RNA–Protein interactions for RNA: ENST00000504465.5

CAST-213, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-213ENST00000504465 PBRM1Q86U86 1689 aa12.49□□□□□ -0.41
CAST-213ENST00000504465 ABCC5O15440 1437 aa12.49□□□□□ -0.41
CAST-213ENST00000504465 NCOA1Q15788 1441 aa12.49□□□□□ -0.41
CAST-213ENST00000504465 DAPK1P53355 1430 aa12.49□□□□□ -0.41
CAST-213ENST00000504465 CCDC7Q96M83 1385 aa12.48□□□□□ -0.41
CAST-213ENST00000504465 ZNF644Q9H582 1327 aaPredicted RBP12.47□□□□□ -0.41
CAST-213ENST00000504465 RPRD2Q5VT52 1461 aaKnown RBP12.47□□□□□ -0.41
CAST-213ENST00000504465 TEX14Q8IWB6 1497 aa12.46□□□□□ -0.41
CAST-213ENST00000504465 PRKRIP1Q9H875 184 aaPredicted RBP12.46□□□□□ -0.41
CAST-213ENST00000504465 SPATA31E1Q6ZUB1 1445 aa12.46□□□□□ -0.42
CAST-213ENST00000504465 DISP1Q96F81 1524 aa12.46□□□□□ -0.42
CAST-213ENST00000504465 NUP153P49790 1475 aaKnown RBP12.44□□□□□ -0.42
CAST-213ENST00000504465 IRX6P78412 446 aaPredicted RBP12.44□□□□□ -0.42
CAST-213ENST00000504465 MRC2Q9UBG0 1479 aa12.43□□□□□ -0.42
CAST-213ENST00000504465 KIAA0586Q9BVV6 1533 aa12.43□□□□□ -0.42
CAST-213ENST00000504465 ZNF608Q9ULD9 1512 aaPredicted RBP12.43□□□□□ -0.42
CAST-213ENST00000504465 DNMT1P26358 1616 aaKnown RBP12.43□□□□□ -0.42
CAST-213ENST00000504465 KIF7Q2M1P5 1343 aa12.42□□□□□ -0.42
CAST-213ENST00000504465 SLC4A1APQ9BWU0 796 aaKnown RBP12.41□□□□□ -0.42
CAST-213ENST00000504465 KIAA0556O60303 1618 aa12.41□□□□□ -0.42
CAST-213ENST00000504465 PZPP20742 1482 aa12.4□□□□□ -0.42
CAST-213ENST00000504465 ERICH6BQ5W0A0 696 aa12.39□□□□□ -0.43
CAST-213ENST00000504465 MSH5O43196 834 aa12.39□□□□□ -0.43
CAST-213ENST00000504465 IFT140Q96RY7 1462 aa12.39□□□□□ -0.43
CAST-213ENST00000504465 FAM9BQ8IZU0 186 aa12.38□□□□□ -0.43
CAST-213ENST00000504465 MRS2Q9HD23 443 aa12.38□□□□□ -0.43
CAST-213ENST00000504465 PRG4Q92954 1404 aaPredicted RBP12.38□□□□□ -0.43
CAST-213ENST00000504465 ZBED9Q6R2W3 1325 aa12.37□□□□□ -0.43
CAST-213ENST00000504465 RAPGEF6Q8TEU7 1601 aa12.37□□□□□ -0.43
CAST-213ENST00000504465 MBD5Q9P267 1494 aa12.36□□□□□ -0.43
CAST-213ENST00000504465 CDK11AQ9UQ88 783 aaPredicted RBP12.36□□□□□ -0.43
CAST-213ENST00000504465 TROQ12816 1431 aaPredicted RBP12.36□□□□□ -0.43
CAST-213ENST00000504465 PPP4R2Q9NY27 417 aa12.36□□□□□ -0.43
CAST-213ENST00000504465 DHX29Q7Z478 1369 aaKnown RBP12.35□□□□□ -0.43
CAST-213ENST00000504465 CAMSAP2Q08AD1 1489 aa12.35□□□□□ -0.43
CAST-213ENST00000504465 GRIN2AQ12879 1464 aa12.35□□□□□ -0.43
CAST-213ENST00000504465 GPATCH8Q9UKJ3 1502 aaKnown RBP12.35□□□□□ -0.43
CAST-213ENST00000504465 CFDP1Q9UEE9 299 aaPredicted RBP12.34□□□□□ -0.43
CAST-213ENST00000504465 FANCIQ9NVI1 1328 aa12.34□□□□□ -0.43
CAST-213ENST00000504465 KIAA1107Q9UPP5 1409 aa12.33□□□□□ -0.44
CAST-213ENST00000504465 ADGRL2O95490 1459 aa12.33□□□□□ -0.44
CAST-213ENST00000504465 PLB1Q6P1J6 1458 aa12.32□□□□□ -0.44
CAST-213ENST00000504465 PKD2Q13563 968 aa12.31□□□□□ -0.44
CAST-213ENST00000504465 USP47Q96K76 1375 aa12.3□□□□□ -0.44
CAST-213ENST00000504465 POLR1AO95602 1720 aaPredicted RBP12.29□□□□□ -0.44
CAST-213ENST00000504465 KIF14Q15058 1648 aa12.29□□□□□ -0.44
CAST-213ENST00000504465 BCORL1Q5H9F3 1711 aa12.29□□□□□ -0.44
CAST-213ENST00000504465 ZNF777Q9ULD5 760 aaPredicted RBP12.28□□□□□ -0.44
CAST-213ENST00000504465 B4GALNT3Q6L9W6 998 aa12.28□□□□□ -0.44
CAST-213ENST00000504465 ANKRD30AQ9BXX3 1397 aa12.28□□□□□ -0.44
CAST-213ENST00000504465 EIF4G3O43432 1585 aaKnown RBP12.27□□□□□ -0.44
CAST-213ENST00000504465 UHRF1BP1Q6BDS2 1440 aa12.27□□□□□ -0.44
CAST-213ENST00000504465 SMG6Q86US8 1419 aaKnown RBP12.27□□□□□ -0.44
CAST-213ENST00000504465 ADCY10Q96PN6 1610 aa12.27□□□□□ -0.44
CAST-213ENST00000504465 CEP170Q5SW79 1584 aa12.27□□□□□ -0.45
CAST-213ENST00000504465 ARID4BQ4LE39 1312 aaPredicted RBP12.26□□□□□ -0.45
CAST-213ENST00000504465 ANKRD50Q9ULJ7 1429 aa12.26□□□□□ -0.45
CAST-213ENST00000504465 ADGBQ8N7X0 1667 aa12.26□□□□□ -0.45
CAST-213ENST00000504465 RNF123Q5XPI4 1314 aa12.25□□□□□ -0.45
CAST-213ENST00000504465 KDM5CP41229 1560 aa12.25□□□□□ -0.45
CAST-213ENST00000504465 ITSN2Q9NZM3 1697 aa12.25□□□□□ -0.45
CAST-213ENST00000504465 ZNF326Q5BKZ1 582 aaKnown RBP12.25□□□□□ -0.45
CAST-213ENST00000504465 CHMP7Q8WUX9 453 aaPredicted RBP12.25□□□□□ -0.45
CAST-213ENST00000504465 MAGI1Q96QZ7 1491 aaPredicted RBP12.24□□□□□ -0.45
CAST-213ENST00000504465 CROCC2H7BZ55 1655 aa12.24□□□□□ -0.45
CAST-213ENST00000504465 JPH4Q96JJ6 628 aa12.24□□□□□ -0.45
CAST-213ENST00000504465 ABCC10Q5T3U5 1492 aa12.24□□□□□ -0.45
CAST-213ENST00000504465 SYNJ2O15056 1496 aa12.23□□□□□ -0.45
CAST-213ENST00000504465 PNISRQ8TF01 805 aaKnown RBP12.23□□□□□ -0.45
CAST-213ENST00000504465 RALGAPBQ86X10 1494 aa12.23□□□□□ -0.45
CAST-213ENST00000504465 NUP155O75694 1391 aa12.22□□□□□ -0.45
CAST-213ENST00000504465 NUDCQ9Y266 331 aa12.22□□□□□ -0.45
CAST-213ENST00000504465 NUP160Q12769 1436 aa12.22□□□□□ -0.45
CAST-213ENST00000504465 CNGB1Q14028 1251 aaPredicted RBP12.22□□□□□ -0.45
CAST-213ENST00000504465 POLR3GLQ9BT43 218 aa12.22□□□□□ -0.45
CAST-213ENST00000504465 C9orf84Q5VXU9 1444 aa12.21□□□□□ -0.45
CAST-213ENST00000504465 ATP10BO94823 1461 aa12.21□□□□□ -0.45
CAST-213ENST00000504465 SHANK2Q9UPX8 1470 aa12.21□□□□□ -0.45
CAST-213ENST00000504465 CARMIL2Q6F5E8 1435 aa12.21□□□□□ -0.46
CAST-213ENST00000504465 PLEKHD1A6NEE1 506 aa12.2□□□□□ -0.46
CAST-213ENST00000504465 KDM5DQ9BY66 1539 aa12.2□□□□□ -0.46
CAST-213ENST00000504465 ROCK2O75116 1388 aaKnown RBP12.2□□□□□ -0.46
CAST-213ENST00000504465 PTPRGP23470 1445 aa12.2□□□□□ -0.46
CAST-213ENST00000504465 CARD11Q9BXL7 1154 aa12.2□□□□□ -0.46
CAST-213ENST00000504465 ARHGEF12Q9NZN5 1544 aa12.2□□□□□ -0.46
CAST-213ENST00000504465 ABCA8O94911 1581 aa12.19□□□□□ -0.46
CAST-213ENST00000504465 FBLN2P98095 1184 aa12.19□□□□□ -0.46
CAST-213ENST00000504465 CDC42BPAQ5VT25 1732 aa12.18□□□□□ -0.46
CAST-213ENST00000504465 ST20-MTHFSA0A0A6YYL1 179 aa12.18□□□□□ -0.46
CAST-213ENST00000504465 LRPPRCP42704 1394 aaKnown RBP12.18□□□□□ -0.46
CAST-213ENST00000504465 SENP3-EIF4A1A0A087X0R7 540 aa12.17□□□□□ -0.46
CAST-213ENST00000504465 HNRNPMP52272 730 aaKnown RBP eCLIP12.17□□□□□ -0.46
CAST-213ENST00000504465 KDM2AQ9Y2K7 1162 aa12.17□□□□□ -0.46
CAST-213ENST00000504465 KIF15Q9NS87 1388 aa12.17□□□□□ -0.46
CAST-213ENST00000504465 TSPY4P0CV99 314 aa12.16□□□□□ -0.46
CAST-213ENST00000504465 TSPY10P0CW01 314 aa12.16□□□□□ -0.46
CAST-213ENST00000504465 TMC1Q8TDI8 760 aa12.16□□□□□ -0.46
CAST-213ENST00000504465 DCAF11Q8TEB1 546 aa12.15□□□□□ -0.46
CAST-213ENST00000504465 BCL11AQ9H165 835 aa12.15□□□□□ -0.46
CAST-213ENST00000504465 BRD4O60885 1362 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms