RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 UBTFP17480 764 aaKnown RBP3.59□□□□□ -1.84
NEDD4-205ENST00000506154 ABCC2Q92887 1545 aa3.58□□□□□ -1.84
NEDD4-205ENST00000506154 KIF13AQ9H1H9 1805 aa3.58□□□□□ -1.84
NEDD4-205ENST00000506154 ZNF518AQ6AHZ1 1483 aa3.58□□□□□ -1.84
NEDD4-205ENST00000506154 FYCO1Q9BQS8 1478 aa3.58□□□□□ -1.84
NEDD4-205ENST00000506154 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.58□□□□□ -1.84
NEDD4-205ENST00000506154 KDM5DQ9BY66 1539 aa3.58□□□□□ -1.84
NEDD4-205ENST00000506154 GOLGA3Q08378 1498 aa3.58□□□□□ -1.84
NEDD4-205ENST00000506154 PREX2Q70Z35 1606 aa3.57□□□□□ -1.84
NEDD4-205ENST00000506154 INO80Q9ULG1 1556 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-205ENST00000506154 SPDYE4A6NLX3 237 aa3.57□□□□□ -1.84
NEDD4-205ENST00000506154 KIF27Q86VH2 1401 aa3.57□□□□□ -1.84
NEDD4-205ENST00000506154 RAPGEF6Q8TEU7 1601 aa3.57□□□□□ -1.84
NEDD4-205ENST00000506154 ABCB7O75027 752 aa3.57□□□□□ -1.84
NEDD4-205ENST00000506154 ZMYM4Q5VZL5 1548 aa3.57□□□□□ -1.84
NEDD4-205ENST00000506154 RGL2O15211 777 aa3.57□□□□□ -1.84
NEDD4-205ENST00000506154 CDC42BPBQ9Y5S2 1711 aa3.57□□□□□ -1.84
NEDD4-205ENST00000506154 GCC2Q8IWJ2 1684 aa3.56□□□□□ -1.84
NEDD4-205ENST00000506154 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.56□□□□□ -1.842e-6■■□□□ 14.1
NEDD4-205ENST00000506154 ARHGEF5Q12774 1597 aa3.56□□□□□ -1.84
NEDD4-205ENST00000506154 CASKIN1Q8WXD9 1431 aa3.56□□□□□ -1.84
NEDD4-205ENST00000506154 WDR7Q9Y4E6 1490 aa3.56□□□□□ -1.84
NEDD4-205ENST00000506154 ATP1B4Q9UN42 357 aaPredicted RBP3.56□□□□□ -1.84
NEDD4-205ENST00000506154 ZCCHC11Q5TAX3 1644 aaKnown RBP3.56□□□□□ -1.84
NEDD4-205ENST00000506154 AKNAQ7Z591 1439 aa3.55□□□□□ -1.84
NEDD4-205ENST00000506154 RRBP1Q9P2E9 1410 aaKnown RBP3.55□□□□□ -1.84
NEDD4-205ENST00000506154 CAMSAP2Q08AD1 1489 aa3.55□□□□□ -1.84
NEDD4-205ENST00000506154 RIMBP3CA6NJZ7 1639 aa3.55□□□□□ -1.84
NEDD4-205ENST00000506154 RIMBP3BA6NNM3 1639 aa3.55□□□□□ -1.84
NEDD4-205ENST00000506154 RIMBP3Q9UFD9 1639 aa3.55□□□□□ -1.84
NEDD4-205ENST00000506154 ADGRL2O95490 1459 aa3.54□□□□□ -1.84
NEDD4-205ENST00000506154 RICTORQ6R327 1708 aa3.54□□□□□ -1.84
NEDD4-205ENST00000506154 RNF17Q9BXT8 1623 aaKnown RBP3.54□□□□□ -1.84
NEDD4-205ENST00000506154 ITSN2Q9NZM3 1697 aa3.54□□□□□ -1.84
NEDD4-205ENST00000506154 DIP2BQ9P265 1576 aa3.54□□□□□ -1.84
NEDD4-205ENST00000506154 RNF216Q9NWF9 866 aaPredicted RBP3.54□□□□□ -1.84
NEDD4-205ENST00000506154 ACIN1Q9UKV3 1341 aaKnown RBP3.54□□□□□ -1.84
NEDD4-205ENST00000506154 UNC13BO14795 1591 aa3.53□□□□□ -1.84
NEDD4-205ENST00000506154 FAM135AQ9P2D6 1515 aa3.53□□□□□ -1.84
NEDD4-205ENST00000506154 HOXD11P31277 338 aaPredicted RBP3.53□□□□□ -1.84
NEDD4-205ENST00000506154 RANGAP1P46060 587 aaPredicted RBP3.53□□□□□ -1.84
NEDD4-205ENST00000506154 VASPP50552 380 aaPredicted RBP3.53□□□□□ -1.84
NEDD4-205ENST00000506154 VPS8Q8N3P4 1428 aa3.53□□□□□ -1.84
NEDD4-205ENST00000506154 HECW1Q76N89 1606 aa3.53□□□□□ -1.84
NEDD4-205ENST00000506154 PKD2Q13563 968 aa3.53□□□□□ -1.84
NEDD4-205ENST00000506154 MBD5Q9P267 1494 aa3.53□□□□□ -1.84
NEDD4-205ENST00000506154 CLIP1P30622 1438 aa3.53□□□□□ -1.84
NEDD4-205ENST00000506154 ADGBQ8N7X0 1667 aa3.53□□□□□ -1.84
NEDD4-205ENST00000506154 TRIM26Q12899 539 aaPredicted RBP3.52□□□□□ -1.85
NEDD4-205ENST00000506154 ANP32EQ9BTT0 268 aa3.52□□□□□ -1.85
NEDD4-205ENST00000506154 SHANK2Q9UPX8 1470 aa3.52□□□□□ -1.85
NEDD4-205ENST00000506154 DNMT1P26358 1616 aaKnown RBP3.52□□□□□ -1.85
NEDD4-205ENST00000506154 ABCA6Q8N139 1617 aa3.52□□□□□ -1.85
NEDD4-205ENST00000506154 PTPRGP23470 1445 aa3.52□□□□□ -1.85
NEDD4-205ENST00000506154 TTC37Q6PGP7 1564 aa3.52□□□□□ -1.85
NEDD4-205ENST00000506154 KDM5AP29375 1690 aaKnown RBP3.52□□□□□ -1.85
NEDD4-205ENST00000506154 EIF2AK4Q9P2K8 1649 aaKnown RBP3.52□□□□□ -1.85
NEDD4-205ENST00000506154 CEP162Q5TB80 1403 aa3.52□□□□□ -1.85
NEDD4-205ENST00000506154 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.52□□□□□ -1.85
NEDD4-205ENST00000506154 KIF14Q15058 1648 aa3.52□□□□□ -1.85
NEDD4-205ENST00000506154 PIK3C2BO00750 1634 aa3.51□□□□□ -1.85
NEDD4-205ENST00000506154 IFT172Q9UG01 1749 aa3.51□□□□□ -1.85
NEDD4-205ENST00000506154 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.51□□□□□ -1.85
NEDD4-205ENST00000506154 SAMD9LQ8IVG5 1584 aa3.51□□□□□ -1.85
NEDD4-205ENST00000506154 LMTK2Q8IWU2 1503 aa3.51□□□□□ -1.85
NEDD4-205ENST00000506154 PPARGC1BQ86YN6 1023 aaKnown RBP3.51□□□□□ -1.85
NEDD4-205ENST00000506154 EHBP1L1Q8N3D4 1523 aa3.5□□□□□ -1.85
NEDD4-205ENST00000506154 ABCC1P33527 1531 aa3.5□□□□□ -1.85
NEDD4-205ENST00000506154 NPM2Q86SE8 214 aaKnown RBP3.5□□□□□ -1.85
NEDD4-205ENST00000506154 EPRSP07814 1512 aaKnown RBP3.5□□□□□ -1.85
NEDD4-205ENST00000506154 PLCD3Q8N3E9 789 aa3.5□□□□□ -1.85
NEDD4-205ENST00000506154 PLB1Q6P1J6 1458 aa3.5□□□□□ -1.85
NEDD4-205ENST00000506154 SETD1AO15047 1707 aaKnown RBP3.5□□□□□ -1.85
NEDD4-205ENST00000506154 ARXQ96QS3 562 aa3.5□□□□□ -1.85
NEDD4-205ENST00000506154 ARHGEF12Q9NZN5 1544 aa3.49□□□□□ -1.85
NEDD4-205ENST00000506154 ATP10AO60312 1499 aa3.49□□□□□ -1.85
NEDD4-205ENST00000506154 TMEM132AQ24JP5 1023 aa3.49□□□□□ -1.85
NEDD4-205ENST00000506154 PRAG1Q86YV5 1406 aa3.49□□□□□ -1.85
NEDD4-205ENST00000506154 CARMIL1Q5VZK9 1371 aa3.49□□□□□ -1.85
NEDD4-205ENST00000506154 ERCC6Q03468 1493 aa3.49□□□□□ -1.85
NEDD4-205ENST00000506154 LRRC9Q6ZRR7 1453 aa3.49□□□□□ -1.85
NEDD4-205ENST00000506154 EIF5BO60841 1220 aaKnown RBP3.49□□□□□ -1.85
NEDD4-205ENST00000506154 MYCNP04198 464 aaPredicted RBP3.49□□□□□ -1.85
NEDD4-205ENST00000506154 NEUROD2Q15784 382 aa3.49□□□□□ -1.85
NEDD4-205ENST00000506154 DMRT2Q9Y5R5 561 aa3.48□□□□□ -1.85
NEDD4-205ENST00000506154 CCDC18Q5T9S5 1454 aa3.48□□□□□ -1.85
NEDD4-205ENST00000506154 PRDM15P57071 1507 aaPredicted RBP3.48□□□□□ -1.85
NEDD4-205ENST00000506154 ATP10BO94823 1461 aa3.48□□□□□ -1.85
NEDD4-205ENST00000506154 HOMEZQ8IX15 550 aa3.48□□□□□ -1.85
NEDD4-205ENST00000506154 ZNF428Q96B54 188 aa3.48□□□□□ -1.85
NEDD4-205ENST00000506154 NEUROD1Q13562 356 aa3.48□□□□□ -1.85
NEDD4-205ENST00000506154 KIDINS220Q9ULH0 1771 aa3.47□□□□□ -1.85
NEDD4-205ENST00000506154 ZFYVE16Q7Z3T8 1539 aa3.47□□□□□ -1.85
NEDD4-205ENST00000506154 CENPBP07199 599 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-205ENST00000506154 MADDQ8WXG6 1647 aa3.47□□□□□ -1.85
NEDD4-205ENST00000506154 KDM6BO15054 1643 aa3.47□□□□□ -1.85
NEDD4-205ENST00000506154 IQGAP3Q86VI3 1631 aa3.47□□□□□ -1.85
NEDD4-205ENST00000506154 AGLP35573 1532 aa3.47□□□□□ -1.85
NEDD4-205ENST00000506154 PTPN23Q9H3S7 1636 aa3.46□□□□□ -1.85
NEDD4-205ENST00000506154 IL27Q8NEV9 243 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms