RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 CFAP74Q9C0B2 1584 aa24.54■■□□□ 1.52
PMF1-205ENST00000497069 PREX2Q70Z35 1606 aa24.54■■□□□ 1.52
PMF1-205ENST00000497069 CFDP1Q9UEE9 299 aaPredicted RBP24.54■■□□□ 1.52
PMF1-205ENST00000497069 PPARGC1BQ86YN6 1023 aaKnown RBP24.52■■□□□ 1.52
PMF1-205ENST00000497069 CDC42BPAQ5VT25 1732 aa24.52■■□□□ 1.52
PMF1-205ENST00000497069 ITSN2Q9NZM3 1697 aa24.51■■□□□ 1.51
PMF1-205ENST00000497069 ZNF777Q9ULD5 760 aaPredicted RBP24.5■■□□□ 1.51
PMF1-205ENST00000497069 AKNAQ7Z591 1439 aa24.5■■□□□ 1.51
PMF1-205ENST00000497069 CDC42BPBQ9Y5S2 1711 aa24.49■■□□□ 1.51
PMF1-205ENST00000497069 KDM6BO15054 1643 aa24.46■■□□□ 1.51
PMF1-205ENST00000497069 ADGRL1O94910 1474 aa24.45■■□□□ 1.51
PMF1-205ENST00000497069 MYOM3Q5VTT5 1437 aa24.45■■□□□ 1.51
PMF1-205ENST00000497069 SCAPERQ9BY12 1400 aa24.42■■□□□ 1.5
PMF1-205ENST00000497069 MIA2Q96PC5 1412 aa24.41■■□□□ 1.5
PMF1-205ENST00000497069 PLEKHH2Q8IVE3 1493 aa24.4■■□□□ 1.5
PMF1-205ENST00000497069 DENND4BO75064 1496 aaPredicted RBP24.39■■□□□ 1.5
PMF1-205ENST00000497069 COL17A1Q9UMD9 1497 aaPredicted RBP24.38■■□□□ 1.49
PMF1-205ENST00000497069 SAMD9LQ8IVG5 1584 aa24.37■■□□□ 1.49
PMF1-205ENST00000497069 ZNF644Q9H582 1327 aaPredicted RBP24.36■■□□□ 1.49
PMF1-205ENST00000497069 ABCC1P33527 1531 aa24.36■■□□□ 1.49
PMF1-205ENST00000497069 RAPGEF3O95398 923 aa24.36■■□□□ 1.49
PMF1-205ENST00000497069 FGD6Q6ZV73 1430 aa24.35■■□□□ 1.49
PMF1-205ENST00000497069 CAMSAP2Q08AD1 1489 aa24.35■■□□□ 1.49
PMF1-205ENST00000497069 KIAA1107Q9UPP5 1409 aa24.34■■□□□ 1.49
PMF1-205ENST00000497069 HNRNPMP52272 730 aaKnown RBP eCLIP24.33■■□□□ 1.49
PMF1-205ENST00000497069 POGZQ7Z3K3 1410 aa24.33■■□□□ 1.49
PMF1-205ENST00000497069 SYCP2Q9BX26 1530 aa24.32■■□□□ 1.48
PMF1-205ENST00000497069 ZNF518AQ6AHZ1 1483 aa24.31■■□□□ 1.48
PMF1-205ENST00000497069 ARHGEF12Q9NZN5 1544 aa24.3■■□□□ 1.48
PMF1-205ENST00000497069 PTPN23Q9H3S7 1636 aa24.28■■□□□ 1.48
PMF1-205ENST00000497069 AFAP1Q8N556 730 aa24.28■■□□□ 1.48
PMF1-205ENST00000497069 TRAPPC8Q9Y2L5 1435 aa24.27■■□□□ 1.48
PMF1-205ENST00000497069 FAM50AQ14320 339 aaKnown RBP24.27■■□□□ 1.48
PMF1-205ENST00000497069 RSPH4AQ5TD94 716 aa24.27■■□□□ 1.48
PMF1-205ENST00000497069 MYT1LQ9UL68 1186 aa24.27■■□□□ 1.48
PMF1-205ENST00000497069 RICTORQ6R327 1708 aa24.27■■□□□ 1.48
PMF1-205ENST00000497069 FRMPD1Q5SYB0 1578 aa24.26■■□□□ 1.47
PMF1-205ENST00000497069 TCOF1Q13428 1488 aaKnown RBP24.26■■□□□ 1.47
PMF1-205ENST00000497069 MBD5Q9P267 1494 aa24.24■■□□□ 1.47
PMF1-205ENST00000497069 CCDC141Q6ZP82 1450 aa24.22■■□□□ 1.47
PMF1-205ENST00000497069 ZMYM4Q5VZL5 1548 aa24.21■■□□□ 1.47
PMF1-205ENST00000497069 SPAG9O60271 1321 aaKnown RBP24.21■■□□□ 1.47
PMF1-205ENST00000497069 KDM5CP41229 1560 aa24.2■■□□□ 1.47
PMF1-205ENST00000497069 ARHGEF5Q12774 1597 aa24.2■■□□□ 1.47
PMF1-205ENST00000497069 MAGI2Q86UL8 1455 aa24.2■■□□□ 1.47
PMF1-205ENST00000497069 TSPY4P0CV99 314 aa24.2■■□□□ 1.46
PMF1-205ENST00000497069 TSPY10P0CW01 314 aa24.2■■□□□ 1.46
PMF1-205ENST00000497069 MLH3Q9UHC1 1453 aa24.17■■□□□ 1.46
PMF1-205ENST00000497069 HECW2Q9P2P5 1572 aa24.16■■□□□ 1.46
PMF1-205ENST00000497069 RRBP1Q9P2E9 1410 aaKnown RBP24.16■■□□□ 1.46
PMF1-205ENST00000497069 ZFYVE16Q7Z3T8 1539 aa24.15■■□□□ 1.46
PMF1-205ENST00000497069 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.14■■□□□ 1.45
PMF1-205ENST00000497069 DAPK1P53355 1430 aa24.13■■□□□ 1.45
PMF1-205ENST00000497069 YEATS2Q9ULM3 1422 aa24.12■■□□□ 1.45
PMF1-205ENST00000497069 RTEL1-TNFRSF6BF6WH68 1400 aa24.11■■□□□ 1.45
PMF1-205ENST00000497069 ABCC5O15440 1437 aa24.11■■□□□ 1.45
PMF1-205ENST00000497069 ATP7AQ04656 1500 aa24.11■■□□□ 1.45
PMF1-205ENST00000497069 DNMT1P26358 1616 aaKnown RBP24.11■■□□□ 1.45
PMF1-205ENST00000497069 ARHGEF40Q8TER5 1519 aa24.1■■□□□ 1.45
PMF1-205ENST00000497069 C9orf84Q5VXU9 1444 aa24.1■■□□□ 1.45
PMF1-205ENST00000497069 INO80Q9ULG1 1556 aaPredicted RBP24.09■■□□□ 1.45
PMF1-205ENST00000497069 SHANK2Q9UPX8 1470 aa24.08■■□□□ 1.45
PMF1-205ENST00000497069 ITGAEP38570 1179 aa24.08■■□□□ 1.45
PMF1-205ENST00000497069 KIDINS220Q9ULH0 1771 aa24.07■■□□□ 1.44
PMF1-205ENST00000497069 ATP10AO60312 1499 aa24.07■■□□□ 1.44
PMF1-205ENST00000497069 MAST1Q9Y2H9 1570 aa24.06■■□□□ 1.44
PMF1-205ENST00000497069 CROCC2H7BZ55 1655 aa24.05■■□□□ 1.44
PMF1-205ENST00000497069 CHIC2Q9UKJ5 165 aa24.05■■□□□ 1.44
PMF1-205ENST00000497069 DIP2CQ9Y2E4 1556 aa24.04■■□□□ 1.44
PMF1-205ENST00000497069 ABCA6Q8N139 1617 aa24.03■■□□□ 1.44
PMF1-205ENST00000497069 ARID4BQ4LE39 1312 aaPredicted RBP24.02■■□□□ 1.44
PMF1-205ENST00000497069 ANKRD30AQ9BXX3 1397 aa24.01■■□□□ 1.43
PMF1-205ENST00000497069 A2MP01023 1474 aa23.98■■□□□ 1.43
PMF1-205ENST00000497069 PTPRKQ15262 1439 aa23.97■■□□□ 1.43
PMF1-205ENST00000497069 RRP7BPQ9NSQ0 103 aa23.97■■□□□ 1.43
PMF1-205ENST00000497069 ADGBQ8N7X0 1667 aa23.96■■□□□ 1.43
PMF1-205ENST00000497069 PLXNC1O60486 1568 aa23.96■■□□□ 1.43
PMF1-205ENST00000497069 REREQ9P2R6 1566 aa23.96■■□□□ 1.43
PMF1-205ENST00000497069 ADGRL2O95490 1459 aa23.95■■□□□ 1.42
PMF1-205ENST00000497069 DHX29Q7Z478 1369 aaKnown RBP23.95■■□□□ 1.42
PMF1-205ENST00000497069 KIF15Q9NS87 1388 aa23.95■■□□□ 1.42
PMF1-205ENST00000497069 NCOA1Q15788 1441 aa23.93■■□□□ 1.42
PMF1-205ENST00000497069 ROCK1Q13464 1354 aa23.92■■□□□ 1.42
PMF1-205ENST00000497069 DUOX2Q9NRD8 1548 aa23.91■■□□□ 1.42
PMF1-205ENST00000497069 AGLP35573 1532 aa23.89■■□□□ 1.42
PMF1-205ENST00000497069 MLECQ14165 292 aa23.88■■□□□ 1.41
PMF1-205ENST00000497069 SIGLEC1Q9BZZ2 1709 aa23.86■■□□□ 1.41
PMF1-205ENST00000497069 ERBINQ96RT1 1412 aa23.85■■□□□ 1.41
PMF1-205ENST00000497069 KIF3BO15066 747 aa23.85■■□□□ 1.41
PMF1-205ENST00000497069 GGT6Q6P531 493 aa23.82■■□□□ 1.4
PMF1-205ENST00000497069 ANKRD50Q9ULJ7 1429 aa23.82■■□□□ 1.4
PMF1-205ENST00000497069 EIF2AK4Q9P2K8 1649 aaKnown RBP23.81■■□□□ 1.4
PMF1-205ENST00000497069 BCORL1Q5H9F3 1711 aa23.8■■□□□ 1.4
PMF1-205ENST00000497069 ESF1Q9H501 851 aaKnown RBP23.8■■□□□ 1.4
PMF1-205ENST00000497069 TRIM26Q12899 539 aaPredicted RBP23.78■■□□□ 1.4
PMF1-205ENST00000497069 HFM1A2PYH4 1435 aa23.76■■□□□ 1.39
PMF1-205ENST00000497069 NAIPQ13075 1403 aa23.76■■□□□ 1.39
PMF1-205ENST00000497069 PPP6R1Q9UPN7 881 aa23.74■■□□□ 1.39
PMF1-205ENST00000497069 KDM4FA0A1W2PPD8 638 aa23.73■■□□□ 1.39
PMF1-205ENST00000497069 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms