RNA–Protein interactions for RNA: ENST00000497236.1

CRIM1-208, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 240 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-208ENST00000497236 MAP3K1Q13233 1512 aa3.78□□□□□ -1.8
CRIM1-208ENST00000497236 RNF123Q5XPI4 1314 aa3.77□□□□□ -1.81
CRIM1-208ENST00000497236 CENPJQ9HC77 1338 aaPredicted RBP3.77□□□□□ -1.81
CRIM1-208ENST00000497236 MTERF4Q7Z6M4 381 aaKnown RBP3.77□□□□□ -1.81
CRIM1-208ENST00000497236 CCDC61Q9Y6R9 512 aa3.77□□□□□ -1.81
CRIM1-208ENST00000497236 CCNB3Q8WWL7 1395 aa3.76□□□□□ -1.81
CRIM1-208ENST00000497236 ITGAEP38570 1179 aa3.76□□□□□ -1.81
CRIM1-208ENST00000497236 TERF1P54274 439 aa3.76□□□□□ -1.81
CRIM1-208ENST00000497236 HNRNPUQ00839 825 aaKnown RBP eCLIP3.76□□□□□ -1.81
CRIM1-208ENST00000497236 HSP90AA2PQ14568 343 aaPredicted RBP3.76□□□□□ -1.81
CRIM1-208ENST00000497236 NBR1Q14596 966 aa3.76□□□□□ -1.81
CRIM1-208ENST00000497236 CIZ1Q9ULV3 898 aaPredicted RBP3.76□□□□□ -1.81
CRIM1-208ENST00000497236 SETD5Q9C0A6 1442 aa3.76□□□□□ -1.81
CRIM1-208ENST00000497236 SMARCA2P51531 1590 aa3.76□□□□□ -1.81
CRIM1-208ENST00000497236 BAZ1AQ9NRL2 1556 aaPredicted RBP3.76□□□□□ -1.81
CRIM1-208ENST00000497236 GABBR2O75899 941 aa3.75□□□□□ -1.81
CRIM1-208ENST00000497236 PDE3BQ13370 1112 aa3.75□□□□□ -1.81
CRIM1-208ENST00000497236 TRIM52Q96A61 297 aa3.75□□□□□ -1.81
CRIM1-208ENST00000497236 PHF12Q96QT6 1004 aa3.75□□□□□ -1.81
CRIM1-208ENST00000497236 PODXL2Q9NZ53 605 aa3.75□□□□□ -1.81
CRIM1-208ENST00000497236 FHAD1B1AJZ9 1412 aa3.75□□□□□ -1.81
CRIM1-208ENST00000497236 SMG6Q86US8 1419 aaKnown RBP3.75□□□□□ -1.81
CRIM1-208ENST00000497236 KTN1Q86UP2 1357 aaKnown RBP3.75□□□□□ -1.81
CRIM1-208ENST00000497236 HSP90AA1P07900 732 aaKnown RBP3.74□□□□□ -1.81
CRIM1-208ENST00000497236 TPM2P07951 284 aa3.74□□□□□ -1.81
CRIM1-208ENST00000497236 EIF4G1Q04637 1599 aaKnown RBP3.74□□□□□ -1.81
CRIM1-208ENST00000497236 ZNF326Q5BKZ1 582 aaKnown RBP3.74□□□□□ -1.81
CRIM1-208ENST00000497236 IL27Q8NEV9 243 aa3.74□□□□□ -1.81
CRIM1-208ENST00000497236 KIF12Q96FN5 646 aa3.74□□□□□ -1.81
CRIM1-208ENST00000497236 SGIP1Q9BQI5 828 aa3.74□□□□□ -1.81
CRIM1-208ENST00000497236 ZMYND15Q9H091 742 aa3.74□□□□□ -1.81
CRIM1-208ENST00000497236 PDCL3Q9H2J4 239 aa3.74□□□□□ -1.81
CRIM1-208ENST00000497236 CCDC88BA6NC98 1476 aa3.73□□□□□ -1.81
CRIM1-208ENST00000497236 NCAPD3P42695 1498 aa3.73□□□□□ -1.81
CRIM1-208ENST00000497236 NACADO15069 1562 aa3.73□□□□□ -1.81
CRIM1-208ENST00000497236 PYGBP11216 843 aa3.73□□□□□ -1.81
CRIM1-208ENST00000497236 PTMSP20962 102 aa3.73□□□□□ -1.81
CRIM1-208ENST00000497236 CLCN1P35523 988 aa3.73□□□□□ -1.81
CRIM1-208ENST00000497236 CALD1Q05682 793 aaKnown RBP3.73□□□□□ -1.81
CRIM1-208ENST00000497236 DCBLD2Q96PD2 775 aa3.73□□□□□ -1.81
CRIM1-208ENST00000497236 BACH2Q9BYV9 841 aa3.73□□□□□ -1.81
CRIM1-208ENST00000497236 PNNQ9H307 717 aaKnown RBP3.73□□□□□ -1.81
CRIM1-208ENST00000497236 PCDHB13Q9Y5F0 798 aa3.73□□□□□ -1.81
CRIM1-208ENST00000497236 TOP2AP11388 1531 aaKnown RBP3.73□□□□□ -1.81
CRIM1-208ENST00000497236 ERICH3Q5RHP9 1530 aa3.73□□□□□ -1.81
CRIM1-208ENST00000497236 INSRP06213 1382 aa3.73□□□□□ -1.81
CRIM1-208ENST00000497236 SOGA1O94964 1423 aa3.72□□□□□ -1.81
CRIM1-208ENST00000497236 MAP3K13O43283 966 aa3.72□□□□□ -1.81
CRIM1-208ENST00000497236 CHRM1P11229 460 aaPredicted RBP3.72□□□□□ -1.81
CRIM1-208ENST00000497236 PDE4AP27815 886 aa3.72□□□□□ -1.81
CRIM1-208ENST00000497236 RANGAP1P46060 587 aaPredicted RBP3.72□□□□□ -1.81
CRIM1-208ENST00000497236 KCNH8Q96L42 1107 aa3.72□□□□□ -1.81
CRIM1-208ENST00000497236 NUDCQ9Y266 331 aa3.72□□□□□ -1.81
CRIM1-208ENST00000497236 TONSLQ96HA7 1378 aa3.72□□□□□ -1.81
CRIM1-208ENST00000497236 RAB3GAP2Q9H2M9 1393 aa3.72□□□□□ -1.81
CRIM1-208ENST00000497236 GALR2O43603 387 aaPredicted RBP3.71□□□□□ -1.82
CRIM1-208ENST00000497236 EIF4G2P78344 907 aaKnown RBP eCLIP3.71□□□□□ -1.82
CRIM1-208ENST00000497236 BECN1Q14457 450 aa3.71□□□□□ -1.82
CRIM1-208ENST00000497236 NFKBIBQ15653 356 aa3.71□□□□□ -1.82
CRIM1-208ENST00000497236 TAF3Q5VWG9 929 aa3.71□□□□□ -1.82
CRIM1-208ENST00000497236 ZNF467Q7Z7K2 595 aaPredicted RBP3.71□□□□□ -1.82
CRIM1-208ENST00000497236 VSIG10Q8N0Z9 540 aa3.71□□□□□ -1.82
CRIM1-208ENST00000497236 MS4A3Q96HJ5 214 aa3.71□□□□□ -1.82
CRIM1-208ENST00000497236 MROH2BQ7Z745 1585 aa3.71□□□□□ -1.82
CRIM1-208ENST00000497236 CCDC144AA2RUR9 1427 aa3.7□□□□□ -1.82
CRIM1-208ENST00000497236 TNNT2P45379 298 aaPredicted RBP3.7□□□□□ -1.82
CRIM1-208ENST00000497236 AAMPQ13685 434 aa3.7□□□□□ -1.82
CRIM1-208ENST00000497236 B4GALNT3Q6L9W6 998 aa3.7□□□□□ -1.82
CRIM1-208ENST00000497236 PRKRIP1Q9H875 184 aaPredicted RBP3.7□□□□□ -1.82
CRIM1-208ENST00000497236 TAOK2Q9UL54 1235 aa3.7□□□□□ -1.82
CRIM1-208ENST00000497236 ROCK2O75116 1388 aaKnown RBP3.7□□□□□ -1.82
CRIM1-208ENST00000497236 CCDC18Q5T9S5 1454 aa3.69□□□□□ -1.82
CRIM1-208ENST00000497236 ZMYM3Q14202 1370 aa3.69□□□□□ -1.82
CRIM1-208ENST00000497236 MRE11P49959 708 aa3.69□□□□□ -1.82
CRIM1-208ENST00000497236 IFNL1Q8IU54 200 aa3.69□□□□□ -1.82
CRIM1-208ENST00000497236 TRIM44Q96DX7 344 aaPredicted RBP3.69□□□□□ -1.82
CRIM1-208ENST00000497236 MRS2Q9HD23 443 aa3.69□□□□□ -1.82
CRIM1-208ENST00000497236 MAPKBP1O60336 1514 aa3.69□□□□□ -1.82
CRIM1-208ENST00000497236 CNTLNQ9NXG0 1405 aa3.69□□□□□ -1.82
CRIM1-208ENST00000497236 PHLDB1Q86UU1 1377 aa3.68□□□□□ -1.82
CRIM1-208ENST00000497236 ECM2O94769 699 aaPredicted RBP3.68□□□□□ -1.82
CRIM1-208ENST00000497236 TIE1P35590 1138 aa3.68□□□□□ -1.82
CRIM1-208ENST00000497236 HS1BP3Q53T59 392 aa3.68□□□□□ -1.82
CRIM1-208ENST00000497236 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.68□□□□□ -1.82
CRIM1-208ENST00000497236 ZMYM4Q5VZL5 1548 aa3.68□□□□□ -1.82
CRIM1-208ENST00000497236 UACAQ9BZF9 1416 aa3.68□□□□□ -1.82
CRIM1-208ENST00000497236 NCOA2Q15596 1464 aa3.67□□□□□ -1.82
CRIM1-208ENST00000497236 PRXQ9BXM0 1461 aa3.67□□□□□ -1.82
CRIM1-208ENST00000497236 WDR97A6NE52 1622 aa3.67□□□□□ -1.82
CRIM1-208ENST00000497236 GOLGA6L3A6NEY3 463 aa3.67□□□□□ -1.82
CRIM1-208ENST00000497236 FGD1P98174 961 aa3.67□□□□□ -1.82
CRIM1-208ENST00000497236 SKOR2Q2VWA4 1001 aaPredicted RBP3.67□□□□□ -1.82
CRIM1-208ENST00000497236 FAM161AQ3B820 660 aa3.67□□□□□ -1.82
CRIM1-208ENST00000497236 UTP14CQ5TAP6 766 aaKnown RBP3.67□□□□□ -1.82
CRIM1-208ENST00000497236 SMAP1Q8IYB5 467 aaPredicted RBP3.67□□□□□ -1.82
CRIM1-208ENST00000497236 NGEFQ8N5V2 710 aa3.67□□□□□ -1.82
CRIM1-208ENST00000497236 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.67□□□□□ -1.82
CRIM1-208ENST00000497236 ANP32BQ92688 251 aaKnown RBP3.67□□□□□ -1.82
CRIM1-208ENST00000497236 FRAT1Q92837 279 aaPredicted RBP3.67□□□□□ -1.82
CRIM1-208ENST00000497236 NAP1L5Q96NT1 182 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms