RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 CCNB3Q8WWL7 1395 aa21.25■□□□□ 0.99
COL1A1-208ENST00000494334 ARHGAP5Q13017 1502 aa21.25■□□□□ 0.99
COL1A1-208ENST00000494334 CFAP74Q9C0B2 1584 aa21.23■□□□□ 0.99
COL1A1-208ENST00000494334 NCOA2Q15596 1464 aa21.22■□□□□ 0.99
COL1A1-208ENST00000494334 PREX2Q70Z35 1606 aa21.22■□□□□ 0.99
COL1A1-208ENST00000494334 SCAPERQ9BY12 1400 aa21.21■□□□□ 0.99
COL1A1-208ENST00000494334 CDC42BPBQ9Y5S2 1711 aa21.21■□□□□ 0.99
COL1A1-208ENST00000494334 DENND4BO75064 1496 aaPredicted RBP21.21■□□□□ 0.99
COL1A1-208ENST00000494334 ADGRL1O94910 1474 aa21.21■□□□□ 0.99
COL1A1-208ENST00000494334 CFDP1Q9UEE9 299 aaPredicted RBP21.21■□□□□ 0.99
COL1A1-208ENST00000494334 CDC42BPAQ5VT25 1732 aa21.2■□□□□ 0.98
COL1A1-208ENST00000494334 ZNF777Q9ULD5 760 aaPredicted RBP21.19■□□□□ 0.98
COL1A1-208ENST00000494334 SUPT6HQ7KZ85 1726 aaKnown RBP21.18■□□□□ 0.98
COL1A1-208ENST00000494334 FRMPD1Q5SYB0 1578 aa21.14■□□□□ 0.98
COL1A1-208ENST00000494334 POGZQ7Z3K3 1410 aa21.13■□□□□ 0.97
COL1A1-208ENST00000494334 ARHGEF12Q9NZN5 1544 aa21.13■□□□□ 0.97
COL1A1-208ENST00000494334 AFAP1Q8N556 730 aa21.12■□□□□ 0.97
COL1A1-208ENST00000494334 ZNF644Q9H582 1327 aaPredicted RBP21.11■□□□□ 0.97
COL1A1-208ENST00000494334 SAMD9LQ8IVG5 1584 aa21.1■□□□□ 0.97
COL1A1-208ENST00000494334 ABCC1P33527 1531 aa21.1■□□□□ 0.97
COL1A1-208ENST00000494334 RICTORQ6R327 1708 aa21.1■□□□□ 0.97
COL1A1-208ENST00000494334 HNRNPMP52272 730 aaKnown RBP eCLIP21.1■□□□□ 0.97
COL1A1-208ENST00000494334 TRAPPC8Q9Y2L5 1435 aa21.09■□□□□ 0.97
COL1A1-208ENST00000494334 ITSN2Q9NZM3 1697 aa21.09■□□□□ 0.97
COL1A1-208ENST00000494334 KIAA1107Q9UPP5 1409 aa21.08■□□□□ 0.97
COL1A1-208ENST00000494334 ZNF518AQ6AHZ1 1483 aa21.07■□□□□ 0.96
COL1A1-208ENST00000494334 PLEKHH2Q8IVE3 1493 aa21.07■□□□□ 0.96
COL1A1-208ENST00000494334 MYOM3Q5VTT5 1437 aa21.06■□□□□ 0.96
COL1A1-208ENST00000494334 ZMYM4Q5VZL5 1548 aa21.05■□□□□ 0.96
COL1A1-208ENST00000494334 SYCP2Q9BX26 1530 aa21.04■□□□□ 0.96
COL1A1-208ENST00000494334 MAGI2Q86UL8 1455 aa21.04■□□□□ 0.96
COL1A1-208ENST00000494334 MIA2Q96PC5 1412 aa21.03■□□□□ 0.96
COL1A1-208ENST00000494334 YEATS2Q9ULM3 1422 aa21.03■□□□□ 0.96
