RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 CDK11AQ9UQ88 783 aaPredicted RBP23.27■■□□□ 1.32
GAPDH-210ENST00000496049 ATP10BO94823 1461 aa23.26■■□□□ 1.31
GAPDH-210ENST00000496049 ARID3CA6NKF2 412 aa23.26■■□□□ 1.31
GAPDH-210ENST00000496049 LRRC9Q6ZRR7 1453 aa23.25■■□□□ 1.31
GAPDH-210ENST00000496049 MTUS2Q5JR59 1369 aa23.25■■□□□ 1.31
GAPDH-210ENST00000496049 FRMPD1Q5SYB0 1578 aa23.24■■□□□ 1.31
GAPDH-210ENST00000496049 SUPT6HQ7KZ85 1726 aaKnown RBP23.19■■□□□ 1.3
GAPDH-210ENST00000496049 ARHGEF40Q8TER5 1519 aa23.18■■□□□ 1.3
GAPDH-210ENST00000496049 TROQ12816 1431 aaPredicted RBP23.17■■□□□ 1.3
GAPDH-210ENST00000496049 KIF14Q15058 1648 aa23.16■■□□□ 1.3
GAPDH-210ENST00000496049 PLEKHD1A6NEE1 506 aa23.15■■□□□ 1.3
GAPDH-210ENST00000496049 KANK4Q5T7N3 995 aaPredicted RBP23.14■■□□□ 1.29
GAPDH-210ENST00000496049 ABCA9Q8IUA7 1624 aa23.14■■□□□ 1.29
GAPDH-210ENST00000496049 FER1L4A9Z1Z3 1794 aa23.14■■□□□ 1.29
GAPDH-210ENST00000496049 PHLDB1Q86UU1 1377 aa23.13■■□□□ 1.29
GAPDH-210ENST00000496049 STRCQ7RTU9 1775 aa23.12■■□□□ 1.29
GAPDH-210ENST00000496049 PPARGC1BQ86YN6 1023 aaKnown RBP23.12■■□□□ 1.29
GAPDH-210ENST00000496049 SIGLEC1Q9BZZ2 1709 aa23.11■■□□□ 1.29
GAPDH-210ENST00000496049 PREX1Q8TCU6 1659 aa23.1■■□□□ 1.29
GAPDH-210ENST00000496049 NEO1Q92859 1461 aa23.09■■□□□ 1.29
GAPDH-210ENST00000496049 NCOA2Q15596 1464 aa23.07■■□□□ 1.28
GAPDH-210ENST00000496049 TTC37Q6PGP7 1564 aa23.06■■□□□ 1.28
GAPDH-210ENST00000496049 FANCAO15360 1455 aa23.05■■□□□ 1.28
GAPDH-210ENST00000496049 POGZQ7Z3K3 1410 aa23.05■■□□□ 1.28
GAPDH-210ENST00000496049 YEATS2Q9ULM3 1422 aa23.05■■□□□ 1.28
GAPDH-210ENST00000496049 RICTORQ6R327 1708 aa23.05■■□□□ 1.28
GAPDH-210ENST00000496049 ITSN2Q9NZM3 1697 aa23.03■■□□□ 1.28
GAPDH-210ENST00000496049 MLECQ14165 292 aa23.03■■□□□ 1.28
GAPDH-210ENST00000496049 DMRT2Q9Y5R5 561 aa23■■□□□ 1.27
GAPDH-210ENST00000496049 CCNB3Q8WWL7 1395 aa22.98■■□□□ 1.27
GAPDH-210ENST00000496049 AKNAQ7Z591 1439 aa22.97■■□□□ 1.27
GAPDH-210ENST00000496049 MYO5CQ9NQX4 1742 aa22.96■■□□□ 1.27
GAPDH-210ENST00000496049 MYOM3Q5VTT5 1437 aa22.96■■□□□ 1.27
GAPDH-210ENST00000496049 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.96■■□□□ 1.271e-323■■■□□ 18.8
GAPDH-210ENST00000496049 DENND4BO75064 1496 aaPredicted RBP22.95■■□□□ 1.26
GAPDH-210ENST00000496049 LTBP4Q8N2S1 1624 aa22.94■■□□□ 1.26
GAPDH-210ENST00000496049 ZFYVE16Q7Z3T8 1539 aa22.94■■□□□ 1.26
GAPDH-210ENST00000496049 CDC42BPAQ5VT25 1732 aa22.94■■□□□ 1.26
GAPDH-210ENST00000496049 PREX2Q70Z35 1606 aa22.93■■□□□ 1.26
GAPDH-210ENST00000496049 CEBPAP49715 358 aaPredicted RBP22.9■■□□□ 1.26
GAPDH-210ENST00000496049 FGD6Q6ZV73 1430 aa22.9■■□□□ 1.26
GAPDH-210ENST00000496049 IQSEC2Q5JU85 1478 aa22.89■■□□□ 1.25
GAPDH-210ENST00000496049 MIA2Q96PC5 1412 aa22.89■■□□□ 1.25
GAPDH-210ENST00000496049 RRBP1Q9P2E9 1410 aaKnown RBP22.89■■□□□ 1.25
GAPDH-210ENST00000496049 ZMYM4Q5VZL5 1548 aa22.88■■□□□ 1.25
GAPDH-210ENST00000496049 GPATCH8Q9UKJ3 1502 aaKnown RBP22.88■■□□□ 1.25
GAPDH-210ENST00000496049 PTPRTO14522 1441 aa22.87■■□□□ 1.25
GAPDH-210ENST00000496049 PTPN23Q9H3S7 1636 aa22.86■■□□□ 1.25
GAPDH-210ENST00000496049 UHRF1BP1Q6BDS2 1440 aa22.86■■□□□ 1.25
GAPDH-210ENST00000496049 ARHGAP5Q13017 1502 aa22.86■■□□□ 1.25
GAPDH-210ENST00000496049 ARHGEF12Q9NZN5 1544 aa22.86■■□□□ 1.25
GAPDH-210ENST00000496049 TRIM26Q12899 539 aaPredicted RBP22.85■■□□□ 1.25
GAPDH-210ENST00000496049 CDC42BPBQ9Y5S2 1711 aa22.84■■□□□ 1.25
GAPDH-210ENST00000496049 SETD1BQ9UPS6 1966 aaKnown RBP22.83■■□□□ 1.25
GAPDH-210ENST00000496049 MED1Q15648 1581 aaPredicted RBP22.83■■□□□ 1.25
GAPDH-210ENST00000496049 CFAP74Q9C0B2 1584 aa22.83■■□□□ 1.25
GAPDH-210ENST00000496049 CFDP1Q9UEE9 299 aaPredicted RBP22.82■■□□□ 1.24
GAPDH-210ENST00000496049 PLCH2O75038 1416 aa22.81■■□□□ 1.24
GAPDH-210ENST00000496049 TCOF1Q13428 1488 aaKnown RBP22.8■■□□□ 1.24
GAPDH-210ENST00000496049 CAMSAP2Q08AD1 1489 aa22.79■■□□□ 1.24
GAPDH-210ENST00000496049 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.78■■□□□ 1.24
GAPDH-210ENST00000496049 UBAP1LF5GYI3 381 aa22.78■■□□□ 1.24
GAPDH-210ENST00000496049 FAM50AQ14320 339 aaKnown RBP22.76■■□□□ 1.23
GAPDH-210ENST00000496049 PLEKHH2Q8IVE3 1493 aa22.76■■□□□ 1.23
GAPDH-210ENST00000496049 MAGI2Q86UL8 1455 aa22.74■■□□□ 1.23
GAPDH-210ENST00000496049 SAMD9LQ8IVG5 1584 aa22.74■■□□□ 1.23
GAPDH-210ENST00000496049 EFCAB2Q5VUJ9 269 aa22.73■■□□□ 1.23
GAPDH-210ENST00000496049 ZNF777Q9ULD5 760 aaPredicted RBP22.72■■□□□ 1.23
GAPDH-210ENST00000496049 ABCC1P33527 1531 aa22.7■■□□□ 1.22
GAPDH-210ENST00000496049 C3P01024 1663 aa22.7■■□□□ 1.22
GAPDH-210ENST00000496049 DNMT1P26358 1616 aaKnown RBP22.69■■□□□ 1.22
GAPDH-210ENST00000496049 C9orf84Q5VXU9 1444 aa22.69■■□□□ 1.22
GAPDH-210ENST00000496049 SYCP2Q9BX26 1530 aa22.67■■□□□ 1.22
GAPDH-210ENST00000496049 ATP10AO60312 1499 aa22.67■■□□□ 1.22
GAPDH-210ENST00000496049 CROCC2H7BZ55 1655 aa22.67■■□□□ 1.22
GAPDH-210ENST00000496049 ARHGEF5Q12774 1597 aa22.67■■□□□ 1.22
GAPDH-210ENST00000496049 NCOA1Q15788 1441 aa22.66■■□□□ 1.22
GAPDH-210ENST00000496049 KIAA1107Q9UPP5 1409 aa22.65■■□□□ 1.22
GAPDH-210ENST00000496049 ZNF335Q9H4Z2 1342 aaPredicted RBP22.64■■□□□ 1.22
GAPDH-210ENST00000496049 ZNF644Q9H582 1327 aaPredicted RBP22.63■■□□□ 1.21
GAPDH-210ENST00000496049 CCDC141Q6ZP82 1450 aa22.62■■□□□ 1.21
GAPDH-210ENST00000496049 PHF23Q9BUL5 403 aaPredicted RBP22.62■■□□□ 1.21
GAPDH-210ENST00000496049 PCGF6Q9BYE7 350 aa22.62■■□□□ 1.21
GAPDH-210ENST00000496049 DAPK1P53355 1430 aa22.62■■□□□ 1.21
GAPDH-210ENST00000496049 SCAF1Q9H7N4 1312 aaKnown RBP22.61■■□□□ 1.21
GAPDH-210ENST00000496049 HSPA1LP34931 641 aa22.61■■□□□ 1.21
GAPDH-210ENST00000496049 SCAPERQ9BY12 1400 aa22.61■■□□□ 1.21
GAPDH-210ENST00000496049 SHANK2Q9UPX8 1470 aa22.6■■□□□ 1.21
GAPDH-210ENST00000496049 ADGBQ8N7X0 1667 aa22.59■■□□□ 1.21
GAPDH-210ENST00000496049 ITGAEP38570 1179 aa22.59■■□□□ 1.21
GAPDH-210ENST00000496049 RSPH4AQ5TD94 716 aa22.59■■□□□ 1.21
GAPDH-210ENST00000496049 CAMSAP1Q5T5Y3 1602 aa22.59■■□□□ 1.21
GAPDH-210ENST00000496049 MBD5Q9P267 1494 aa22.57■■□□□ 1.2
GAPDH-210ENST00000496049 ABCC5O15440 1437 aa22.57■■□□□ 1.2
GAPDH-210ENST00000496049 PIP4K2BP78356 416 aa22.54■■□□□ 1.2
GAPDH-210ENST00000496049 MAST1Q9Y2H9 1570 aa22.54■■□□□ 1.2
GAPDH-210ENST00000496049 ZNF518AQ6AHZ1 1483 aa22.54■■□□□ 1.2
GAPDH-210ENST00000496049 HNRNPMP52272 730 aaKnown RBP eCLIP22.53■■□□□ 1.2
GAPDH-210ENST00000496049 TRAPPC8Q9Y2L5 1435 aa22.52■■□□□ 1.2
GAPDH-210ENST00000496049 NCKAP5LQ9HCH0 1330 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms