RNA–Protein interactions for RNA: ENST00000496722.1

UBE2L3-203, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2

Gene UBE2L3, Length 3,451 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-203ENST00000496722 CNTLNQ9NXG0 1405 aa19.52■□□□□ 0.72
UBE2L3-203ENST00000496722 ARHGEF11O15085 1522 aa19.52■□□□□ 0.71
UBE2L3-203ENST00000496722 KIF7Q2M1P5 1343 aa19.51■□□□□ 0.71
UBE2L3-203ENST00000496722 PDS5BQ9NTI5 1447 aa19.5■□□□□ 0.71
UBE2L3-203ENST00000496722 KIF21AQ7Z4S6 1674 aa19.48■□□□□ 0.71
UBE2L3-203ENST00000496722 TCOF1Q13428 1488 aaKnown RBP19.47■□□□□ 0.71
UBE2L3-203ENST00000496722 ANKRD30BQ9BXX2 1392 aa19.46■□□□□ 0.71
UBE2L3-203ENST00000496722 NCOA1Q15788 1441 aa19.45■□□□□ 0.7
UBE2L3-203ENST00000496722 HECW1Q76N89 1606 aa19.45■□□□□ 0.7
UBE2L3-203ENST00000496722 GCC2Q8IWJ2 1684 aa19.44■□□□□ 0.7
UBE2L3-203ENST00000496722 PPP4R2Q9NY27 417 aa19.44■□□□□ 0.7
UBE2L3-203ENST00000496722 BCL11AQ9H165 835 aa19.43■□□□□ 0.7
UBE2L3-203ENST00000496722 ABCC5O15440 1437 aa19.42■□□□□ 0.7
UBE2L3-203ENST00000496722 DAPK1P53355 1430 aa19.42■□□□□ 0.7
UBE2L3-203ENST00000496722 IQGAP2Q13576 1575 aa19.42■□□□□ 0.7
UBE2L3-203ENST00000496722 TARBP1Q13395 1621 aaKnown RBP19.42■□□□□ 0.7
UBE2L3-203ENST00000496722 ERICH6Q7L0X2 663 aa19.39■□□□□ 0.69
UBE2L3-203ENST00000496722 ZNF608Q9ULD9 1512 aaPredicted RBP19.39■□□□□ 0.69
UBE2L3-203ENST00000496722 AKNAQ7Z591 1439 aa19.38■□□□□ 0.69
UBE2L3-203ENST00000496722 FBLN2P98095 1184 aa19.38■□□□□ 0.69
UBE2L3-203ENST00000496722 RPRD2Q5VT52 1461 aaKnown RBP19.38■□□□□ 0.69
UBE2L3-203ENST00000496722 WDR62O43379 1518 aa19.38■□□□□ 0.69
UBE2L3-203ENST00000496722 MIA2Q96PC5 1412 aa19.38■□□□□ 0.69
UBE2L3-203ENST00000496722 ZBED9Q6R2W3 1325 aa19.37■□□□□ 0.69
UBE2L3-203ENST00000496722 TEX14Q8IWB6 1497 aa19.37■□□□□ 0.69
UBE2L3-203ENST00000496722 PRG4Q92954 1404 aaPredicted RBP19.37■□□□□ 0.69
UBE2L3-203ENST00000496722 KDM2AQ9Y2K7 1162 aa19.37■□□□□ 0.69
UBE2L3-203ENST00000496722 CFDP1Q9UEE9 299 aaPredicted RBP19.36■□□□□ 0.69
UBE2L3-203ENST00000496722 PKD2Q13563 968 aa19.36■□□□□ 0.69
UBE2L3-203ENST00000496722 SPATA31E1Q6ZUB1 1445 aa19.34■□□□□ 0.69
UBE2L3-203ENST00000496722 SALL2Q9Y467 1007 aaPredicted RBP19.34■□□□□ 0.69
UBE2L3-203ENST00000496722 PBRM1Q86U86 1689 aa19.34■□□□□ 0.69
UBE2L3-203ENST00000496722 FANCIQ9NVI1 1328 aa19.33■□□□□ 0.68
UBE2L3-203ENST00000496722 NUP153P49790 1475 aaKnown RBP19.31■□□□□ 0.68
UBE2L3-203ENST00000496722 ADAMTS12P58397 1594 aa19.3■□□□□ 0.68
UBE2L3-203ENST00000496722 USP47Q96K76 1375 aa19.29■□□□□ 0.68
UBE2L3-203ENST00000496722 PZPP20742 1482 aa19.28■□□□□ 0.68
UBE2L3-203ENST00000496722 DISP1Q96F81 1524 aa19.28■□□□□ 0.68
UBE2L3-203ENST00000496722 DHX29Q7Z478 1369 aaKnown RBP19.27■□□□□ 0.68
UBE2L3-203ENST00000496722 ROCK1Q13464 1354 aa19.27■□□□□ 0.67
UBE2L3-203ENST00000496722 PLB1Q6P1J6 1458 aa19.25■□□□□ 0.67
UBE2L3-203ENST00000496722 DNMT1P26358 1616 aaKnown RBP19.24■□□□□ 0.67
UBE2L3-203ENST00000496722 BCORL1Q5H9F3 1711 aa19.24■□□□□ 0.67
UBE2L3-203ENST00000496722 PAK3O75914 559 aaPredicted RBP19.23■□□□□ 0.67
UBE2L3-203ENST00000496722 NBR1Q14596 966 aa19.23■□□□□ 0.67
UBE2L3-203ENST00000496722 TMC1Q8TDI8 760 aa19.23■□□□□ 0.67
UBE2L3-203ENST00000496722 CARD11Q9BXL7 1154 aa19.23■□□□□ 0.67
UBE2L3-203ENST00000496722 CAMSAP2Q08AD1 1489 aa19.22■□□□□ 0.67
UBE2L3-203ENST00000496722 CCDC136Q96JN2 1154 aa19.22■□□□□ 0.67
UBE2L3-203ENST00000496722 ST20-MTHFSA0A0A6YYL1 179 aa19.21■□□□□ 0.67
UBE2L3-203ENST00000496722 ERICH6BQ5W0A0 696 aa19.2■□□□□ 0.66
UBE2L3-203ENST00000496722 CHMP7Q8WUX9 453 aaPredicted RBP19.2■□□□□ 0.66
UBE2L3-203ENST00000496722 NUDCQ9Y266 331 aa19.2■□□□□ 0.66
UBE2L3-203ENST00000496722 KIAA0556O60303 1618 aa19.2■□□□□ 0.66
UBE2L3-203ENST00000496722 DCAF11Q8TEB1 546 aa19.2■□□□□ 0.66
UBE2L3-203ENST00000496722 NUP155O75694 1391 aa19.19■□□□□ 0.66
UBE2L3-203ENST00000496722 PNISRQ8TF01 805 aaKnown RBP19.18■□□□□ 0.66
UBE2L3-203ENST00000496722 KIF14Q15058 1648 aa19.18■□□□□ 0.66
UBE2L3-203ENST00000496722 HNRNPMP52272 730 aaKnown RBP eCLIP19.17■□□□□ 0.663e-7■■■■□ 23.5
UBE2L3-203ENST00000496722 KIAA1107Q9UPP5 1409 aa19.17■□□□□ 0.66
UBE2L3-203ENST00000496722 GPATCH8Q9UKJ3 1502 aaKnown RBP19.17■□□□□ 0.66
UBE2L3-203ENST00000496722 KIAA0586Q9BVV6 1533 aa19.17■□□□□ 0.66
UBE2L3-203ENST00000496722 RAPGEF6Q8TEU7 1601 aa19.16■□□□□ 0.66
UBE2L3-203ENST00000496722 RGL3Q3MIN7 710 aa19.16■□□□□ 0.66
UBE2L3-203ENST00000496722 MRC2Q9UBG0 1479 aa19.16■□□□□ 0.66
UBE2L3-203ENST00000496722 TROQ12816 1431 aaPredicted RBP19.15■□□□□ 0.66
UBE2L3-203ENST00000496722 SMG6Q86US8 1419 aaKnown RBP19.14■□□□□ 0.65
UBE2L3-203ENST00000496722 ANKRD50Q9ULJ7 1429 aa19.13■□□□□ 0.65
UBE2L3-203ENST00000496722 MBD5Q9P267 1494 aa19.12■□□□□ 0.65
UBE2L3-203ENST00000496722 GRIN2AQ12879 1464 aa19.11■□□□□ 0.65
UBE2L3-203ENST00000496722 ANKRD30AQ9BXX3 1397 aa19.11■□□□□ 0.65
UBE2L3-203ENST00000496722 JPH4Q96JJ6 628 aa19.1■□□□□ 0.65
UBE2L3-203ENST00000496722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.09■□□□□ 0.652e-11■■■□□ 17.3
UBE2L3-203ENST00000496722 NOP58Q9Y2X3 529 aaKnown RBP19.09■□□□□ 0.65
UBE2L3-203ENST00000496722 NPM2Q86SE8 214 aaKnown RBP19.09■□□□□ 0.65
UBE2L3-203ENST00000496722 SKAP1Q86WV1 359 aa19.09■□□□□ 0.65
UBE2L3-203ENST00000496722 PLEKHD1A6NEE1 506 aa19.08■□□□□ 0.65
UBE2L3-203ENST00000496722 NBPF1Q3BBV0 1214 aa19.08■□□□□ 0.64
UBE2L3-203ENST00000496722 EXOC6Q8TAG9 804 aa19.08■□□□□ 0.64
UBE2L3-203ENST00000496722 KDM5CP41229 1560 aa19.07■□□□□ 0.64
UBE2L3-203ENST00000496722 TSPY4P0CV99 314 aa19.06■□□□□ 0.64
UBE2L3-203ENST00000496722 TSPY10P0CW01 314 aa19.06■□□□□ 0.64
UBE2L3-203ENST00000496722 CDCA7LQ96GN5 454 aa19.06■□□□□ 0.64
UBE2L3-203ENST00000496722 DEKP35659 375 aaKnown RBP19.06■□□□□ 0.64
UBE2L3-203ENST00000496722 IFT140Q96RY7 1462 aa19.05■□□□□ 0.64
UBE2L3-203ENST00000496722 POLR1AO95602 1720 aaPredicted RBP19.05■□□□□ 0.64
UBE2L3-203ENST00000496722 CC2D1BQ5T0F9 858 aaKnown RBP19.05■□□□□ 0.64
UBE2L3-203ENST00000496722 PLIN1O60240 522 aa19.04■□□□□ 0.64
UBE2L3-203ENST00000496722 RNF123Q5XPI4 1314 aa19.03■□□□□ 0.64
UBE2L3-203ENST00000496722 ROCK2O75116 1388 aaKnown RBP19.03■□□□□ 0.64
UBE2L3-203ENST00000496722 C9orf84Q5VXU9 1444 aa19.02■□□□□ 0.64
UBE2L3-203ENST00000496722 EIF4G3O43432 1585 aaKnown RBP19.02■□□□□ 0.64
UBE2L3-203ENST00000496722 CEP170Q5SW79 1584 aa19.01■□□□□ 0.63
UBE2L3-203ENST00000496722 KIF15Q9NS87 1388 aa19■□□□□ 0.63
UBE2L3-203ENST00000496722 MYBBP1AQ9BQG0 1328 aaKnown RBP18.99■□□□□ 0.63
UBE2L3-203ENST00000496722 RRP1P56182 461 aaKnown RBP18.98■□□□□ 0.63
UBE2L3-203ENST00000496722 ADGBQ8N7X0 1667 aa18.98■□□□□ 0.63
UBE2L3-203ENST00000496722 RCAN3Q9UKA8 241 aa18.97■□□□□ 0.63
UBE2L3-203ENST00000496722 ADGRL2O95490 1459 aa18.97■□□□□ 0.63
UBE2L3-203ENST00000496722 RALGAPBQ86X10 1494 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 277.7 ms