COL1A1-208ENST00000494334 KDM5CP41229 1560 aa21.02■□□□□ 0.96
COL1A1-208ENST00000494334 PPARGC1BQ86YN6 1023 aaKnown RBP21.02■□□□□ 0.96
COL1A1-208ENST00000494334 MBD5Q9P267 1494 aa21.01■□□□□ 0.95
COL1A1-208ENST00000494334 MYT1LQ9UL68 1186 aa21.01■□□□□ 0.95
COL1A1-208ENST00000494334 CAMSAP2Q08AD1 1489 aa21.01■□□□□ 0.95
COL1A1-208ENST00000494334 ZFYVE16Q7Z3T8 1539 aa20.99■□□□□ 0.95
COL1A1-208ENST00000494334 MLH3Q9UHC1 1453 aa20.99■□□□□ 0.95
COL1A1-208ENST00000494334 RSPH4AQ5TD94 716 aa20.97■□□□□ 0.95
COL1A1-208ENST00000494334 ARHGEF40Q8TER5 1519 aa20.97■□□□□ 0.95
COL1A1-208ENST00000494334 SPAG9O60271 1321 aaKnown RBP20.97■□□□□ 0.95
COL1A1-208ENST00000494334 FGD6Q6ZV73 1430 aa20.95■□□□□ 0.94
COL1A1-208ENST00000494334 ATP10AO60312 1499 aa20.94■□□□□ 0.94
COL1A1-208ENST00000494334 HECW2Q9P2P5 1572 aa20.94■□□□□ 0.94
COL1A1-208ENST00000494334 KDM4FA0A1W2PPD8 638 aa20.94■□□□□ 0.94
COL1A1-208ENST00000494334 ARID4BQ4LE39 1312 aaPredicted RBP20.92■□□□□ 0.94
COL1A1-208ENST00000494334 CCDC141Q6ZP82 1450 aa20.92■□□□□ 0.94
COL1A1-208ENST00000494334 C9orf84Q5VXU9 1444 aa20.9■□□□□ 0.94
COL1A1-208ENST00000494334 KIDINS220Q9ULH0 1771 aa20.9■□□□□ 0.94
COL1A1-208ENST00000494334 PTPN23Q9H3S7 1636 aa20.89■□□□□ 0.94
COL1A1-208ENST00000494334 ARHGEF5Q12774 1597 aa20.89■□□□□ 0.94
COL1A1-208ENST00000494334 TCOF1Q13428 1488 aaKnown RBP20.89■□□□□ 0.94
COL1A1-208ENST00000494334 TSPY4P0CV99 314 aa20.89■□□□□ 0.93
COL1A1-208ENST00000494334 TSPY10P0CW01 314 aa20.89■□□□□ 0.93
COL1A1-208ENST00000494334 DIP2CQ9Y2E4 1556 aa20.89■□□□□ 0.93
COL1A1-208ENST00000494334 RTEL1-TNFRSF6BF6WH68 1400 aa20.88■□□□□ 0.93
COL1A1-208ENST00000494334 ATP7AQ04656 1500 aa20.88■□□□□ 0.93
COL1A1-208ENST00000494334 ABCA6Q8N139 1617 aa20.87■□□□□ 0.93
COL1A1-208ENST00000494334 INO80Q9ULG1 1556 aaPredicted RBP20.86■□□□□ 0.93
COL1A1-208ENST00000494334 FAM50AQ14320 339 aaKnown RBP20.85■□□□□ 0.93
COL1A1-208ENST00000494334 SIGLEC1Q9BZZ2 1709 aa20.84■□□□□ 0.93
COL1A1-208ENST00000494334 ABCC5O15440 1437 aa20.83■□□□□ 0.93
COL1A1-208ENST00000494334 REREQ9P2R6 1566 aa20.82■□□□□ 0.92
COL1A1-208ENST00000494334 MLECQ14165 292 aa20.82■□□□□ 0.92
COL1A1-208ENST00000494334 DAPK1P53355 1430 aa20.8■□□□□ 0.92
COL1A1-208ENST00000494334 A2MP01023 1474 aa20.79■□□□□ 0.92
COL1A1-208ENST00000494334 MAST1Q9Y2H9 1570 aa20.78■□□□□ 0.92
COL1A1-208ENST00000494334 AEBP2Q6ZN18 517 aaPredicted RBP20.78■□□□□ 0.92
COL1A1-208ENST00000494334 BCORL1Q5H9F3 1711 aa20.78■□□□□ 0.92
COL1A1-208ENST00000494334 AGLP35573 1532 aa20.78■□□□□ 0.92
COL1A1-208ENST00000494334 DHX29Q7Z478 1369 aaKnown RBP20.77■□□□□ 0.92
COL1A1-208ENST00000494334 DNMT1P26358 1616 aaKnown RBP20.76■□□□□ 0.91
COL1A1-208ENST00000494334 SHANK2Q9UPX8 1470 aa20.75■□□□□ 0.91
COL1A1-208ENST00000494334 ADAMTSL3P82987 1691 aa20.75■□□□□ 0.91
COL1A1-208ENST00000494334 CHIC2Q9UKJ5 165 aa20.75■□□□□ 0.91
COL1A1-208ENST00000494334 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.74■□□□□ 0.91
COL1A1-208ENST00000494334 PLXNC1O60486 1568 aa20.73■□□□□ 0.91
COL1A1-208ENST00000494334 RRBP1Q9P2E9 1410 aaKnown RBP20.73■□□□□ 0.91
COL1A1-208ENST00000494334 ADGBQ8N7X0 1667 aa20.72■□□□□ 0.91
COL1A1-208ENST00000494334 RRP7BPQ9NSQ0 103 aa20.71■□□□□ 0.91
COL1A1-208ENST00000494334 CROCC2H7BZ55 1655 aa20.7■□□□□ 0.91
COL1A1-208ENST00000494334 PTPRKQ15262 1439 aa20.7■□□□□ 0.9
COL1A1-208ENST00000494334 MADDQ8WXG6 1647 aa20.69■□□□□ 0.9
COL1A1-208ENST00000494334 GGT6Q6P531 493 aa20.69■□□□□ 0.9
COL1A1-208ENST00000494334 KIF3BO15066 747 aa20.68■□□□□ 0.9
COL1A1-208ENST00000494334 ANKRD30AQ9BXX3 1397 aa20.68■□□□□ 0.9
COL1A1-208ENST00000494334 KIF15Q9NS87 1388 aa20.68■□□□□ 0.9
COL1A1-208ENST00000494334 NCOA1Q15788 1441 aa20.68■□□□□ 0.9
COL1A1-208ENST00000494334 ITGAEP38570 1179 aa20.67■□□□□ 0.9
COL1A1-208ENST00000494334 PTPRMP28827 1452 aa20.67■□□□□ 0.9
COL1A1-208ENST00000494334 ADGRL2O95490 1459 aa20.65■□□□□ 0.9
COL1A1-208ENST00000494334 DUOX2Q9NRD8 1548 aa20.64■□□□□ 0.9
COL1A1-208ENST00000494334 ESF1Q9H501 851 aaKnown RBP20.63■□□□□ 0.89
COL1A1-208ENST00000494334 PPP6R1Q9UPN7 881 aa20.63■□□□□ 0.89
COL1A1-208ENST00000494334 RIMS1Q86UR5 1692 aaKnown RBP20.62■□□□□ 0.89
COL1A1-208ENST00000494334 FER1L4A9Z1Z3 1794 aa20.6■□□□□ 0.89
COL1A1-208ENST00000494334 PLPPR3Q6T4P5 718 aa20.6■□□□□ 0.89
COL1A1-208ENST00000494334 ERBINQ96RT1 1412 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms