RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 CDC42BPAQ5VT25 1732 aa19.52■□□□□ 0.71
TRA2A-209ENST00000494255 AKNAQ7Z591 1439 aa19.51■□□□□ 0.71
TRA2A-209ENST00000494255 CDC42BPBQ9Y5S2 1711 aa19.51■□□□□ 0.71
TRA2A-209ENST00000494255 COL17A1Q9UMD9 1497 aaPredicted RBP19.5■□□□□ 0.71
TRA2A-209ENST00000494255 KANK4Q5T7N3 995 aaPredicted RBP19.5■□□□□ 0.71
TRA2A-209ENST00000494255 NCOA2Q15596 1464 aa19.49■□□□□ 0.71
TRA2A-209ENST00000494255 GPATCH8Q9UKJ3 1502 aaKnown RBP19.48■□□□□ 0.71
TRA2A-209ENST00000494255 ITSN2Q9NZM3 1697 aa19.47■□□□□ 0.71
TRA2A-209ENST00000494255 ADGRL1O94910 1474 aa19.46■□□□□ 0.71
TRA2A-209ENST00000494255 DENND4BO75064 1496 aaPredicted RBP19.45■□□□□ 0.7
TRA2A-209ENST00000494255 CFDP1Q9UEE9 299 aaPredicted RBP19.45■□□□□ 0.7
TRA2A-209ENST00000494255 SCAPERQ9BY12 1400 aa19.43■□□□□ 0.7
TRA2A-209ENST00000494255 ZNF777Q9ULD5 760 aaPredicted RBP19.43■□□□□ 0.7
TRA2A-209ENST00000494255 RAPGEF3O95398 923 aa19.42■□□□□ 0.7
TRA2A-209ENST00000494255 RICTORQ6R327 1708 aa19.39■□□□□ 0.7
TRA2A-209ENST00000494255 FRMPD1Q5SYB0 1578 aa19.39■□□□□ 0.69
TRA2A-209ENST00000494255 SAMD9LQ8IVG5 1584 aa19.39■□□□□ 0.69
TRA2A-209ENST00000494255 ABCC1P33527 1531 aa19.39■□□□□ 0.69
TRA2A-209ENST00000494255 PLEKHH2Q8IVE3 1493 aa19.38■□□□□ 0.69
TRA2A-209ENST00000494255 POGZQ7Z3K3 1410 aa19.38■□□□□ 0.69
TRA2A-209ENST00000494255 MYOM3Q5VTT5 1437 aa19.36■□□□□ 0.69
TRA2A-209ENST00000494255 ZNF518AQ6AHZ1 1483 aa19.35■□□□□ 0.69
TRA2A-209ENST00000494255 KIAA1107Q9UPP5 1409 aa19.34■□□□□ 0.69
TRA2A-209ENST00000494255 SYCP2Q9BX26 1530 aa19.33■□□□□ 0.69
TRA2A-209ENST00000494255 ZMYM4Q5VZL5 1548 aa19.33■□□□□ 0.68
TRA2A-209ENST00000494255 ARHGEF12Q9NZN5 1544 aa19.32■□□□□ 0.68
TRA2A-209ENST00000494255 ZNF644Q9H582 1327 aaPredicted RBP19.32■□□□□ 0.68
TRA2A-209ENST00000494255 MIA2Q96PC5 1412 aa19.32■□□□□ 0.68
TRA2A-209ENST00000494255 CAMSAP2Q08AD1 1489 aa19.31■□□□□ 0.68
TRA2A-209ENST00000494255 HNRNPMP52272 730 aaKnown RBP eCLIP19.31■□□□□ 0.68
TRA2A-209ENST00000494255 TRAPPC8Q9Y2L5 1435 aa19.31■□□□□ 0.68
TRA2A-209ENST00000494255 AFAP1Q8N556 730 aa19.3■□□□□ 0.68
TRA2A-209ENST00000494255 MAGI2Q86UL8 1455 aa19.3■□□□□ 0.68
TRA2A-209ENST00000494255 KDM5CP41229 1560 aa19.29■□□□□ 0.68
TRA2A-209ENST00000494255 MYT1LQ9UL68 1186 aa19.29■□□□□ 0.68
TRA2A-209ENST00000494255 PPARGC1BQ86YN6 1023 aaKnown RBP19.28■□□□□ 0.68
TRA2A-209ENST00000494255 ZFYVE16Q7Z3T8 1539 aa19.28■□□□□ 0.68
TRA2A-209ENST00000494255 ARHGEF40Q8TER5 1519 aa19.27■□□□□ 0.68
TRA2A-209ENST00000494255 HECW2Q9P2P5 1572 aa19.27■□□□□ 0.68
TRA2A-209ENST00000494255 FGD6Q6ZV73 1430 aa19.26■□□□□ 0.67
TRA2A-209ENST00000494255 PTPN23Q9H3S7 1636 aa19.24■□□□□ 0.67
TRA2A-209ENST00000494255 MBD5Q9P267 1494 aa19.24■□□□□ 0.67
TRA2A-209ENST00000494255 RSPH4AQ5TD94 716 aa19.24■□□□□ 0.67
TRA2A-209ENST00000494255 SPAG9O60271 1321 aaKnown RBP19.23■□□□□ 0.67
TRA2A-209ENST00000494255 YEATS2Q9ULM3 1422 aa19.23■□□□□ 0.67
TRA2A-209ENST00000494255 MLH3Q9UHC1 1453 aa19.23■□□□□ 0.67
TRA2A-209ENST00000494255 CCDC141Q6ZP82 1450 aa19.22■□□□□ 0.67
TRA2A-209ENST00000494255 ARHGEF5Q12774 1597 aa19.22■□□□□ 0.67
TRA2A-209ENST00000494255 ATP10AO60312 1499 aa19.19■□□□□ 0.66
TRA2A-209ENST00000494255 TCOF1Q13428 1488 aaKnown RBP19.19■□□□□ 0.66
TRA2A-209ENST00000494255 KIDINS220Q9ULH0 1771 aa19.19■□□□□ 0.66
TRA2A-209ENST00000494255 ATP7AQ04656 1500 aa19.19■□□□□ 0.66
TRA2A-209ENST00000494255 INO80Q9ULG1 1556 aaPredicted RBP19.18■□□□□ 0.66
TRA2A-209ENST00000494255 TSPY4P0CV99 314 aa19.17■□□□□ 0.66
TRA2A-209ENST00000494255 TSPY10P0CW01 314 aa19.17■□□□□ 0.66
TRA2A-209ENST00000494255 C9orf84Q5VXU9 1444 aa19.17■□□□□ 0.66
TRA2A-209ENST00000494255 ABCA6Q8N139 1617 aa19.17■□□□□ 0.66
TRA2A-209ENST00000494255 DIP2CQ9Y2E4 1556 aa19.17■□□□□ 0.66
TRA2A-209ENST00000494255 ARID4BQ4LE39 1312 aaPredicted RBP19.17■□□□□ 0.66
TRA2A-209ENST00000494255 FAM50AQ14320 339 aaKnown RBP19.16■□□□□ 0.66
TRA2A-209ENST00000494255 RTEL1-TNFRSF6BF6WH68 1400 aa19.15■□□□□ 0.66
TRA2A-209ENST00000494255 DNMT1P26358 1616 aaKnown RBP19.12■□□□□ 0.65
TRA2A-209ENST00000494255 REREQ9P2R6 1566 aa19.11■□□□□ 0.65
TRA2A-209ENST00000494255 MAST1Q9Y2H9 1570 aa19.11■□□□□ 0.65
TRA2A-209ENST00000494255 DAPK1P53355 1430 aa19.1■□□□□ 0.65
TRA2A-209ENST00000494255 CROCC2H7BZ55 1655 aa19.1■□□□□ 0.65
TRA2A-209ENST00000494255 ADGBQ8N7X0 1667 aa19.1■□□□□ 0.65
TRA2A-209ENST00000494255 ABCC5O15440 1437 aa19.1■□□□□ 0.65
TRA2A-209ENST00000494255 SHANK2Q9UPX8 1470 aa19.09■□□□□ 0.65
TRA2A-209ENST00000494255 SIGLEC1Q9BZZ2 1709 aa19.08■□□□□ 0.65
TRA2A-209ENST00000494255 A2MP01023 1474 aa19.07■□□□□ 0.64
TRA2A-209ENST00000494255 BCORL1Q5H9F3 1711 aa19.07■□□□□ 0.64
TRA2A-209ENST00000494255 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.06■□□□□ 0.641e-7■■□□□ 12.6
TRA2A-209ENST00000494255 AGLP35573 1532 aa19.05■□□□□ 0.64
TRA2A-209ENST00000494255 KDM4FA0A1W2PPD8 638 aa19.05■□□□□ 0.64
TRA2A-209ENST00000494255 RRBP1Q9P2E9 1410 aaKnown RBP19.05■□□□□ 0.64
TRA2A-209ENST00000494255 PLXNC1O60486 1568 aa19.04■□□□□ 0.64
TRA2A-209ENST00000494255 MLECQ14165 292 aa19.04■□□□□ 0.64
TRA2A-209ENST00000494255 ADAMTSL3P82987 1691 aa19.02■□□□□ 0.64
TRA2A-209ENST00000494255 DHX29Q7Z478 1369 aaKnown RBP19.02■□□□□ 0.64
TRA2A-209ENST00000494255 CHIC2Q9UKJ5 165 aa19.02■□□□□ 0.64
TRA2A-209ENST00000494255 ANKRD30AQ9BXX3 1397 aa19.02■□□□□ 0.63
TRA2A-209ENST00000494255 KIF15Q9NS87 1388 aa18.99■□□□□ 0.63
TRA2A-209ENST00000494255 ITGAEP38570 1179 aa18.98■□□□□ 0.63
TRA2A-209ENST00000494255 RRP7BPQ9NSQ0 103 aa18.98■□□□□ 0.63
TRA2A-209ENST00000494255 MADDQ8WXG6 1647 aa18.98■□□□□ 0.63
TRA2A-209ENST00000494255 DUOX2Q9NRD8 1548 aa18.98■□□□□ 0.63
TRA2A-209ENST00000494255 AEBP2Q6ZN18 517 aaPredicted RBP18.98■□□□□ 0.63
TRA2A-209ENST00000494255 ADGRL2O95490 1459 aa18.97■□□□□ 0.63
TRA2A-209ENST00000494255 FER1L4A9Z1Z3 1794 aa18.96■□□□□ 0.63
TRA2A-209ENST00000494255 NCOA1Q15788 1441 aa18.95■□□□□ 0.62
TRA2A-209ENST00000494255 KIF3BO15066 747 aa18.95■□□□□ 0.62
TRA2A-209ENST00000494255 PTPRKQ15262 1439 aa18.95■□□□□ 0.62
TRA2A-209ENST00000494255 RIMS1Q86UR5 1692 aaKnown RBP18.95■□□□□ 0.62
TRA2A-209ENST00000494255 ESF1Q9H501 851 aaKnown RBP18.95■□□□□ 0.62
TRA2A-209ENST00000494255 EIF2AK4Q9P2K8 1649 aaKnown RBP18.93■□□□□ 0.62
TRA2A-209ENST00000494255 GGT6Q6P531 493 aa18.93■□□□□ 0.62
TRA2A-209ENST00000494255 ERBINQ96RT1 1412 aa18.92■□□□□ 0.62
TRA2A-209ENST00000494255 ROCK1Q13464 1354 aa18.92■□□□□ 0.62
TRA2A-209ENST00000494255 PTPRMP28827 1452 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms