RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 LCE3BQ5TA77 95 aa5.34□□□□□ -1.55
PDLIM7-211ENST00000504318 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
PDLIM7-211ENST00000504318 LCE5AQ5TCM9 118 aa5.26□□□□□ -1.57
PDLIM7-211ENST00000504318 PRAC1Q96KF2 57 aa5.26□□□□□ -1.57
PDLIM7-211ENST00000504318 C10orf95Q9H7T3 257 aa5.26□□□□□ -1.57
PDLIM7-211ENST00000504318 MT1EP04732 61 aa5.25□□□□□ -1.57
PDLIM7-211ENST00000504318 KRTAP25-1Q3LHN0 102 aa5.23□□□□□ -1.57
PDLIM7-211ENST00000504318 KRTAP19-3Q7Z4W3 81 aa5.19□□□□□ -1.58
PDLIM7-211ENST00000504318 TNP1P09430 55 aa5.17□□□□□ -1.58
PDLIM7-211ENST00000504318 DSTQ03001 7570 aaKnown RBP5.16□□□□□ -1.58
PDLIM7-211ENST00000504318 KRTAP19-5Q3LI72 72 aa5.11□□□□□ -1.59
PDLIM7-211ENST00000504318 PP632Q6XCG6 107 aa5.1□□□□□ -1.59
PDLIM7-211ENST00000504318 KRTAP23-1A1A580 65 aa5.07□□□□□ -1.6
PDLIM7-211ENST00000504318 MT1GP13640 62 aa5.04□□□□□ -1.6
PDLIM7-211ENST00000504318 MT1LQ93083 61 aa5□□□□□ -1.61
PDLIM7-211ENST00000504318 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
PDLIM7-211ENST00000504318 MT1MQ8N339 61 aa4.99□□□□□ -1.61
PDLIM7-211ENST00000504318 LCE3AQ5TA76 89 aa4.95□□□□□ -1.62
PDLIM7-211ENST00000504318 LCE1DQ5T752 114 aa4.91□□□□□ -1.62
PDLIM7-211ENST00000504318 KRTAP4-3Q9BYR4 195 aa4.89□□□□□ -1.63
PDLIM7-211ENST00000504318 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
PDLIM7-211ENST00000504318 KRTAP5-4Q6L8H1 288 aa4.85□□□□□ -1.63
PDLIM7-211ENST00000504318 GPR98Q8WXG9 6306 aa4.82□□□□□ -1.64
PDLIM7-211ENST00000504318 HMCN1Q96RW7 5635 aa4.8□□□□□ -1.64
PDLIM7-211ENST00000504318 MT4P47944 62 aa4.79□□□□□ -1.64
PDLIM7-211ENST00000504318 KRTAP4-7Q9BYR0 210 aa4.76□□□□□ -1.65
PDLIM7-211ENST00000504318 KRTAP12-3P60328 96 aa4.73□□□□□ -1.65
PDLIM7-211ENST00000504318 KRTAP4-6Q9BYQ5 205 aa4.72□□□□□ -1.65
PDLIM7-211ENST00000504318 KRTAP5-5Q701N2 237 aaPredicted RBP4.65□□□□□ -1.67
PDLIM7-211ENST00000504318 KRTAP15-1Q3LI76 137 aa4.64□□□□□ -1.67
PDLIM7-211ENST00000504318 KRTAP5-10Q6L8G5 202 aa4.63□□□□□ -1.67
PDLIM7-211ENST00000504318 AHNAK2Q8IVF2 5795 aa4.63□□□□□ -1.67
PDLIM7-211ENST00000504318 KRTAP20-2Q3LI61 65 aa4.54□□□□□ -1.68
PDLIM7-211ENST00000504318 KRTAP19-4Q3LI73 84 aa4.53□□□□□ -1.68
PDLIM7-211ENST00000504318 LOC100996750A0A140TA64 210 aa4.51□□□□□ -1.69
PDLIM7-211ENST00000504318 SPRR5A0A1B0GTR4 108 aa4.49□□□□□ -1.69
PDLIM7-211ENST00000504318 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
PDLIM7-211ENST00000504318 SYNE1Q8NF91 8797 aaKnown RBP4.46□□□□□ -1.69
PDLIM7-211ENST00000504318 KRTAP5-7Q6L8G8 165 aa4.45□□□□□ -1.7
PDLIM7-211ENST00000504318 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
PDLIM7-211ENST00000504318 LCE3CQ5T5A8 94 aa4.4□□□□□ -1.71
PDLIM7-211ENST00000504318 KRTAP12-4P60329 112 aa4.38□□□□□ -1.71
PDLIM7-211ENST00000504318 KRTAP5-2Q701N4 177 aa4.25□□□□□ -1.73
PDLIM7-211ENST00000504318 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
PDLIM7-211ENST00000504318 MT1AP04731 61 aa4.24□□□□□ -1.73
PDLIM7-211ENST00000504318 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
PDLIM7-211ENST00000504318 KRTAP9-6A8MVA2 160 aa4.23□□□□□ -1.73
PDLIM7-211ENST00000504318 KRTAP4-11Q9BYQ6 195 aa4.14□□□□□ -1.75
PDLIM7-211ENST00000504318 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
PDLIM7-211ENST00000504318 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
PDLIM7-211ENST00000504318 H3BS24 57 aa4.03□□□□□ -1.76
PDLIM7-211ENST00000504318 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
PDLIM7-211ENST00000504318 A0A0A0MQY5 61 aa4□□□□□ -1.77
PDLIM7-211ENST00000504318 OBSCNQ5VST9 7968 aa3.91□□□□□ -1.78
PDLIM7-211ENST00000504318 MUC5BQ9HC84 5762 aaPredicted RBP3.84□□□□□ -1.79
PDLIM7-211ENST00000504318 MT3P25713 68 aa3.83□□□□□ -1.8
PDLIM7-211ENST00000504318 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
PDLIM7-211ENST00000504318 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
PDLIM7-211ENST00000504318 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
PDLIM7-211ENST00000504318 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
PDLIM7-211ENST00000504318 INE1O15225 51 aa3.59□□□□□ -1.83
PDLIM7-211ENST00000504318 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
PDLIM7-211ENST00000504318 KRTAP4-2Q9BYR5 136 aa3.44□□□□□ -1.86
PDLIM7-211ENST00000504318 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
PDLIM7-211ENST00000504318 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
PDLIM7-211ENST00000504318 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
PDLIM7-211ENST00000504318 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
PDLIM7-211ENST00000504318 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
PDLIM7-211ENST00000504318 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
PDLIM7-211ENST00000504318 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
PDLIM7-211ENST00000504318 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
PDLIM7-211ENST00000504318 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
PDLIM7-211ENST00000504318 PRM1P04553 51 aa2.82□□□□□ -1.96
PDLIM7-211ENST00000504318 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
PDLIM7-211ENST00000504318 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
PDLIM7-211ENST00000504318 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
PDLIM7-211ENST00000504318 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
PDLIM7-211ENST00000504318 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 17 ms