RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 POGZQ7Z3K3 1410 aa22.82■■□□□ 1.24
PDLIM7-211ENST00000504318 BCORL1Q5H9F3 1711 aa22.79■■□□□ 1.24
PDLIM7-211ENST00000504318 SCAPERQ9BY12 1400 aa22.79■■□□□ 1.24
PDLIM7-211ENST00000504318 PREX2Q70Z35 1606 aa22.79■■□□□ 1.24
PDLIM7-211ENST00000504318 YEATS2Q9ULM3 1422 aa22.78■■□□□ 1.24
PDLIM7-211ENST00000504318 MAGI2Q86UL8 1455 aa22.77■■□□□ 1.24
PDLIM7-211ENST00000504318 CDC42BPAQ5VT25 1732 aa22.76■■□□□ 1.23
PDLIM7-211ENST00000504318 CEP162Q5TB80 1403 aa22.75■■□□□ 1.23
PDLIM7-211ENST00000504318 ZFYVE16Q7Z3T8 1539 aa22.75■■□□□ 1.23
PDLIM7-211ENST00000504318 KDM5CP41229 1560 aa22.75■■□□□ 1.23
PDLIM7-211ENST00000504318 ARHGAP5Q13017 1502 aa22.74■■□□□ 1.23
PDLIM7-211ENST00000504318 EFCAB2Q5VUJ9 269 aa22.73■■□□□ 1.23
PDLIM7-211ENST00000504318 ARHGEF12Q9NZN5 1544 aa22.71■■□□□ 1.23
PDLIM7-211ENST00000504318 MADDQ8WXG6 1647 aa22.71■■□□□ 1.23
PDLIM7-211ENST00000504318 ABCC1P33527 1531 aa22.7■■□□□ 1.22
PDLIM7-211ENST00000504318 PTPRMP28827 1452 aa22.68■■□□□ 1.22
PDLIM7-211ENST00000504318 ZNF518AQ6AHZ1 1483 aa22.68■■□□□ 1.22
PDLIM7-211ENST00000504318 ITSN2Q9NZM3 1697 aa22.68■■□□□ 1.22
PDLIM7-211ENST00000504318 HECW2Q9P2P5 1572 aa22.67■■□□□ 1.22
PDLIM7-211ENST00000504318 GPATCH8Q9UKJ3 1502 aaKnown RBP22.66■■□□□ 1.22
PDLIM7-211ENST00000504318 TRAPPC8Q9Y2L5 1435 aa22.64■■□□□ 1.21
PDLIM7-211ENST00000504318 SAMD9LQ8IVG5 1584 aa22.63■■□□□ 1.21
PDLIM7-211ENST00000504318 ATP10AO60312 1499 aa22.62■■□□□ 1.21
PDLIM7-211ENST00000504318 AFAP1Q8N556 730 aa22.62■■□□□ 1.21
PDLIM7-211ENST00000504318 DIP2CQ9Y2E4 1556 aa22.62■■□□□ 1.21
PDLIM7-211ENST00000504318 MLH3Q9UHC1 1453 aa22.6■■□□□ 1.21
PDLIM7-211ENST00000504318 C9orf84Q5VXU9 1444 aa22.6■■□□□ 1.21
PDLIM7-211ENST00000504318 LOC105371045A0A1W2PR82 267 aa22.6■■□□□ 1.21
PDLIM7-211ENST00000504318 RIMS1Q86UR5 1692 aaKnown RBP22.6■■□□□ 1.21
PDLIM7-211ENST00000504318 ABCA6Q8N139 1617 aa22.6■■□□□ 1.21
PDLIM7-211ENST00000504318 REREQ9P2R6 1566 aa22.59■■□□□ 1.21
PDLIM7-211ENST00000504318 EHBP1L1Q8N3D4 1523 aa22.58■■□□□ 1.21
PDLIM7-211ENST00000504318 KIDINS220Q9ULH0 1771 aa22.58■■□□□ 1.2
PDLIM7-211ENST00000504318 TIAM1Q13009 1591 aa22.57■■□□□ 1.2
PDLIM7-211ENST00000504318 ARID4BQ4LE39 1312 aaPredicted RBP22.57■■□□□ 1.2
PDLIM7-211ENST00000504318 SYCP2Q9BX26 1530 aa22.55■■□□□ 1.2
PDLIM7-211ENST00000504318 FER1L4A9Z1Z3 1794 aa22.53■■□□□ 1.2
PDLIM7-211ENST00000504318 MTUS2Q5JR59 1369 aa22.53■■□□□ 1.2
PDLIM7-211ENST00000504318 VPS8Q8N3P4 1428 aa22.51■■□□□ 1.19
PDLIM7-211ENST00000504318 KIAA1107Q9UPP5 1409 aa22.51■■□□□ 1.19
PDLIM7-211ENST00000504318 AGLP35573 1532 aa22.49■■□□□ 1.19
PDLIM7-211ENST00000504318 CCNB3Q8WWL7 1395 aa22.49■■□□□ 1.19
PDLIM7-211ENST00000504318 LMTK3Q96Q04 1460 aa22.47■■□□□ 1.19
PDLIM7-211ENST00000504318 INO80Q9ULG1 1556 aaPredicted RBP22.47■■□□□ 1.19
PDLIM7-211ENST00000504318 MBD5Q9P267 1494 aa22.46■■□□□ 1.19
PDLIM7-211ENST00000504318 PLEKHH2Q8IVE3 1493 aa22.45■■□□□ 1.18
PDLIM7-211ENST00000504318 NCOA2Q15596 1464 aa22.44■■□□□ 1.18
PDLIM7-211ENST00000504318 SUPT6HQ7KZ85 1726 aaKnown RBP22.43■■□□□ 1.18
PDLIM7-211ENST00000504318 CFDP1Q9UEE9 299 aaPredicted RBP22.43■■□□□ 1.18
PDLIM7-211ENST00000504318 HNRNPMP52272 730 aaKnown RBP eCLIP22.42■■□□□ 1.184e-8■■■■■ 27.6
PDLIM7-211ENST00000504318 MLECQ14165 292 aa22.42■■□□□ 1.18
PDLIM7-211ENST00000504318 ZNF777Q9ULD5 760 aaPredicted RBP22.42■■□□□ 1.18
PDLIM7-211ENST00000504318 PLXNC1O60486 1568 aa22.42■■□□□ 1.18
PDLIM7-211ENST00000504318 ATP7AQ04656 1500 aa22.41■■□□□ 1.18
PDLIM7-211ENST00000504318 MAP3K1Q13233 1512 aa22.41■■□□□ 1.18
PDLIM7-211ENST00000504318 ZNF644Q9H582 1327 aaPredicted RBP22.41■■□□□ 1.18
PDLIM7-211ENST00000504318 LRRC9Q6ZRR7 1453 aa22.41■■□□□ 1.18
PDLIM7-211ENST00000504318 SPAG9O60271 1321 aaKnown RBP22.35■■□□□ 1.17
PDLIM7-211ENST00000504318 CAMSAP2Q08AD1 1489 aa22.34■■□□□ 1.17
PDLIM7-211ENST00000504318 C3P01024 1663 aa22.33■■□□□ 1.17
PDLIM7-211ENST00000504318 KANK4Q5T7N3 995 aaPredicted RBP22.32■■□□□ 1.16
PDLIM7-211ENST00000504318 ADGBQ8N7X0 1667 aa22.31■■□□□ 1.16
PDLIM7-211ENST00000504318 MYT1LQ9UL68 1186 aa22.31■■□□□ 1.16
PDLIM7-211ENST00000504318 RTEL1-TNFRSF6BF6WH68 1400 aa22.31■■□□□ 1.16
PDLIM7-211ENST00000504318 PREX1Q8TCU6 1659 aa22.3■■□□□ 1.16
PDLIM7-211ENST00000504318 A2MP01023 1474 aa22.3■■□□□ 1.16
PDLIM7-211ENST00000504318 CEBPAP49715 358 aaPredicted RBP22.29■■□□□ 1.16
PDLIM7-211ENST00000504318 ARHGEF5Q12774 1597 aa22.29■■□□□ 1.16
PDLIM7-211ENST00000504318 CCDC141Q6ZP82 1450 aa22.28■■□□□ 1.16
PDLIM7-211ENST00000504318 MROH2AA6NES4 1674 aa22.27■■□□□ 1.16
PDLIM7-211ENST00000504318 SETD1BQ9UPS6 1966 aaKnown RBP22.27■■□□□ 1.16
PDLIM7-211ENST00000504318 PLPPR3Q6T4P5 718 aa22.24■■□□□ 1.15
PDLIM7-211ENST00000504318 CNTLNQ9NXG0 1405 aa22.23■■□□□ 1.15
PDLIM7-211ENST00000504318 HSPA2P54652 639 aa22.23■■□□□ 1.15
PDLIM7-211ENST00000504318 MYOM3Q5VTT5 1437 aa22.21■■□□□ 1.15
PDLIM7-211ENST00000504318 MIA2Q96PC5 1412 aa22.2■■□□□ 1.14
PDLIM7-211ENST00000504318 CLTCQ00610 1675 aaKnown RBP22.2■■□□□ 1.14
PDLIM7-211ENST00000504318 DHX29Q7Z478 1369 aaKnown RBP22.19■■□□□ 1.14
PDLIM7-211ENST00000504318 MAST1Q9Y2H9 1570 aa22.19■■□□□ 1.14
PDLIM7-211ENST00000504318 STRCQ7RTU9 1775 aa22.17■■□□□ 1.14
PDLIM7-211ENST00000504318 RSPH4AQ5TD94 716 aa22.17■■□□□ 1.14
PDLIM7-211ENST00000504318 ZMYM3Q14202 1370 aa22.15■■□□□ 1.14
PDLIM7-211ENST00000504318 UHRF1BP1Q6BDS2 1440 aa22.14■■□□□ 1.14
PDLIM7-211ENST00000504318 NPATQ14207 1427 aa22.14■■□□□ 1.13
PDLIM7-211ENST00000504318 ILDR1Q86SU0 546 aaPredicted RBP22.12■■□□□ 1.13
PDLIM7-211ENST00000504318 PTPRKQ15262 1439 aa22.11■■□□□ 1.13
PDLIM7-211ENST00000504318 PPP6R1Q9UPN7 881 aa22.09■■□□□ 1.13
PDLIM7-211ENST00000504318 CROCC2H7BZ55 1655 aa22.09■■□□□ 1.13
PDLIM7-211ENST00000504318 FAM135AQ9P2D6 1515 aa22.09■■□□□ 1.13
PDLIM7-211ENST00000504318 PTPN23Q9H3S7 1636 aa22.09■■□□□ 1.13
PDLIM7-211ENST00000504318 ZNF142P52746 1687 aaPredicted RBP22.08■■□□□ 1.13
PDLIM7-211ENST00000504318 GGT6Q6P531 493 aa22.08■■□□□ 1.13
PDLIM7-211ENST00000504318 RNF17Q9BXT8 1623 aaKnown RBP22.08■■□□□ 1.13
PDLIM7-211ENST00000504318 TCOF1Q13428 1488 aaKnown RBP22.08■■□□□ 1.12
PDLIM7-211ENST00000504318 ESF1Q9H501 851 aaKnown RBP22.07■■□□□ 1.12
PDLIM7-211ENST00000504318 MYO3AQ8NEV4 1616 aa22.06■■□□□ 1.12
PDLIM7-211ENST00000504318 MROH1Q8NDA8 1641 aa22.06■■□□□ 1.12
PDLIM7-211ENST00000504318 KDM5DQ9BY66 1539 aa22.05■■□□□ 1.12
PDLIM7-211ENST00000504318 ABCC5O15440 1437 aa22.05■■□□□ 1.12
PDLIM7-211ENST00000504318 FGD6Q6ZV73 1430 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms