RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 ARAP3Q8WWN8 1544 aa25.83■■□□□ 1.72
SCLT1-205ENST00000503401 CFAP74Q9C0B2 1584 aa25.83■■□□□ 1.72
SCLT1-205ENST00000503401 GPATCH8Q9UKJ3 1502 aaKnown RBP25.82■■□□□ 1.72
SCLT1-205ENST00000503401 CCNB3Q8WWL7 1395 aa25.81■■□□□ 1.72
SCLT1-205ENST00000503401 AKNAQ7Z591 1439 aa25.81■■□□□ 1.72
SCLT1-205ENST00000503401 EFCAB2Q5VUJ9 269 aa25.8■■□□□ 1.72
SCLT1-205ENST00000503401 PHLDB1Q86UU1 1377 aa25.78■■□□□ 1.72
SCLT1-205ENST00000503401 ADGRL1O94910 1474 aa25.75■■□□□ 1.71
SCLT1-205ENST00000503401 ITSN2Q9NZM3 1697 aa25.75■■□□□ 1.71
SCLT1-205ENST00000503401 RAPGEF3O95398 923 aa25.74■■□□□ 1.71
SCLT1-205ENST00000503401 ZNF777Q9ULD5 760 aaPredicted RBP25.74■■□□□ 1.71
SCLT1-205ENST00000503401 CFDP1Q9UEE9 299 aaPredicted RBP25.74■■□□□ 1.71
SCLT1-205ENST00000503401 PPARGC1BQ86YN6 1023 aaKnown RBP25.73■■□□□ 1.71
SCLT1-205ENST00000503401 SCAPERQ9BY12 1400 aa25.71■■□□□ 1.71
SCLT1-205ENST00000503401 SAMD9LQ8IVG5 1584 aa25.71■■□□□ 1.71
SCLT1-205ENST00000503401 FRMPD1Q5SYB0 1578 aa25.7■■□□□ 1.7
SCLT1-205ENST00000503401 DENND4BO75064 1496 aaPredicted RBP25.7■■□□□ 1.7
SCLT1-205ENST00000503401 RICTORQ6R327 1708 aa25.69■■□□□ 1.7
SCLT1-205ENST00000503401 ABCC1P33527 1531 aa25.68■■□□□ 1.7
SCLT1-205ENST00000503401 ZNF644Q9H582 1327 aaPredicted RBP25.66■■□□□ 1.7
SCLT1-205ENST00000503401 ARHGEF12Q9NZN5 1544 aa25.66■■□□□ 1.7
SCLT1-205ENST00000503401 POGZQ7Z3K3 1410 aa25.64■■□□□ 1.69
SCLT1-205ENST00000503401 MYOM3Q5VTT5 1437 aa25.63■■□□□ 1.69
SCLT1-205ENST00000503401 SYCP2Q9BX26 1530 aa25.63■■□□□ 1.69
SCLT1-205ENST00000503401 HNRNPMP52272 730 aaKnown RBP eCLIP25.6■■□□□ 1.695e-10■■■■■ 36.7
SCLT1-205ENST00000503401 AFAP1Q8N556 730 aa25.6■■□□□ 1.69
SCLT1-205ENST00000503401 TRAPPC8Q9Y2L5 1435 aa25.6■■□□□ 1.69
SCLT1-205ENST00000503401 CAMSAP2Q08AD1 1489 aa25.58■■□□□ 1.69
SCLT1-205ENST00000503401 ZNF518AQ6AHZ1 1483 aa25.57■■□□□ 1.68
SCLT1-205ENST00000503401 PLEKHH2Q8IVE3 1493 aa25.56■■□□□ 1.68
SCLT1-205ENST00000503401 KIAA1107Q9UPP5 1409 aa25.55■■□□□ 1.68
SCLT1-205ENST00000503401 ZMYM4Q5VZL5 1548 aa25.55■■□□□ 1.68
SCLT1-205ENST00000503401 MIA2Q96PC5 1412 aa25.54■■□□□ 1.68
SCLT1-205ENST00000503401 KDM5CP41229 1560 aa25.53■■□□□ 1.68
SCLT1-205ENST00000503401 FGD6Q6ZV73 1430 aa25.51■■□□□ 1.67
SCLT1-205ENST00000503401 PTPN23Q9H3S7 1636 aa25.51■■□□□ 1.67
SCLT1-205ENST00000503401 MBD5Q9P267 1494 aa25.51■■□□□ 1.67
SCLT1-205ENST00000503401 YEATS2Q9ULM3 1422 aa25.5■■□□□ 1.67
SCLT1-205ENST00000503401 MYT1LQ9UL68 1186 aa25.49■■□□□ 1.67
SCLT1-205ENST00000503401 ZFYVE16Q7Z3T8 1539 aa25.49■■□□□ 1.67
SCLT1-205ENST00000503401 HECW2Q9P2P5 1572 aa25.48■■□□□ 1.67
SCLT1-205ENST00000503401 ARHGEF40Q8TER5 1519 aa25.48■■□□□ 1.67
SCLT1-205ENST00000503401 MAGI2Q86UL8 1455 aa25.45■■□□□ 1.67
SCLT1-205ENST00000503401 KIDINS220Q9ULH0 1771 aa25.44■■□□□ 1.66
SCLT1-205ENST00000503401 CCDC141Q6ZP82 1450 aa25.43■■□□□ 1.66
SCLT1-205ENST00000503401 MLH3Q9UHC1 1453 aa25.43■■□□□ 1.66
SCLT1-205ENST00000503401 SPAG9O60271 1321 aaKnown RBP25.43■■□□□ 1.66
SCLT1-205ENST00000503401 ARHGEF5Q12774 1597 aa25.43■■□□□ 1.66
SCLT1-205ENST00000503401 TCOF1Q13428 1488 aaKnown RBP25.42■■□□□ 1.66
SCLT1-205ENST00000503401 ABCA6Q8N139 1617 aa25.41■■□□□ 1.66
SCLT1-205ENST00000503401 FAM50AQ14320 339 aaKnown RBP25.4■■□□□ 1.66
SCLT1-205ENST00000503401 INO80Q9ULG1 1556 aaPredicted RBP25.39■■□□□ 1.66
SCLT1-205ENST00000503401 DIP2CQ9Y2E4 1556 aa25.39■■□□□ 1.65
SCLT1-205ENST00000503401 ATP7AQ04656 1500 aa25.39■■□□□ 1.65
SCLT1-205ENST00000503401 SIGLEC1Q9BZZ2 1709 aa25.38■■□□□ 1.65
SCLT1-205ENST00000503401 RSPH4AQ5TD94 716 aa25.37■■□□□ 1.65
SCLT1-205ENST00000503401 ATP10AO60312 1499 aa25.35■■□□□ 1.65
SCLT1-205ENST00000503401 DNMT1P26358 1616 aaKnown RBP25.33■■□□□ 1.65
SCLT1-205ENST00000503401 ABCC5O15440 1437 aa25.33■■□□□ 1.65
SCLT1-205ENST00000503401 C9orf84Q5VXU9 1444 aa25.33■■□□□ 1.65
SCLT1-205ENST00000503401 TSPY4P0CV99 314 aa25.33■■□□□ 1.65
SCLT1-205ENST00000503401 TSPY10P0CW01 314 aa25.33■■□□□ 1.65
SCLT1-205ENST00000503401 CROCC2H7BZ55 1655 aa25.32■■□□□ 1.64
SCLT1-205ENST00000503401 ARID4BQ4LE39 1312 aaPredicted RBP25.32■■□□□ 1.64
SCLT1-205ENST00000503401 DAPK1P53355 1430 aa25.32■■□□□ 1.64
SCLT1-205ENST00000503401 RTEL1-TNFRSF6BF6WH68 1400 aa25.3■■□□□ 1.64
SCLT1-205ENST00000503401 MAST1Q9Y2H9 1570 aa25.27■■□□□ 1.64
SCLT1-205ENST00000503401 ADGBQ8N7X0 1667 aa25.27■■□□□ 1.64
SCLT1-205ENST00000503401 RRBP1Q9P2E9 1410 aaKnown RBP25.26■■□□□ 1.63
SCLT1-205ENST00000503401 CHIC2Q9UKJ5 165 aa25.25■■□□□ 1.63
SCLT1-205ENST00000503401 REREQ9P2R6 1566 aa25.25■■□□□ 1.63
SCLT1-205ENST00000503401 SHANK2Q9UPX8 1470 aa25.24■■□□□ 1.63
SCLT1-205ENST00000503401 KDM4FA0A1W2PPD8 638 aa25.24■■□□□ 1.63
SCLT1-205ENST00000503401 A2MP01023 1474 aa25.23■■□□□ 1.63
SCLT1-205ENST00000503401 BCORL1Q5H9F3 1711 aa25.23■■□□□ 1.63
SCLT1-205ENST00000503401 ITGAEP38570 1179 aa25.23■■□□□ 1.63
SCLT1-205ENST00000503401 MLECQ14165 292 aa25.23■■□□□ 1.63
SCLT1-205ENST00000503401 PLXNC1O60486 1568 aa25.2■■□□□ 1.63
SCLT1-205ENST00000503401 PTPRKQ15262 1439 aa25.2■■□□□ 1.63
SCLT1-205ENST00000503401 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.2■■□□□ 1.62
SCLT1-205ENST00000503401 RRP7BPQ9NSQ0 103 aa25.17■■□□□ 1.62
SCLT1-205ENST00000503401 AGLP35573 1532 aa25.17■■□□□ 1.62
SCLT1-205ENST00000503401 DHX29Q7Z478 1369 aaKnown RBP25.16■■□□□ 1.62
SCLT1-205ENST00000503401 ADAMTSL3P82987 1691 aa25.16■■□□□ 1.62
SCLT1-205ENST00000503401 KIF15Q9NS87 1388 aa25.14■■□□□ 1.62
SCLT1-205ENST00000503401 MADDQ8WXG6 1647 aa25.14■■□□□ 1.61
SCLT1-205ENST00000503401 ANKRD30AQ9BXX3 1397 aa25.13■■□□□ 1.61
SCLT1-205ENST00000503401 NCOA1Q15788 1441 aa25.12■■□□□ 1.61
SCLT1-205ENST00000503401 ADGRL2O95490 1459 aa25.11■■□□□ 1.61
SCLT1-205ENST00000503401 DUOX2Q9NRD8 1548 aa25.1■■□□□ 1.61
SCLT1-205ENST00000503401 FER1L4A9Z1Z3 1794 aa25.1■■□□□ 1.61
SCLT1-205ENST00000503401 KIF3BO15066 747 aa25.09■■□□□ 1.61
SCLT1-205ENST00000503401 GGT6Q6P531 493 aa25.08■■□□□ 1.6
SCLT1-205ENST00000503401 RIMS1Q86UR5 1692 aaKnown RBP25.07■■□□□ 1.6
SCLT1-205ENST00000503401 ROCK1Q13464 1354 aa25.03■■□□□ 1.6
SCLT1-205ENST00000503401 EIF2AK4Q9P2K8 1649 aaKnown RBP25.03■■□□□ 1.6
SCLT1-205ENST00000503401 ERBINQ96RT1 1412 aa25.01■■□□□ 1.59
SCLT1-205ENST00000503401 PLPPR3Q6T4P5 718 aa25.01■■□□□ 1.59
SCLT1-205ENST00000503401 PTPRMP28827 1452 aa25■■□□□ 1.59
SCLT1-205ENST00000503401 AEBP2Q6ZN18 517 aaPredicted RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms