RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 UGGT2Q9NYU1 1516 aa13.24□□□□□ -0.29
GAPVD1-219ENST00000495955 FOXD1Q16676 465 aa13.23□□□□□ -0.29
GAPVD1-219ENST00000495955 CD109Q6YHK3 1445 aa13.23□□□□□ -0.29
GAPVD1-219ENST00000495955 C14orf37Q86TY3 774 aa13.23□□□□□ -0.29
GAPVD1-219ENST00000495955 KIAA0556O60303 1618 aa13.23□□□□□ -0.29
GAPVD1-219ENST00000495955 RAPGEF3O95398 923 aa13.22□□□□□ -0.29
GAPVD1-219ENST00000495955 TIAM1Q13009 1591 aa13.21□□□□□ -0.3
GAPVD1-219ENST00000495955 RAB3GAP2Q9H2M9 1393 aa13.21□□□□□ -0.3
GAPVD1-219ENST00000495955 ARHGEF11O15085 1522 aa13.2□□□□□ -0.3
GAPVD1-219ENST00000495955 SIN3AQ96ST3 1273 aa13.2□□□□□ -0.3
GAPVD1-219ENST00000495955 CHD1O14646 1710 aa13.2□□□□□ -0.3
GAPVD1-219ENST00000495955 MPHOSPH9Q99550 1183 aa13.19□□□□□ -0.3
GAPVD1-219ENST00000495955 HDGFP51858 240 aaKnown RBP13.19□□□□□ -0.3
GAPVD1-219ENST00000495955 YTHDC1Q96MU7 727 aaKnown RBP13.19□□□□□ -0.3
GAPVD1-219ENST00000495955 RAPGEF6Q8TEU7 1601 aa13.19□□□□□ -0.3
GAPVD1-219ENST00000495955 ASXL2Q76L83 1435 aa13.18□□□□□ -0.3
GAPVD1-219ENST00000495955 SCAPERQ9BY12 1400 aa13.18□□□□□ -0.3
GAPVD1-219ENST00000495955 KIF14Q15058 1648 aa13.16□□□□□ -0.3
GAPVD1-219ENST00000495955 KIF15Q9NS87 1388 aa13.16□□□□□ -0.3
GAPVD1-219ENST00000495955 ATP10BO94823 1461 aa13.16□□□□□ -0.3
GAPVD1-219ENST00000495955 DISP1Q96F81 1524 aa13.16□□□□□ -0.3
GAPVD1-219ENST00000495955 PLEKHH2Q8IVE3 1493 aa13.16□□□□□ -0.3
GAPVD1-219ENST00000495955 SUPT6HQ7KZ85 1726 aaKnown RBP13.15□□□□□ -0.3
GAPVD1-219ENST00000495955 DCAF11Q8TEB1 546 aa13.15□□□□□ -0.3
GAPVD1-219ENST00000495955 AEBP2Q6ZN18 517 aaPredicted RBP13.14□□□□□ -0.31
GAPVD1-219ENST00000495955 NUP153P49790 1475 aaKnown RBP13.13□□□□□ -0.31
GAPVD1-219ENST00000495955 MIA2Q96PC5 1412 aa13.12□□□□□ -0.31
GAPVD1-219ENST00000495955 WDR7Q9Y4E6 1490 aa13.11□□□□□ -0.31
GAPVD1-219ENST00000495955 ZNF316A6NFI3 1004 aaPredicted RBP13.11□□□□□ -0.31
GAPVD1-219ENST00000495955 ABCC2Q92887 1545 aa13.11□□□□□ -0.31
GAPVD1-219ENST00000495955 ADGRL1O94910 1474 aa13.1□□□□□ -0.31
GAPVD1-219ENST00000495955 NUTM2DQ5VT03 806 aaPredicted RBP13.1□□□□□ -0.31
GAPVD1-219ENST00000495955 DIEXFQ68CQ4 756 aaKnown RBP13.1□□□□□ -0.31
GAPVD1-219ENST00000495955 POGKQ9P215 609 aa13.09□□□□□ -0.31
GAPVD1-219ENST00000495955 HIRIP3Q9BW71 556 aaPredicted RBP13.09□□□□□ -0.31
GAPVD1-219ENST00000495955 CARD11Q9BXL7 1154 aa13.09□□□□□ -0.31
GAPVD1-219ENST00000495955 C9orf84Q5VXU9 1444 aa13.09□□□□□ -0.31
GAPVD1-219ENST00000495955 EID1Q9Y6B2 187 aa13.09□□□□□ -0.31
GAPVD1-219ENST00000495955 FANCAO15360 1455 aa13.08□□□□□ -0.32
GAPVD1-219ENST00000495955 SCAF1Q9H7N4 1312 aaKnown RBP13.08□□□□□ -0.32
GAPVD1-219ENST00000495955 ANKRD50Q9ULJ7 1429 aa13.08□□□□□ -0.32
GAPVD1-219ENST00000495955 ANP32CO43423 234 aa13.07□□□□□ -0.32
GAPVD1-219ENST00000495955 EIF4G2P78344 907 aaKnown RBP eCLIP13.07□□□□□ -0.32
GAPVD1-219ENST00000495955 PLEKHG5O94827 1062 aa13.06□□□□□ -0.32
GAPVD1-219ENST00000495955 DNAJC5Q9H3Z4 198 aa13.05□□□□□ -0.32
GAPVD1-219ENST00000495955 STK26Q9P289 416 aa13.04□□□□□ -0.32
GAPVD1-219ENST00000495955 CAMSAP2Q08AD1 1489 aa13.04□□□□□ -0.32
GAPVD1-219ENST00000495955 TMC1Q8TDI8 760 aa13.04□□□□□ -0.32
GAPVD1-219ENST00000495955 TEX14Q8IWB6 1497 aa13.04□□□□□ -0.32
GAPVD1-219ENST00000495955 AKNAQ7Z591 1439 aa13.04□□□□□ -0.32
GAPVD1-219ENST00000495955 DAPK1P53355 1430 aa13.04□□□□□ -0.32
GAPVD1-219ENST00000495955 DENND4BO75064 1496 aaPredicted RBP13.04□□□□□ -0.32
GAPVD1-219ENST00000495955 CENPBP07199 599 aaPredicted RBP13.03□□□□□ -0.32
GAPVD1-219ENST00000495955 MAP3K1Q13233 1512 aa13.03□□□□□ -0.32
GAPVD1-219ENST00000495955 RRBP1Q9P2E9 1410 aaKnown RBP13.03□□□□□ -0.32
GAPVD1-219ENST00000495955 CLSPNQ9HAW4 1339 aa13.03□□□□□ -0.32
GAPVD1-219ENST00000495955 SAFB2Q14151 953 aaKnown RBP eCLIP13.02□□□□□ -0.33
GAPVD1-219ENST00000495955 CCDC141Q6ZP82 1450 aa13.02□□□□□ -0.33
GAPVD1-219ENST00000495955 POGZQ7Z3K3 1410 aa13.02□□□□□ -0.33
GAPVD1-219ENST00000495955 CCDC144AA2RUR9 1427 aa13.01□□□□□ -0.33
GAPVD1-219ENST00000495955 PLCH2O75038 1416 aa13.01□□□□□ -0.33
GAPVD1-219ENST00000495955 SAMD9Q5K651 1589 aa13.01□□□□□ -0.33
GAPVD1-219ENST00000495955 GPATCH8Q9UKJ3 1502 aaKnown RBP12.99□□□□□ -0.33
GAPVD1-219ENST00000495955 DDX10Q13206 875 aaKnown RBP12.99□□□□□ -0.33
GAPVD1-219ENST00000495955 ERCC6L2Q5T890 1561 aa12.99□□□□□ -0.33
GAPVD1-219ENST00000495955 PTPN23Q9H3S7 1636 aa12.98□□□□□ -0.33
GAPVD1-219ENST00000495955 ZBTB7CA1YPR0 619 aa12.97□□□□□ -0.33
GAPVD1-219ENST00000495955 NEFMP07197 916 aa12.96□□□□□ -0.34
GAPVD1-219ENST00000495955 CDCA8Q53HL2 280 aa12.96□□□□□ -0.34
GAPVD1-219ENST00000495955 HAP1P54257 671 aaPredicted RBP12.95□□□□□ -0.34
GAPVD1-219ENST00000495955 LMOD2Q6P5Q4 547 aa12.95□□□□□ -0.34
GAPVD1-219ENST00000495955 SLC24A1O60721 1099 aa12.95□□□□□ -0.34
GAPVD1-219ENST00000495955 ABCC5O15440 1437 aa12.94□□□□□ -0.34
GAPVD1-219ENST00000495955 L3MBTL2Q969R5 705 aa12.94□□□□□ -0.34
GAPVD1-219ENST00000495955 TIMELESSQ9UNS1 1208 aa12.94□□□□□ -0.34
GAPVD1-219ENST00000495955 ROCK2O75116 1388 aaKnown RBP12.93□□□□□ -0.34
GAPVD1-219ENST00000495955 VGFO15240 615 aaPredicted RBP12.93□□□□□ -0.34
GAPVD1-219ENST00000495955 SRPK2P78362 688 aaKnown RBP12.93□□□□□ -0.34
GAPVD1-219ENST00000495955 UHRF1BP1LA0JNW5 1464 aa12.93□□□□□ -0.34
GAPVD1-219ENST00000495955 DHX57Q6P158 1386 aaKnown RBP12.91□□□□□ -0.34
GAPVD1-219ENST00000495955 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.91□□□□□ -0.34
GAPVD1-219ENST00000495955 ABCA8O94911 1581 aa12.91□□□□□ -0.34
GAPVD1-219ENST00000495955 CLASP1Q7Z460 1538 aa12.9□□□□□ -0.34
GAPVD1-219ENST00000495955 SYCP2Q9BX26 1530 aa12.9□□□□□ -0.34
GAPVD1-219ENST00000495955 ITSN2Q9NZM3 1697 aa12.9□□□□□ -0.34
GAPVD1-219ENST00000495955 ZNF518AQ6AHZ1 1483 aa12.89□□□□□ -0.35
GAPVD1-219ENST00000495955 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.89□□□□□ -0.35
GAPVD1-219ENST00000495955 TMF1P82094 1093 aa12.89□□□□□ -0.35
GAPVD1-219ENST00000495955 ROCK1Q13464 1354 aa12.89□□□□□ -0.35
GAPVD1-219ENST00000495955 NEFLP07196 543 aa12.89□□□□□ -0.35
GAPVD1-219ENST00000495955 HFM1A2PYH4 1435 aa12.89□□□□□ -0.35
GAPVD1-219ENST00000495955 TRAPPC8Q9Y2L5 1435 aa12.88□□□□□ -0.35
GAPVD1-219ENST00000495955 KDM5BQ9UGL1 1544 aa12.88□□□□□ -0.35
GAPVD1-219ENST00000495955 CFAP43Q8NDM7 1665 aa12.87□□□□□ -0.35
GAPVD1-219ENST00000495955 TRAK1Q9UPV9 953 aa12.87□□□□□ -0.35
GAPVD1-219ENST00000495955 CEBPAP49715 358 aaPredicted RBP12.86□□□□□ -0.35
GAPVD1-219ENST00000495955 KNSTRNQ9Y448 316 aa12.86□□□□□ -0.35
GAPVD1-219ENST00000495955 DHX29Q7Z478 1369 aaKnown RBP12.85□□□□□ -0.35
GAPVD1-219ENST00000495955 TXNDC2Q86VQ3 553 aa12.85□□□□□ -0.35
GAPVD1-219ENST00000495955 THEMISQ8N1K5 641 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms