RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PREX2Q70Z35 1606 aa39.44■■■■□ 3.9
LSM6-202ENST00000502781 NCOA2Q15596 1464 aa39.42■■■■□ 3.9
LSM6-202ENST00000502781 ARHGAP5Q13017 1502 aa39.41■■■■□ 3.9
LSM6-202ENST00000502781 CDC42BPAQ5VT25 1732 aa39.41■■■■□ 3.9
LSM6-202ENST00000502781 CDC42BPBQ9Y5S2 1711 aa39.41■■■■□ 3.9
LSM6-202ENST00000502781 CCNB3Q8WWL7 1395 aa39.41■■■■□ 3.9
LSM6-202ENST00000502781 SUPT6HQ7KZ85 1726 aaKnown RBP39.4■■■■□ 3.9
LSM6-202ENST00000502781 ADGRL1O94910 1474 aa39.34■■■■□ 3.89
LSM6-202ENST00000502781 DENND4BO75064 1496 aaPredicted RBP39.31■■■■□ 3.88
LSM6-202ENST00000502781 SCAPERQ9BY12 1400 aa39.3■■■■□ 3.88
LSM6-202ENST00000502781 RAPGEF3O95398 923 aa39.3■■■■□ 3.88
LSM6-202ENST00000502781 CFDP1Q9UEE9 299 aaPredicted RBP39.29■■■■□ 3.88
LSM6-202ENST00000502781 FRMPD1Q5SYB0 1578 aa39.27■■■■□ 3.88
LSM6-202ENST00000502781 ITSN2Q9NZM3 1697 aa39.24■■■■□ 3.87
LSM6-202ENST00000502781 POGZQ7Z3K3 1410 aa39.22■■■■□ 3.87
LSM6-202ENST00000502781 ABCC1P33527 1531 aa39.21■■■■□ 3.87
LSM6-202ENST00000502781 RICTORQ6R327 1708 aa39.21■■■■□ 3.87
LSM6-202ENST00000502781 SAMD9LQ8IVG5 1584 aa39.21■■■■□ 3.87
LSM6-202ENST00000502781 ARHGEF12Q9NZN5 1544 aa39.19■■■■□ 3.86
LSM6-202ENST00000502781 ZNF777Q9ULD5 760 aaPredicted RBP39.18■■■■□ 3.86
LSM6-202ENST00000502781 KIAA1107Q9UPP5 1409 aa39.15■■■■□ 3.86
LSM6-202ENST00000502781 PLEKHH2Q8IVE3 1493 aa39.14■■■■□ 3.86
LSM6-202ENST00000502781 MYOM3Q5VTT5 1437 aa39.14■■■■□ 3.86
LSM6-202ENST00000502781 ZMYM4Q5VZL5 1548 aa39.13■■■■□ 3.85
LSM6-202ENST00000502781 ZNF518AQ6AHZ1 1483 aa39.12■■■■□ 3.85
LSM6-202ENST00000502781 ZNF644Q9H582 1327 aaPredicted RBP39.11■■■■□ 3.85
LSM6-202ENST00000502781 TRAPPC8Q9Y2L5 1435 aa39.09■■■■□ 3.85
LSM6-202ENST00000502781 MIA2Q96PC5 1412 aa39.09■■■■□ 3.85
LSM6-202ENST00000502781 AFAP1Q8N556 730 aa39.08■■■■□ 3.85
LSM6-202ENST00000502781 SYCP2Q9BX26 1530 aa39.07■■■■□ 3.85
LSM6-202ENST00000502781 KDM5CP41229 1560 aa39.07■■■■□ 3.85
LSM6-202ENST00000502781 MAGI2Q86UL8 1455 aa39.05■■■■□ 3.84
LSM6-202ENST00000502781 HNRNPMP52272 730 aaKnown RBP eCLIP39.04■■■■□ 3.84
LSM6-202ENST00000502781 CAMSAP2Q08AD1 1489 aa39.02■■■■□ 3.84
LSM6-202ENST00000502781 MBD5Q9P267 1494 aa39.02■■■■□ 3.84
LSM6-202ENST00000502781 MLH3Q9UHC1 1453 aa38.96■■■■□ 3.83
LSM6-202ENST00000502781 ARHGEF40Q8TER5 1519 aa38.96■■■■□ 3.83
LSM6-202ENST00000502781 YEATS2Q9ULM3 1422 aa38.95■■■■□ 3.83
LSM6-202ENST00000502781 FGD6Q6ZV73 1430 aa38.94■■■■□ 3.82
LSM6-202ENST00000502781 ZFYVE16Q7Z3T8 1539 aa38.94■■■■□ 3.82
LSM6-202ENST00000502781 HECW2Q9P2P5 1572 aa38.91■■■■□ 3.82
LSM6-202ENST00000502781 RSPH4AQ5TD94 716 aa38.89■■■■□ 3.82
LSM6-202ENST00000502781 PPARGC1BQ86YN6 1023 aaKnown RBP38.88■■■■□ 3.81
LSM6-202ENST00000502781 ARHGEF5Q12774 1597 aa38.86■■■■□ 3.81
LSM6-202ENST00000502781 TCOF1Q13428 1488 aaKnown RBP38.86■■■■□ 3.81
LSM6-202ENST00000502781 CCDC141Q6ZP82 1450 aa38.85■■■■□ 3.81
LSM6-202ENST00000502781 SPAG9O60271 1321 aaKnown RBP38.84■■■■□ 3.81
LSM6-202ENST00000502781 PTPN23Q9H3S7 1636 aa38.84■■■■□ 3.81
LSM6-202ENST00000502781 KIDINS220Q9ULH0 1771 aa38.81■■■■□ 3.8
LSM6-202ENST00000502781 ATP10AO60312 1499 aa38.81■■■■□ 3.8
LSM6-202ENST00000502781 INO80Q9ULG1 1556 aaPredicted RBP38.79■■■■□ 3.8
LSM6-202ENST00000502781 DIP2CQ9Y2E4 1556 aa38.78■■■■□ 3.8
LSM6-202ENST00000502781 RTEL1-TNFRSF6BF6WH68 1400 aa38.77■■■■□ 3.8
LSM6-202ENST00000502781 ATP7AQ04656 1500 aa38.76■■■■□ 3.8
LSM6-202ENST00000502781 MYT1LQ9UL68 1186 aa38.76■■■■□ 3.8
LSM6-202ENST00000502781 ABCA6Q8N139 1617 aa38.76■■■■□ 3.79
LSM6-202ENST00000502781 C9orf84Q5VXU9 1444 aa38.75■■■■□ 3.79
LSM6-202ENST00000502781 REREQ9P2R6 1566 aa38.7■■■■□ 3.79
LSM6-202ENST00000502781 TSPY4P0CV99 314 aa38.68■■■■□ 3.78
LSM6-202ENST00000502781 TSPY10P0CW01 314 aa38.68■■■■□ 3.78
LSM6-202ENST00000502781 ABCC5O15440 1437 aa38.67■■■■□ 3.78
LSM6-202ENST00000502781 SIGLEC1Q9BZZ2 1709 aa38.67■■■■□ 3.78
LSM6-202ENST00000502781 MAST1Q9Y2H9 1570 aa38.65■■■■□ 3.78
LSM6-202ENST00000502781 KDM4FA0A1W2PPD8 638 aa38.65■■■■□ 3.78
LSM6-202ENST00000502781 DNMT1P26358 1616 aaKnown RBP38.63■■■■□ 3.78
LSM6-202ENST00000502781 DAPK1P53355 1430 aa38.63■■■■□ 3.77
LSM6-202ENST00000502781 FAM50AQ14320 339 aaKnown RBP38.61■■■■□ 3.77
LSM6-202ENST00000502781 SHANK2Q9UPX8 1470 aa38.61■■■■□ 3.77
LSM6-202ENST00000502781 ARID4BQ4LE39 1312 aaPredicted RBP38.61■■■■□ 3.77
LSM6-202ENST00000502781 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.59■■■■□ 3.77
LSM6-202ENST00000502781 AGLP35573 1532 aa38.58■■■■□ 3.77
LSM6-202ENST00000502781 RRBP1Q9P2E9 1410 aaKnown RBP38.58■■■■□ 3.77
LSM6-202ENST00000502781 A2MP01023 1474 aa38.56■■■■□ 3.76
LSM6-202ENST00000502781 PLXNC1O60486 1568 aa38.55■■■■□ 3.76
LSM6-202ENST00000502781 CROCC2H7BZ55 1655 aa38.55■■■■□ 3.76
LSM6-202ENST00000502781 BCORL1Q5H9F3 1711 aa38.54■■■■□ 3.76
LSM6-202ENST00000502781 ADGBQ8N7X0 1667 aa38.52■■■■□ 3.76
LSM6-202ENST00000502781 DHX29Q7Z478 1369 aaKnown RBP38.5■■■■□ 3.75
LSM6-202ENST00000502781 ADAMTSL3P82987 1691 aa38.49■■■■□ 3.75
LSM6-202ENST00000502781 PTPRKQ15262 1439 aa38.43■■■■□ 3.74
LSM6-202ENST00000502781 ADGRL2O95490 1459 aa38.41■■■■□ 3.74
LSM6-202ENST00000502781 MLECQ14165 292 aa38.4■■■■□ 3.74
LSM6-202ENST00000502781 CHIC2Q9UKJ5 165 aa38.39■■■■□ 3.74
LSM6-202ENST00000502781 NCOA1Q15788 1441 aa38.39■■■■□ 3.74
LSM6-202ENST00000502781 ANKRD30AQ9BXX3 1397 aa38.37■■■■□ 3.73
LSM6-202ENST00000502781 KIF15Q9NS87 1388 aa38.37■■■■□ 3.73
LSM6-202ENST00000502781 MADDQ8WXG6 1647 aa38.35■■■■□ 3.73
LSM6-202ENST00000502781 DUOX2Q9NRD8 1548 aa38.34■■■■□ 3.73
LSM6-202ENST00000502781 RRP7BPQ9NSQ0 103 aa38.32■■■■□ 3.73
LSM6-202ENST00000502781 ROCK1Q13464 1354 aa38.29■■■■□ 3.72
LSM6-202ENST00000502781 KIF3BO15066 747 aa38.28■■■■□ 3.72
LSM6-202ENST00000502781 PTPRMP28827 1452 aa38.26■■■■□ 3.71
LSM6-202ENST00000502781 ERBINQ96RT1 1412 aa38.26■■■■□ 3.71
LSM6-202ENST00000502781 ITGAEP38570 1179 aa38.24■■■■□ 3.71
LSM6-202ENST00000502781 EIF2AK4Q9P2K8 1649 aaKnown RBP38.24■■■■□ 3.71
LSM6-202ENST00000502781 FER1L4A9Z1Z3 1794 aa38.23■■■■□ 3.71
LSM6-202ENST00000502781 PPP6R1Q9UPN7 881 aa38.23■■■■□ 3.71
LSM6-202ENST00000502781 GGT6Q6P531 493 aa38.22■■■■□ 3.71
LSM6-202ENST00000502781 RIMS1Q86UR5 1692 aaKnown RBP38.21■■■■□ 3.71
LSM6-202ENST00000502781 AEBP2Q6ZN18 517 aaPredicted RBP38.2■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms