□□□ -0.46
SFXN1-206ENST00000507017 RAPGEF3O95398 923 aa12.19□□□□□ -0.46
SFXN1-206ENST00000507017 ZFYVE16Q7Z3T8 1539 aa12.19□□□□□ -0.46
SFXN1-206ENST00000507017 EHBP1L1Q8N3D4 1523 aa12.17□□□□□ -0.46
SFXN1-206ENST00000507017 PLEKHH2Q8IVE3 1493 aa12.17□□□□□ -0.46
SFXN1-206ENST00000507017 ARID4BQ4LE39 1312 aaPredicted RBP12.16□□□□□ -0.46
SFXN1-206ENST00000507017 CCNB3Q8WWL7 1395 aa12.15□□□□□ -0.46
SFXN1-206ENST00000507017 ITSN2Q9NZM3 1697 aa12.14□□□□□ -0.47
SFXN1-206ENST00000507017 VPS8Q8N3P4 1428 aa12.13□□□□□ -0.47
SFXN1-206ENST00000507017 MYT1LQ9UL68 1186 aa12.13□□□□□ -0.47
SFXN1-206ENST00000507017 CDC42BPBQ9Y5S2 1711 aa12.13□□□□□ -0.47
SFXN1-206ENST00000507017 KDM5CP41229 1560 aa12.13□□□□□ -0.47
SFXN1-206ENST00000507017 HECW2Q9P2P5 1572 aa12.13□□□□□ -0.47
SFXN1-206ENST00000507017 C9orf84Q5VXU9 1444 aa12.12□□□□□ -0.47
SFXN1-206ENST00000507017 ABCC1P33527 1531 aa12.12□□□□□ -0.47
SFXN1-206ENST00000507017 BCORL1Q5H9F3 1711 aa12.11□□□□□ -0.47
SFXN1-206ENST00000507017 CDC42BPAQ5VT25 1732 aa12.11□□□□□ -0.47
SFXN1-206ENST00000507017 ATP10AO60312 1499 aa12.11□□□□□ -0.47
SFXN1-206ENST00000507017 ADAMTSL3P82987 1691 aa12.1□□□□□ -0.47
SFXN1-206ENST00000507017 MLH3Q9UHC1 1453 aa12.1□□□□□ -0.47
SFXN1-206ENST00000507017 CFDP1Q9UEE9 299 aaPredicted RBP12.1□□□□□ -0.47
SFXN1-206ENST00000507017 SUPT6HQ7KZ85 1726 aaKnown RBP12.1□□□□□ -0.47
SFXN1-206ENST00000507017 KIAA1107Q9UPP5 1409 aa12.1□□□□□ -0.47
SFXN1-206ENST00000507017 APLP2Q06481 763 aa12.09□□□□□ -0.47
SFXN1-206ENST00000507017 MAP3K1Q13233 1512 aa12.09□□□□□ -0.47
SFXN1-206ENST00000507017 TIAM1Q13009 1591 aa12.09□□□□□ -0.47
SFXN1-206ENST00000507017 REREQ9P2R6 1566 aa12.09□□□□□ -0.47
SFXN1-206ENST00000507017 GPATCH8Q9UKJ3 1502 aaKnown RBP12.08□□□□□ -0.48
SFXN1-206ENST00000507017 YEATS2Q9ULM3 1422 aa12.07□□□□□ -0.48
SFXN1-206ENST00000507017 ZNF777Q9ULD5 760 aaPredicted RBP12.06□□□□□ -0.48
SFXN1-206ENST00000507017 PTPRMP28827 1452 aa12.06□□□□□ -0.48
SFXN1-206ENST00000507017 RSPH4AQ5TD94 716 aa12.05□□□□□ -0.48
SFXN1-206ENST00000507017 SENP3Q9H4L4 574 aaPredicted RBP12.05□□□□□ -0.48
SFXN1-206ENST00000507017 SYCP2Q9BX26 1530 aa12.05□□□□□ -0.48
SFXN1-206ENST00000507017 SAMD9LQ8IVG5 1584 aa12.05□□□□□ -0.48
SFXN1-206ENST00000507017 MADDQ8WXG6 1647 aa12.04□□□□□ -0.48
SFXN1-206ENST00000507017 LOC105371045A0A1W2PR82 267 aa12.04□□□□□ -0.48
SFXN1-206ENST00000507017 AFAP1Q8N556 730 aa12.04□□□□□ -0.48
SFXN1-206ENST00000507017 ESF1Q9H501 851 aaKnown RBP12.04□□□□□ -0.48
SFXN1-206ENST00000507017 AGLP35573 1532 aa12.04□□□□□ -0.48
SFXN1-206ENST00000507017 SPAG9O60271 1321 aaKnown RBP12.04□□□□□ -0.48
SFXN1-206ENST00000507017 DIP2CQ9Y2E4 1556 aa12.04□□□□□ -0.48
SFXN1-206ENST00000507017 NCOA2Q15596 1464 aa12.03□□□□□ -0.48
SFXN1-206ENST00000507017 TRAPPC8Q9Y2L5 1435 aa12.03□□□□□ -0.48
SFXN1-206ENST00000507017 FER1L4A9Z1Z3 1794 aa12.02□□□□□ -0.48
SFXN1-206ENST00000507017 LRRC9Q6ZRR7 1453 aa12.02□□□□□ -0.48
SFXN1-206ENST00000507017 RIMS1Q86UR5 1692 aaKnown RBP12.02□□□□□ -0.49
SFXN1-206ENST00000507017 ATP7AQ04656 1500 aa12.01□□□□□ -0.49
SFXN1-206ENST00000507017 ABCA6Q8N139 1617 aa12.01□□□□□ -0.49
SFXN1-206ENST00000507017 CNTLNQ9NXG0 1405 aa12.01□□□□□ -0.49
SFXN1-206ENST00000507017 ARHGEF12Q9NZN5 1544 aa12.01□□□□□ -0.49
SFXN1-206ENST00000507017 KIDINS220Q9ULH0 1771 aa12□□□□□ -0.49
SFXN1-206ENST00000507017 RTEL1-TNFRSF6BF6WH68 1400 aa11.99□□□□□ -0.49
SFXN1-206ENST00000507017 CCDC141Q6ZP82 1450 aa11.99□□□□□ -0.49
SFXN1-206ENST00000507017 INO80Q9ULG1 1556 aaPredicted RBP11.99□□□□□ -0.49
SFXN1-206ENST00000507017 ADGBQ8N7X0 1667 aa11.98□□□□□ -0.49
SFXN1-206ENST00000507017 MIA2Q96PC5 1412 aa11.98□□□□□ -0.49
SFXN1-206ENST00000507017 MLECQ14165 292 aa11.98□□□□□ -0.49
SFXN1-206ENST00000507017 CAMSAP2Q08AD1 1489 aa11.97□□□□□ -0.49
SFXN1-206ENST00000507017 HNRNPMP52272 730 aaKnown RBP eCLIP11.97□□□□□ -0.49
SFXN1-206ENST00000507017 TSPY4P0CV99 314 aa11.96□□□□□ -0.49
SFXN1-206ENST00000507017 TSPY10P0CW01 314 aa11.96□□□□□ -0.49
SFXN1-206ENST00000507017 PPP6R1Q9UPN7 881 aa11.96□□□□□ -0.49
SFXN1-206ENST00000507017 ARHGEF5Q12774 1597 aa11.96□□□□□ -0.5
SFXN1-206ENST00000507017 A2MP01023 1474 aa11.95□□□□□ -0.5
SFXN1-206ENST00000507017 MYOM3Q5VTT5 1437 aa11.95□□□□□ -0.5
SFXN1-206ENST00000507017 FAM135AQ9P2D6 1515 aa11.95□□□□□ -0.5
SFXN1-206ENST00000507017 MBD5Q9P267 1494 aa11.94□□□□□ -0.5
SFXN1-206ENST00000507017 SIGLEC1Q9BZZ2 1709 aa11.94□□□□□ -0.5
SFXN1-206ENST00000507017 PLXNC1O60486 1568 aa11.93□□□□□ -0.5
SFXN1-206ENST00000507017 MROH2AA6NES4 1674 aa11.93□□□□□ -0.5
SFXN1-206ENST00000507017 PREX1Q8TCU6 1659 aa11.91□□□□□ -0.5
SFXN1-206ENST00000507017 PHF23Q9BUL5 403 aaPredicted RBP11.91□□□□□ -0.5
SFXN1-206ENST00000507017 UHRF1BP1Q6BDS2 1440 aa11.91□□□□□ -0.5
SFXN1-206ENST00000507017 SETD1BQ9UPS6 1966 aaKnown RBP11.9□□□□□ -0.5
SFXN1-206ENST00000507017 DHX29Q7Z478 1369 aaKnown RBP11.9□□□□□ -0.5
SFXN1-206ENST00000507017 LMTK3Q96Q04 1460 aa11.89□□□□□ -0.51
SFXN1-206ENST00000507017 ZNF644Q9H582 1327 aaPredicted RBP11.89□□□□□ -0.51
SFXN1-206ENST00000507017 MAST1Q9Y2H9 1570 aa11.89□□□□□ -0.51
SFXN1-206ENST00000507017 NPATQ14207 1427 aa11.89□□□□□ -0.51
SFXN1-206ENST00000507017 PLPPR3Q6T4P5 718 aa11.88□□□□□ -0.51
SFXN1-206ENST00000507017 SHANK2Q9UPX8 1470 aa11.88□□□□□ -0.51
SFXN1-206ENST00000507017 KANK4Q5T7N3 995 aaPredicted RBP11.86□□□□□ -0.51
SFXN1-206ENST00000507017 C3P01024 1663 aa11.86□□□□□ -0.51
SFXN1-206ENST00000507017 PTPN23Q9H3S7 1636 aa11.86□□□□□ -0.51
SFXN1-206ENST00000507017 EIF2AK4Q9P2K8 1649 aaKnown RBP11.86□□□□□ -0.51
SFXN1-206ENST00000507017 GGT6Q6P531 493 aa11.85□□□□□ -0.51
SFXN1-206ENST00000507017 DMRT2Q9Y5R5 561 aa11.85□□□□□ -0.51
SFXN1-206ENST00000507017 KDM5DQ9BY66 1539 aa11.85□□□□□ -0.51
SFXN1-206ENST00000507017 FGD6Q6ZV73 1430 aa11.85□□□□□ -0.51
SFXN1-206ENST00000507017 TCOF1Q13428 1488 aaKnown RBP11.83□□□□□ -0.52
SFXN1-206ENST00000507017 ZMYM3Q14202 1370 aa11.83□□□□□ -0.52
SFXN1-206ENST00000507017 DUOX2Q9NRD8 1548 aa11.83□□□□□ -0.52
SFXN1-206ENST00000507017 KIF3BO15066 747 aa11.83□□□□□ -0.52
SFXN1-206ENST00000507017 CROCC2H7BZ55 1655 aa11.83□□□□□ -0.52
SFXN1-206ENST00000507017 CLTCQ00610 1675 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms