RNA–Protein interactions for RNA: ENST00000502929.5

MATR3-232, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 4,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-232ENST00000502929 MAGI3Q5TCQ9 1506 aa11.41□□□□□ -0.58
MATR3-232ENST00000502929 ANP32CO43423 234 aa11.4□□□□□ -0.58
MATR3-232ENST00000502929 CNGB1Q14028 1251 aaPredicted RBP11.4□□□□□ -0.58
MATR3-232ENST00000502929 MAPKBP1O60336 1514 aa11.4□□□□□ -0.59
MATR3-232ENST00000502929 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.39□□□□□ -0.592e-7■■■□□ 18.1
MATR3-232ENST00000502929 RAPGEF6Q8TEU7 1601 aa11.39□□□□□ -0.59
MATR3-232ENST00000502929 HNRNPMP52272 730 aaKnown RBP eCLIP11.38□□□□□ -0.594e-9■■■■■ 28.9
MATR3-232ENST00000502929 CEP170Q5SW79 1584 aa11.38□□□□□ -0.59
MATR3-232ENST00000502929 NUP160Q12769 1436 aa11.36□□□□□ -0.59
MATR3-232ENST00000502929 ANKRD30AQ9BXX3 1397 aa11.36□□□□□ -0.59
MATR3-232ENST00000502929 DAPK1P53355 1430 aa11.35□□□□□ -0.59
MATR3-232ENST00000502929 EIF4G2P78344 907 aaKnown RBP eCLIP11.34□□□□□ -0.59
MATR3-232ENST00000502929 PKD2Q13563 968 aa11.34□□□□□ -0.59
MATR3-232ENST00000502929 L3MBTL2Q969R5 705 aa11.34□□□□□ -0.59
MATR3-232ENST00000502929 LRRIQ1Q96JM4 1722 aa11.33□□□□□ -0.59
MATR3-232ENST00000502929 KDM2AQ9Y2K7 1162 aa11.32□□□□□ -0.6
MATR3-232ENST00000502929 ABCC5O15440 1437 aa11.32□□□□□ -0.6
MATR3-232ENST00000502929 NUP155O75694 1391 aa11.31□□□□□ -0.6
MATR3-232ENST00000502929 NPM1P06748 294 aaKnown RBP eCLIP11.31□□□□□ -0.6
MATR3-232ENST00000502929 TCOF1Q13428 1488 aaKnown RBP11.31□□□□□ -0.6
MATR3-232ENST00000502929 ARHGEF11O15085 1522 aa11.3□□□□□ -0.6
MATR3-232ENST00000502929 CAMSAP2Q08AD1 1489 aa11.3□□□□□ -0.6
MATR3-232ENST00000502929 HSPA5P11021 654 aaKnown RBP11.29□□□□□ -0.6
MATR3-232ENST00000502929 ATP10BO94823 1461 aa11.29□□□□□ -0.6
MATR3-232ENST00000502929 GPATCH8Q9UKJ3 1502 aaKnown RBP11.29□□□□□ -0.6
MATR3-232ENST00000502929 ROCK1Q13464 1354 aa11.27□□□□□ -0.61
MATR3-232ENST00000502929 RGL3Q3MIN7 710 aa11.27□□□□□ -0.61
MATR3-232ENST00000502929 ANKRD50Q9ULJ7 1429 aa11.26□□□□□ -0.61
MATR3-232ENST00000502929 EFCAB2Q5VUJ9 269 aa11.26□□□□□ -0.61
MATR3-232ENST00000502929 KIF14Q15058 1648 aa11.26□□□□□ -0.61
MATR3-232ENST00000502929 AKNAQ7Z591 1439 aa11.25□□□□□ -0.61
MATR3-232ENST00000502929 KIF15Q9NS87 1388 aa11.25□□□□□ -0.61
MATR3-232ENST00000502929 C9orf84Q5VXU9 1444 aa11.24□□□□□ -0.61
MATR3-232ENST00000502929 RSPH4AQ5TD94 716 aa11.24□□□□□ -0.61
MATR3-232ENST00000502929 NEFLP07196 543 aa11.23□□□□□ -0.61
MATR3-232ENST00000502929 NCOA1Q15788 1441 aa11.23□□□□□ -0.61
MATR3-232ENST00000502929 ARHGAP5Q13017 1502 aa11.23□□□□□ -0.61
MATR3-232ENST00000502929 PELP1Q8IZL8 1130 aaKnown RBP11.23□□□□□ -0.61
MATR3-232ENST00000502929 ITSN2Q9NZM3 1697 aa11.22□□□□□ -0.61
MATR3-232ENST00000502929 DCAF11Q8TEB1 546 aa11.21□□□□□ -0.61
MATR3-232ENST00000502929 DNMT1P26358 1616 aaKnown RBP11.2□□□□□ -0.62
MATR3-232ENST00000502929 CHD1O14646 1710 aa11.2□□□□□ -0.62
MATR3-232ENST00000502929 CARD11Q9BXL7 1154 aa11.2□□□□□ -0.62
MATR3-232ENST00000502929 KDM6BO15054 1643 aa11.2□□□□□ -0.62
MATR3-232ENST00000502929 ABCA8O94911 1581 aa11.19□□□□□ -0.62
MATR3-232ENST00000502929 ANKRD30BQ9BXX2 1392 aa11.19□□□□□ -0.62
MATR3-232ENST00000502929 OSCARQ8IYS5 282 aa11.19□□□□□ -0.62
MATR3-232ENST00000502929 NBPF8Q3BBV2 869 aa11.19□□□□□ -0.62
MATR3-232ENST00000502929 HNRNPUQ00839 825 aaKnown RBP eCLIP11.18□□□□□ -0.62
MATR3-232ENST00000502929 SPAG9O60271 1321 aaKnown RBP11.18□□□□□ -0.62
MATR3-232ENST00000502929 GCC2Q8IWJ2 1684 aa11.17□□□□□ -0.62
MATR3-232ENST00000502929 KIAA1107Q9UPP5 1409 aa11.17□□□□□ -0.62
MATR3-232ENST00000502929 BCANQ96GW7 911 aa11.16□□□□□ -0.62
MATR3-232ENST00000502929 FAM9BQ8IZU0 186 aa11.16□□□□□ -0.62
MATR3-232ENST00000502929 CCDC141Q6ZP82 1450 aa11.16□□□□□ -0.62
MATR3-232ENST00000502929 AFAP1Q8N556 730 aa11.15□□□□□ -0.62
MATR3-232ENST00000502929 MRS2Q9HD23 443 aa11.15□□□□□ -0.62
MATR3-232ENST00000502929 CCER2I3L3R5 266 aa11.14□□□□□ -0.63
MATR3-232ENST00000502929 WASHC2AQ641Q2 1341 aa11.14□□□□□ -0.63
MATR3-232ENST00000502929 CHGAP10645 457 aaKnown RBP11.14□□□□□ -0.63
MATR3-232ENST00000502929 ERCC6L2Q5T890 1561 aa11.14□□□□□ -0.63
MATR3-232ENST00000502929 ABCC10Q5T3U5 1492 aa11.13□□□□□ -0.63
MATR3-232ENST00000502929 RPRD2Q5VT52 1461 aaKnown RBP11.13□□□□□ -0.63
MATR3-232ENST00000502929 CCDC144AA2RUR9 1427 aa11.12□□□□□ -0.63
MATR3-232ENST00000502929 KIF3BO15066 747 aa11.12□□□□□ -0.63
MATR3-232ENST00000502929 ABCC2Q92887 1545 aa11.12□□□□□ -0.63
MATR3-232ENST00000502929 SYCP2Q9BX26 1530 aa11.11□□□□□ -0.63
MATR3-232ENST00000502929 PZPP20742 1482 aa11.1□□□□□ -0.63
MATR3-232ENST00000502929 PLEKHH2Q8IVE3 1493 aa11.1□□□□□ -0.63
MATR3-232ENST00000502929 USP47Q96K76 1375 aa11.1□□□□□ -0.63
MATR3-232ENST00000502929 ROCK2O75116 1388 aaKnown RBP11.09□□□□□ -0.63
MATR3-232ENST00000502929 FKBP8Q14318 412 aa11.09□□□□□ -0.63
MATR3-232ENST00000502929 ADGRL2O95490 1459 aa11.09□□□□□ -0.63
MATR3-232ENST00000502929 CCDC7Q96M83 1385 aa11.09□□□□□ -0.63
MATR3-232ENST00000502929 CDC42BPAQ5VT25 1732 aa11.08□□□□□ -0.64
MATR3-232ENST00000502929 ADCY10Q96PN6 1610 aa11.08□□□□□ -0.64
MATR3-232ENST00000502929 KANK1Q14678 1352 aa11.08□□□□□ -0.64
MATR3-232ENST00000502929 KIF7Q2M1P5 1343 aa11.07□□□□□ -0.64
MATR3-232ENST00000502929 DENND4BO75064 1496 aaPredicted RBP11.07□□□□□ -0.64
MATR3-232ENST00000502929 SHANK2Q9UPX8 1470 aa11.07□□□□□ -0.64
MATR3-232ENST00000502929 ST20-MTHFSA0A0A6YYL1 179 aa11.07□□□□□ -0.64
MATR3-232ENST00000502929 C11orf95C9JLR9 678 aaPredicted RBP11.07□□□□□ -0.64
MATR3-232ENST00000502929 ADGBQ8N7X0 1667 aa11.07□□□□□ -0.64
MATR3-232ENST00000502929 GGT6Q6P531 493 aa11.06□□□□□ -0.64
MATR3-232ENST00000502929 PLCH2O75038 1416 aa11.06□□□□□ -0.64
MATR3-232ENST00000502929 SENP3-EIF4A1A0A087X0R7 540 aa11.05□□□□□ -0.64
MATR3-232ENST00000502929 CYB5RLQ6IPT4 315 aa11.05□□□□□ -0.64
MATR3-232ENST00000502929 TMC1Q8TDI8 760 aa11.05□□□□□ -0.64
MATR3-232ENST00000502929 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.05□□□□□ -0.642e-7■□□□□ 10.6
MATR3-232ENST00000502929 MBD5Q9P267 1494 aa11.05□□□□□ -0.64
MATR3-232ENST00000502929 TTC37Q6PGP7 1564 aa11.04□□□□□ -0.64
MATR3-232ENST00000502929 SCAPERQ9BY12 1400 aa11.04□□□□□ -0.64
MATR3-232ENST00000502929 CNTLNQ9NXG0 1405 aa11.04□□□□□ -0.64
MATR3-232ENST00000502929 PRKRIP1Q9H875 184 aaPredicted RBP11.04□□□□□ -0.64
MATR3-232ENST00000502929 SAMD9LQ8IVG5 1584 aa11.04□□□□□ -0.64
MATR3-232ENST00000502929 SENP3Q9H4L4 574 aaPredicted RBP11.03□□□□□ -0.64
MATR3-232ENST00000502929 SUPT16HQ9Y5B9 1047 aaKnown RBP11.02□□□□□ -0.64
MATR3-232ENST00000502929 TRAPPC8Q9Y2L5 1435 aa11.02□□□□□ -0.64
MATR3-232ENST00000502929 TEX14Q8IWB6 1497 aa11.02□□□□□ -0.65
MATR3-232ENST00000502929 PREX2Q70Z35 1606 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms