RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 GPATCH8Q9UKJ3 1502 aaKnown RBP28.47■■■□□ 2.15
TSSC4-210ENST00000496468 PPARGC1BQ86YN6 1023 aaKnown RBP28.45■■■□□ 2.14
TSSC4-210ENST00000496468 FANCAO15360 1455 aa28.43■■■□□ 2.14
TSSC4-210ENST00000496468 MYOM3Q5VTT5 1437 aa28.43■■■□□ 2.14
TSSC4-210ENST00000496468 PHLDB1Q86UU1 1377 aa28.42■■■□□ 2.14
TSSC4-210ENST00000496468 NEO1Q92859 1461 aa28.4■■■□□ 2.14
TSSC4-210ENST00000496468 SAMD9LQ8IVG5 1584 aa28.36■■■□□ 2.13
TSSC4-210ENST00000496468 CFDP1Q9UEE9 299 aaPredicted RBP28.34■■■□□ 2.13
TSSC4-210ENST00000496468 MIA2Q96PC5 1412 aa28.34■■■□□ 2.13
TSSC4-210ENST00000496468 ABCC1P33527 1531 aa28.33■■■□□ 2.13
TSSC4-210ENST00000496468 EFCAB2Q5VUJ9 269 aa28.32■■■□□ 2.12
TSSC4-210ENST00000496468 FGD6Q6ZV73 1430 aa28.32■■■□□ 2.12
TSSC4-210ENST00000496468 AKNAQ7Z591 1439 aa28.31■■■□□ 2.12
TSSC4-210ENST00000496468 PTPN23Q9H3S7 1636 aa28.3■■■□□ 2.12
TSSC4-210ENST00000496468 ADGRL1O94910 1474 aa28.3■■■□□ 2.12
TSSC4-210ENST00000496468 CAMSAP2Q08AD1 1489 aa28.3■■■□□ 2.12
TSSC4-210ENST00000496468 PLEKHH2Q8IVE3 1493 aa28.27■■■□□ 2.12
TSSC4-210ENST00000496468 SYCP2Q9BX26 1530 aa28.27■■■□□ 2.12
TSSC4-210ENST00000496468 KDM6BO15054 1643 aa28.26■■■□□ 2.11
TSSC4-210ENST00000496468 ZNF777Q9ULD5 760 aaPredicted RBP28.26■■■□□ 2.11
TSSC4-210ENST00000496468 TCOF1Q13428 1488 aaKnown RBP28.23■■■□□ 2.11
TSSC4-210ENST00000496468 SCAPERQ9BY12 1400 aa28.2■■■□□ 2.11
TSSC4-210ENST00000496468 POGZQ7Z3K3 1410 aa28.19■■■□□ 2.1
TSSC4-210ENST00000496468 KIAA1107Q9UPP5 1409 aa28.19■■■□□ 2.1
TSSC4-210ENST00000496468 RICTORQ6R327 1708 aa28.19■■■□□ 2.1
TSSC4-210ENST00000496468 DENND4BO75064 1496 aaPredicted RBP28.19■■■□□ 2.1
TSSC4-210ENST00000496468 FRMPD1Q5SYB0 1578 aa28.19■■■□□ 2.1
TSSC4-210ENST00000496468 ARHGEF12Q9NZN5 1544 aa28.18■■■□□ 2.1
TSSC4-210ENST00000496468 RRBP1Q9P2E9 1410 aaKnown RBP28.18■■■□□ 2.1
TSSC4-210ENST00000496468 ZNF644Q9H582 1327 aaPredicted RBP28.18■■■□□ 2.1
TSSC4-210ENST00000496468 ARHGEF5Q12774 1597 aa28.16■■■□□ 2.1
TSSC4-210ENST00000496468 ZNF518AQ6AHZ1 1483 aa28.15■■■□□ 2.1
TSSC4-210ENST00000496468 COL17A1Q9UMD9 1497 aaPredicted RBP28.14■■■□□ 2.09
TSSC4-210ENST00000496468 CCDC141Q6ZP82 1450 aa28.13■■■□□ 2.09
TSSC4-210ENST00000496468 MBD5Q9P267 1494 aa28.13■■■□□ 2.09
TSSC4-210ENST00000496468 KDM5CP41229 1560 aa28.12■■■□□ 2.09
TSSC4-210ENST00000496468 CROCC2H7BZ55 1655 aa28.12■■■□□ 2.09
TSSC4-210ENST00000496468 DNMT1P26358 1616 aaKnown RBP28.11■■■□□ 2.09
TSSC4-210ENST00000496468 TRAPPC8Q9Y2L5 1435 aa28.1■■■□□ 2.09
TSSC4-210ENST00000496468 ZMYM4Q5VZL5 1548 aa28.1■■■□□ 2.09
TSSC4-210ENST00000496468 FAM50AQ14320 339 aaKnown RBP28.09■■■□□ 2.09
TSSC4-210ENST00000496468 HNRNPMP52272 730 aaKnown RBP eCLIP28.08■■■□□ 2.09
TSSC4-210ENST00000496468 HECW2Q9P2P5 1572 aa28.07■■■□□ 2.08
TSSC4-210ENST00000496468 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.07■■■□□ 2.08
TSSC4-210ENST00000496468 RAPGEF3O95398 923 aa28.05■■■□□ 2.08
TSSC4-210ENST00000496468 INO80Q9ULG1 1556 aaPredicted RBP28.04■■■□□ 2.08
TSSC4-210ENST00000496468 DAPK1P53355 1430 aa28.04■■■□□ 2.08
TSSC4-210ENST00000496468 SHANK2Q9UPX8 1470 aa28.03■■■□□ 2.08
TSSC4-210ENST00000496468 ZFYVE16Q7Z3T8 1539 aa28.02■■■□□ 2.08
TSSC4-210ENST00000496468 MAST1Q9Y2H9 1570 aa28.01■■■□□ 2.07
TSSC4-210ENST00000496468 ARHGEF40Q8TER5 1519 aa28■■■□□ 2.07
TSSC4-210ENST00000496468 ABCC5O15440 1437 aa28■■■□□ 2.07
TSSC4-210ENST00000496468 ATP7AQ04656 1500 aa27.99■■■□□ 2.07
TSSC4-210ENST00000496468 RSPH4AQ5TD94 716 aa27.99■■■□□ 2.07
TSSC4-210ENST00000496468 AFAP1Q8N556 730 aa27.99■■■□□ 2.07
TSSC4-210ENST00000496468 MAGI2Q86UL8 1455 aa27.97■■■□□ 2.07
TSSC4-210ENST00000496468 MLH3Q9UHC1 1453 aa27.97■■■□□ 2.07
TSSC4-210ENST00000496468 C9orf84Q5VXU9 1444 aa27.97■■■□□ 2.07
TSSC4-210ENST00000496468 ADGBQ8N7X0 1667 aa27.97■■■□□ 2.07
TSSC4-210ENST00000496468 KIDINS220Q9ULH0 1771 aa27.96■■■□□ 2.07
TSSC4-210ENST00000496468 SPAG9O60271 1321 aaKnown RBP27.95■■■□□ 2.07
TSSC4-210ENST00000496468 ABCA6Q8N139 1617 aa27.94■■■□□ 2.06
TSSC4-210ENST00000496468 PLXNC1O60486 1568 aa27.92■■■□□ 2.06
TSSC4-210ENST00000496468 RTEL1-TNFRSF6BF6WH68 1400 aa27.92■■■□□ 2.06
TSSC4-210ENST00000496468 DIP2CQ9Y2E4 1556 aa27.91■■■□□ 2.06
TSSC4-210ENST00000496468 TSPY4P0CV99 314 aa27.91■■■□□ 2.06
TSSC4-210ENST00000496468 TSPY10P0CW01 314 aa27.91■■■□□ 2.06
TSSC4-210ENST00000496468 MYT1LQ9UL68 1186 aa27.9■■■□□ 2.06
TSSC4-210ENST00000496468 YEATS2Q9ULM3 1422 aa27.9■■■□□ 2.06
TSSC4-210ENST00000496468 ADGRL2O95490 1459 aa27.88■■■□□ 2.05
TSSC4-210ENST00000496468 PTPRKQ15262 1439 aa27.87■■■□□ 2.05
TSSC4-210ENST00000496468 ITGAEP38570 1179 aa27.87■■■□□ 2.05
TSSC4-210ENST00000496468 REREQ9P2R6 1566 aa27.82■■■□□ 2.04
TSSC4-210ENST00000496468 ANKRD30AQ9BXX3 1397 aa27.81■■■□□ 2.04
TSSC4-210ENST00000496468 CHIC2Q9UKJ5 165 aa27.8■■■□□ 2.04
TSSC4-210ENST00000496468 ATP10AO60312 1499 aa27.79■■■□□ 2.04
TSSC4-210ENST00000496468 ROCK1Q13464 1354 aa27.79■■■□□ 2.04
TSSC4-210ENST00000496468 KIF15Q9NS87 1388 aa27.78■■■□□ 2.04
TSSC4-210ENST00000496468 NCOA1Q15788 1441 aa27.77■■■□□ 2.04
TSSC4-210ENST00000496468 DUOX2Q9NRD8 1548 aa27.77■■■□□ 2.04
TSSC4-210ENST00000496468 A2MP01023 1474 aa27.76■■■□□ 2.04
TSSC4-210ENST00000496468 GCC2Q8IWJ2 1684 aa27.75■■■□□ 2.03
TSSC4-210ENST00000496468 SIGLEC1Q9BZZ2 1709 aa27.73■■■□□ 2.03
TSSC4-210ENST00000496468 EIF2AK4Q9P2K8 1649 aaKnown RBP27.71■■■□□ 2.03
TSSC4-210ENST00000496468 TRIM26Q12899 539 aaPredicted RBP27.7■■■□□ 2.02
TSSC4-210ENST00000496468 RRP7BPQ9NSQ0 103 aa27.7■■■□□ 2.02
TSSC4-210ENST00000496468 ERBINQ96RT1 1412 aa27.69■■■□□ 2.02
TSSC4-210ENST00000496468 DHX29Q7Z478 1369 aaKnown RBP27.68■■■□□ 2.02
TSSC4-210ENST00000496468 HFM1A2PYH4 1435 aa27.67■■■□□ 2.02
TSSC4-210ENST00000496468 AGLP35573 1532 aa27.67■■■□□ 2.02
TSSC4-210ENST00000496468 BCORL1Q5H9F3 1711 aa27.67■■■□□ 2.02
TSSC4-210ENST00000496468 NAIPQ13075 1403 aa27.64■■■□□ 2.02
TSSC4-210ENST00000496468 ANKRD50Q9ULJ7 1429 aa27.64■■■□□ 2.02
TSSC4-210ENST00000496468 RNF17Q9BXT8 1623 aaKnown RBP27.61■■■□□ 2.01
TSSC4-210ENST00000496468 ARID4BQ4LE39 1312 aaPredicted RBP27.59■■■□□ 2.01
TSSC4-210ENST00000496468 DEPDC5O75140 1603 aa27.57■■■□□ 2
TSSC4-210ENST00000496468 PRDM15P57071 1507 aaPredicted RBP27.54■■■□□ 2
TSSC4-210ENST00000496468 UNC13BO14795 1591 aa27.53■■■□□ 2
TSSC4-210ENST00000496468 MROH1Q8NDA8 1641 aa27.52■■■□□ 2
TSSC4-210ENST00000496468 KIF3BO15066 747 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms