RNA–Protein interactions for RNA: ENST00000506188.5

SNHG4-203, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-203ENST00000506188 ZNF777Q9ULD5 760 aaPredicted RBP22.19■■□□□ 1.14
SNHG4-203ENST00000506188 POGZQ7Z3K3 1410 aa22.19■■□□□ 1.14
SNHG4-203ENST00000506188 CCNB3Q8WWL7 1395 aa22.18■■□□□ 1.14
SNHG4-203ENST00000506188 CFDP1Q9UEE9 299 aaPredicted RBP22.18■■□□□ 1.14
SNHG4-203ENST00000506188 MYO5CQ9NQX4 1742 aa22.17■■□□□ 1.14
SNHG4-203ENST00000506188 ZNF518AQ6AHZ1 1483 aa22.15■■□□□ 1.14
SNHG4-203ENST00000506188 AFAP1Q8N556 730 aa22.15■■□□□ 1.14
SNHG4-203ENST00000506188 FRMPD1Q5SYB0 1578 aa22.13■■□□□ 1.13
SNHG4-203ENST00000506188 ZFYVE16Q7Z3T8 1539 aa22.13■■□□□ 1.13
SNHG4-203ENST00000506188 APLP2Q06481 763 aa22.13■■□□□ 1.13
SNHG4-203ENST00000506188 ZMYM4Q5VZL5 1548 aa22.12■■□□□ 1.13
SNHG4-203ENST00000506188 LRRIQ1Q96JM4 1722 aa22.1■■□□□ 1.13
SNHG4-203ENST00000506188 ARHGEF40Q8TER5 1519 aa22.1■■□□□ 1.13
SNHG4-203ENST00000506188 VPS8Q8N3P4 1428 aa22.09■■□□□ 1.13
SNHG4-203ENST00000506188 RICTORQ6R327 1708 aa22.09■■□□□ 1.13
SNHG4-203ENST00000506188 YEATS2Q9ULM3 1422 aa22.08■■□□□ 1.13
SNHG4-203ENST00000506188 ATP10AO60312 1499 aa22.08■■□□□ 1.12
SNHG4-203ENST00000506188 GPATCH8Q9UKJ3 1502 aaKnown RBP22.07■■□□□ 1.12
SNHG4-203ENST00000506188 MLECQ14165 292 aa22.06■■□□□ 1.12
SNHG4-203ENST00000506188 PLEKHH2Q8IVE3 1493 aa22.06■■□□□ 1.12
SNHG4-203ENST00000506188 EHBP1L1Q8N3D4 1523 aa22.05■■□□□ 1.12
SNHG4-203ENST00000506188 PREX2Q70Z35 1606 aa22.04■■□□□ 1.12
SNHG4-203ENST00000506188 C9orf84Q5VXU9 1444 aa22.04■■□□□ 1.12
SNHG4-203ENST00000506188 HNRNPMP52272 730 aaKnown RBP eCLIP22.03■■□□□ 1.12
SNHG4-203ENST00000506188 ESF1Q9H501 851 aaKnown RBP22.03■■□□□ 1.12
SNHG4-203ENST00000506188 SPAG9O60271 1321 aaKnown RBP22.03■■□□□ 1.12
SNHG4-203ENST00000506188 KIAA1107Q9UPP5 1409 aa22.01■■□□□ 1.11
SNHG4-203ENST00000506188 MLH3Q9UHC1 1453 aa22.01■■□□□ 1.11
SNHG4-203ENST00000506188 TRAPPC8Q9Y2L5 1435 aa22■■□□□ 1.11
SNHG4-203ENST00000506188 ABCC1P33527 1531 aa22■■□□□ 1.11
SNHG4-203ENST00000506188 PTPRMP28827 1452 aa21.99■■□□□ 1.11
SNHG4-203ENST00000506188 CDC42BPBQ9Y5S2 1711 aa21.98■■□□□ 1.11
SNHG4-203ENST00000506188 RSPH4AQ5TD94 716 aa21.98■■□□□ 1.11
SNHG4-203ENST00000506188 KDM5CP41229 1560 aa21.97■■□□□ 1.11
SNHG4-203ENST00000506188 PLPPR3Q6T4P5 718 aa21.96■■□□□ 1.11
SNHG4-203ENST00000506188 ARHGEF12Q9NZN5 1544 aa21.96■■□□□ 1.11
SNHG4-203ENST00000506188 HECW2Q9P2P5 1572 aa21.95■■□□□ 1.1
SNHG4-203ENST00000506188 BCORL1Q5H9F3 1711 aa21.94■■□□□ 1.1
SNHG4-203ENST00000506188 ADAMTSL3P82987 1691 aa21.94■■□□□ 1.1
SNHG4-203ENST00000506188 TIAM1Q13009 1591 aa21.93■■□□□ 1.1
SNHG4-203ENST00000506188 NCOA2Q15596 1464 aa21.93■■□□□ 1.1
SNHG4-203ENST00000506188 CDC42BPAQ5VT25 1732 aa21.93■■□□□ 1.1
SNHG4-203ENST00000506188 MAP3K1Q13233 1512 aa21.91■■□□□ 1.1
SNHG4-203ENST00000506188 SYCP2Q9BX26 1530 aa21.91■■□□□ 1.1
SNHG4-203ENST00000506188 LRRC9Q6ZRR7 1453 aa21.91■■□□□ 1.1
SNHG4-203ENST00000506188 ZNF644Q9H582 1327 aaPredicted RBP21.91■■□□□ 1.1
SNHG4-203ENST00000506188 TSPY4P0CV99 314 aa21.9■■□□□ 1.1
SNHG4-203ENST00000506188 TSPY10P0CW01 314 aa21.9■■□□□ 1.1
SNHG4-203ENST00000506188 SAMD9LQ8IVG5 1584 aa21.9■■□□□ 1.1
SNHG4-203ENST00000506188 SUPT6HQ7KZ85 1726 aaKnown RBP21.88■■□□□ 1.09
SNHG4-203ENST00000506188 ITSN2Q9NZM3 1697 aa21.88■■□□□ 1.09
SNHG4-203ENST00000506188 MADDQ8WXG6 1647 aa21.88■■□□□ 1.09
SNHG4-203ENST00000506188 KANK4Q5T7N3 995 aaPredicted RBP21.87■■□□□ 1.09
SNHG4-203ENST00000506188 DIP2CQ9Y2E4 1556 aa21.85■■□□□ 1.09
SNHG4-203ENST00000506188 REREQ9P2R6 1566 aa21.84■■□□□ 1.09
SNHG4-203ENST00000506188 AGLP35573 1532 aa21.83■■□□□ 1.09
SNHG4-203ENST00000506188 RTEL1-TNFRSF6BF6WH68 1400 aa21.81■■□□□ 1.08
SNHG4-203ENST00000506188 ATP7AQ04656 1500 aa21.8■■□□□ 1.08
SNHG4-203ENST00000506188 RIMS1Q86UR5 1692 aaKnown RBP21.8■■□□□ 1.08
SNHG4-203ENST00000506188 MBD5Q9P267 1494 aa21.8■■□□□ 1.08
SNHG4-203ENST00000506188 PPP6R1Q9UPN7 881 aa21.79■■□□□ 1.08
SNHG4-203ENST00000506188 ABCA6Q8N139 1617 aa21.79■■□□□ 1.08
SNHG4-203ENST00000506188 MIA2Q96PC5 1412 aa21.79■■□□□ 1.08
SNHG4-203ENST00000506188 CNTLNQ9NXG0 1405 aa21.79■■□□□ 1.08
SNHG4-203ENST00000506188 A2MP01023 1474 aa21.78■■□□□ 1.08
SNHG4-203ENST00000506188 CAMSAP2Q08AD1 1489 aa21.78■■□□□ 1.08
SNHG4-203ENST00000506188 CCDC141Q6ZP82 1450 aa21.78■■□□□ 1.08
SNHG4-203ENST00000506188 CEBPAP49715 358 aaPredicted RBP21.78■■□□□ 1.08
SNHG4-203ENST00000506188 GGT6Q6P531 493 aa21.78■■□□□ 1.08
SNHG4-203ENST00000506188 MYOM3Q5VTT5 1437 aa21.77■■□□□ 1.08
SNHG4-203ENST00000506188 KIDINS220Q9ULH0 1771 aa21.76■■□□□ 1.07
SNHG4-203ENST00000506188 DHX29Q7Z478 1369 aaKnown RBP21.74■■□□□ 1.07
SNHG4-203ENST00000506188 FER1L4A9Z1Z3 1794 aa21.72■■□□□ 1.07
SNHG4-203ENST00000506188 SIGLEC1Q9BZZ2 1709 aa21.72■■□□□ 1.07
SNHG4-203ENST00000506188 KIF3BO15066 747 aa21.71■■□□□ 1.07
SNHG4-203ENST00000506188 INO80Q9ULG1 1556 aaPredicted RBP21.7■■□□□ 1.06
SNHG4-203ENST00000506188 HSPA2P54652 639 aa21.68■■□□□ 1.06
SNHG4-203ENST00000506188 LMTK3Q96Q04 1460 aa21.67■■□□□ 1.06
SNHG4-203ENST00000506188 ARHGEF5Q12774 1597 aa21.66■■□□□ 1.06
SNHG4-203ENST00000506188 UHRF1BP1Q6BDS2 1440 aa21.66■■□□□ 1.06
SNHG4-203ENST00000506188 ZMYM3Q14202 1370 aa21.66■■□□□ 1.06
SNHG4-203ENST00000506188 DMRT2Q9Y5R5 561 aa21.64■■□□□ 1.05
SNHG4-203ENST00000506188 WASHC2CQ9Y4E1 1318 aa21.63■■□□□ 1.05
SNHG4-203ENST00000506188 ADGBQ8N7X0 1667 aa21.63■■□□□ 1.05
SNHG4-203ENST00000506188 PLXNC1O60486 1568 aa21.62■■□□□ 1.05
SNHG4-203ENST00000506188 NPATQ14207 1427 aa21.59■■□□□ 1.05
SNHG4-203ENST00000506188 FAM50AQ14320 339 aaKnown RBP21.59■■□□□ 1.05
SNHG4-203ENST00000506188 FGD6Q6ZV73 1430 aa21.59■■□□□ 1.05
SNHG4-203ENST00000506188 RRP7BPQ9NSQ0 103 aa21.55■■□□□ 1.04
SNHG4-203ENST00000506188 ANKRD30AQ9BXX3 1397 aa21.53■■□□□ 1.04
SNHG4-203ENST00000506188 MAST1Q9Y2H9 1570 aa21.53■■□□□ 1.04
SNHG4-203ENST00000506188 PTPN23Q9H3S7 1636 aa21.52■■□□□ 1.04
SNHG4-203ENST00000506188 KIF15Q9NS87 1388 aa21.52■■□□□ 1.04
SNHG4-203ENST00000506188 CHIC2Q9UKJ5 165 aa21.52■■□□□ 1.04
SNHG4-203ENST00000506188 PREX1Q8TCU6 1659 aa21.52■■□□□ 1.04
SNHG4-203ENST00000506188 ABCC5O15440 1437 aa21.52■■□□□ 1.04
SNHG4-203ENST00000506188 TCOF1Q13428 1488 aaKnown RBP21.51■■□□□ 1.03
SNHG4-203ENST00000506188 SHANK2Q9UPX8 1470 aa21.51■■□□□ 1.03
SNHG4-203ENST00000506188 FAM135AQ9P2D6 1515 aa21.5■■□□□ 1.03
SNHG4-203ENST00000506188 DAPK1P53355 1430 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms