RNA–Protein interactions for RNA: ENST00000494187.1

MINDY4-203, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 3,573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-203ENST00000494187 PTPRKQ15262 1439 aa12.7□□□□□ -0.38
MINDY4-203ENST00000494187 PTPRGP23470 1445 aa12.7□□□□□ -0.38
MINDY4-203ENST00000494187 SAFB2Q14151 953 aaKnown RBP eCLIP12.69□□□□□ -0.38
MINDY4-203ENST00000494187 DAXXQ9UER7 740 aaPredicted RBP12.69□□□□□ -0.38
MINDY4-203ENST00000494187 PLB1Q6P1J6 1458 aa12.69□□□□□ -0.38
MINDY4-203ENST00000494187 TNNT2P45379 298 aaPredicted RBP12.69□□□□□ -0.38
MINDY4-203ENST00000494187 MLECQ14165 292 aa12.69□□□□□ -0.38
MINDY4-203ENST00000494187 NBPF8Q3BBV2 869 aa12.69□□□□□ -0.38
MINDY4-203ENST00000494187 WDR97A6NE52 1622 aa12.68□□□□□ -0.38
MINDY4-203ENST00000494187 CCDC184Q52MB2 194 aa12.67□□□□□ -0.38
MINDY4-203ENST00000494187 AFAP1Q8N556 730 aa12.67□□□□□ -0.38
MINDY4-203ENST00000494187 PLEKHG5O94827 1062 aa12.66□□□□□ -0.38
MINDY4-203ENST00000494187 FYCO1Q9BQS8 1478 aa12.66□□□□□ -0.38
MINDY4-203ENST00000494187 ST20-MTHFSA0A0A6YYL1 179 aa12.65□□□□□ -0.38
MINDY4-203ENST00000494187 KIF3BO15066 747 aa12.65□□□□□ -0.38
MINDY4-203ENST00000494187 C11orf95C9JLR9 678 aaPredicted RBP12.64□□□□□ -0.39
MINDY4-203ENST00000494187 CYB5RLQ6IPT4 315 aa12.63□□□□□ -0.39
MINDY4-203ENST00000494187 STAG3Q9UJ98 1225 aa12.63□□□□□ -0.39
MINDY4-203ENST00000494187 WASHC2AQ641Q2 1341 aa12.62□□□□□ -0.39
MINDY4-203ENST00000494187 NAIPQ13075 1403 aa12.61□□□□□ -0.39
MINDY4-203ENST00000494187 EPRSP07814 1512 aaKnown RBP12.61□□□□□ -0.39
MINDY4-203ENST00000494187 ANKRD30AQ9BXX3 1397 aa12.61□□□□□ -0.39
MINDY4-203ENST00000494187 WDR62O43379 1518 aa12.61□□□□□ -0.39
MINDY4-203ENST00000494187 B4GALNT3Q6L9W6 998 aa12.6□□□□□ -0.39
MINDY4-203ENST00000494187 NEUROD2Q15784 382 aa12.59□□□□□ -0.39
MINDY4-203ENST00000494187 TIMELESSQ9UNS1 1208 aa12.59□□□□□ -0.39
MINDY4-203ENST00000494187 UACAQ9BZF9 1416 aa12.59□□□□□ -0.39
MINDY4-203ENST00000494187 EFCAB2Q5VUJ9 269 aa12.59□□□□□ -0.39
MINDY4-203ENST00000494187 NBPF1Q3BBV0 1214 aa12.58□□□□□ -0.4
MINDY4-203ENST00000494187 IFT140Q96RY7 1462 aa12.58□□□□□ -0.4
MINDY4-203ENST00000494187 NPM2Q86SE8 214 aaKnown RBP12.56□□□□□ -0.4
MINDY4-203ENST00000494187 STK26Q9P289 416 aa12.56□□□□□ -0.4
MINDY4-203ENST00000494187 IQGAP2Q13576 1575 aa12.55□□□□□ -0.4
MINDY4-203ENST00000494187 SPAG9O60271 1321 aaKnown RBP12.55□□□□□ -0.4
MINDY4-203ENST00000494187 EFCAB5A4FU69 1503 aa12.54□□□□□ -0.4
MINDY4-203ENST00000494187 ARHGEF11O15085 1522 aa12.54□□□□□ -0.4
MINDY4-203ENST00000494187 KIF15Q9NS87 1388 aa12.54□□□□□ -0.4
MINDY4-203ENST00000494187 ROCK2O75116 1388 aaKnown RBP12.54□□□□□ -0.4
MINDY4-203ENST00000494187 OSCARQ8IYS5 282 aa12.54□□□□□ -0.4
MINDY4-203ENST00000494187 HFM1A2PYH4 1435 aa12.53□□□□□ -0.4
MINDY4-203ENST00000494187 MAPKBP1O60336 1514 aa12.53□□□□□ -0.4
MINDY4-203ENST00000494187 GRIN2AQ12879 1464 aa12.53□□□□□ -0.4
MINDY4-203ENST00000494187 KIF7Q2M1P5 1343 aa12.53□□□□□ -0.4
MINDY4-203ENST00000494187 UBE2Q2Q8WVN8 375 aa12.52□□□□□ -0.4
MINDY4-203ENST00000494187 PRKRIP1Q9H875 184 aaPredicted RBP12.52□□□□□ -0.4
MINDY4-203ENST00000494187 KIAA0586Q9BVV6 1533 aa12.52□□□□□ -0.41
MINDY4-203ENST00000494187 ANKRD50Q9ULJ7 1429 aa12.52□□□□□ -0.41
MINDY4-203ENST00000494187 PPM1GO15355 546 aaPredicted RBP12.5□□□□□ -0.41
MINDY4-203ENST00000494187 CCDC136Q96JN2 1154 aa12.5□□□□□ -0.41
MINDY4-203ENST00000494187 ARID4BQ4LE39 1312 aaPredicted RBP12.5□□□□□ -0.41
MINDY4-203ENST00000494187 ESF1Q9H501 851 aaKnown RBP12.5□□□□□ -0.41
MINDY4-203ENST00000494187 USP47Q96K76 1375 aa12.49□□□□□ -0.41
MINDY4-203ENST00000494187 CUL7Q14999 1698 aa12.49□□□□□ -0.41
MINDY4-203ENST00000494187 DAPK1P53355 1430 aa12.49□□□□□ -0.41
MINDY4-203ENST00000494187 ABCC5O15440 1437 aa12.48□□□□□ -0.41
MINDY4-203ENST00000494187 TRAK1Q9UPV9 953 aa12.48□□□□□ -0.41
MINDY4-203ENST00000494187 KNSTRNQ9Y448 316 aa12.48□□□□□ -0.41
MINDY4-203ENST00000494187 TROQ12816 1431 aaPredicted RBP12.48□□□□□ -0.41
MINDY4-203ENST00000494187 CCER2I3L3R5 266 aa12.48□□□□□ -0.41
MINDY4-203ENST00000494187 WDR43Q15061 677 aaKnown RBP eCLIP12.47□□□□□ -0.41
MINDY4-203ENST00000494187 PTPN23Q9H3S7 1636 aa12.46□□□□□ -0.41
MINDY4-203ENST00000494187 MAGI3Q5TCQ9 1506 aa12.46□□□□□ -0.42
MINDY4-203ENST00000494187 EHBP1L1Q8N3D4 1523 aa12.46□□□□□ -0.42
MINDY4-203ENST00000494187 RAPGEF3O95398 923 aa12.46□□□□□ -0.42
MINDY4-203ENST00000494187 SOX12O15370 315 aa12.45□□□□□ -0.42
MINDY4-203ENST00000494187 CANXP27824 592 aaKnown RBP12.45□□□□□ -0.42
MINDY4-203ENST00000494187 PANK3Q9H999 370 aa12.45□□□□□ -0.42
MINDY4-203ENST00000494187 SUPT6HQ7KZ85 1726 aaKnown RBP12.45□□□□□ -0.42
MINDY4-203ENST00000494187 TMEM132EQ6IEE7 984 aa12.45□□□□□ -0.42
MINDY4-203ENST00000494187 NUP153P49790 1475 aaKnown RBP12.45□□□□□ -0.42
MINDY4-203ENST00000494187 NUTM2FA1L443 756 aa12.44□□□□□ -0.42
MINDY4-203ENST00000494187 CCDC146Q8IYE0 955 aa12.44□□□□□ -0.42
MINDY4-203ENST00000494187 SYNJ2O15056 1496 aa12.43□□□□□ -0.42
MINDY4-203ENST00000494187 CCDC7Q96M83 1385 aa12.43□□□□□ -0.42
MINDY4-203ENST00000494187 CCDC144AA2RUR9 1427 aa12.43□□□□□ -0.42
MINDY4-203ENST00000494187 C9orf84Q5VXU9 1444 aa12.42□□□□□ -0.42
MINDY4-203ENST00000494187 TMF1P82094 1093 aa12.42□□□□□ -0.42
MINDY4-203ENST00000494187 HECW1Q76N89 1606 aa12.42□□□□□ -0.42
MINDY4-203ENST00000494187 WASHC2CQ9Y4E1 1318 aa12.42□□□□□ -0.42
MINDY4-203ENST00000494187 PLIN1O60240 522 aa12.41□□□□□ -0.42
MINDY4-203ENST00000494187 TSHZ2Q9NRE2 1034 aa12.41□□□□□ -0.42
MINDY4-203ENST00000494187 ARHGAP5Q13017 1502 aa12.41□□□□□ -0.42
MINDY4-203ENST00000494187 CFAP70Q5T0N1 1121 aa12.4□□□□□ -0.42
MINDY4-203ENST00000494187 ANKRD30BQ9BXX2 1392 aa12.39□□□□□ -0.43
MINDY4-203ENST00000494187 CTTNBP2Q8WZ74 1663 aa12.39□□□□□ -0.43
MINDY4-203ENST00000494187 CAMSAP2Q08AD1 1489 aa12.39□□□□□ -0.43
MINDY4-203ENST00000494187 TRHP20396 242 aaPredicted RBP12.39□□□□□ -0.43
MINDY4-203ENST00000494187 NCOA1Q15788 1441 aa12.38□□□□□ -0.43
MINDY4-203ENST00000494187 SCAPERQ9BY12 1400 aa12.38□□□□□ -0.43
MINDY4-203ENST00000494187 EIF5BO60841 1220 aaKnown RBP12.38□□□□□ -0.43
MINDY4-203ENST00000494187 MIA2Q96PC5 1412 aa12.38□□□□□ -0.43
MINDY4-203ENST00000494187 ATP10BO94823 1461 aa12.38□□□□□ -0.43
MINDY4-203ENST00000494187 MAP3K1Q13233 1512 aa12.38□□□□□ -0.43
MINDY4-203ENST00000494187 DISP1Q96F81 1524 aa12.38□□□□□ -0.43
MINDY4-203ENST00000494187 GPATCH8Q9UKJ3 1502 aaKnown RBP12.37□□□□□ -0.43
MINDY4-203ENST00000494187 SRPK2P78362 688 aaKnown RBP12.37□□□□□ -0.43
MINDY4-203ENST00000494187 POGKQ9P215 609 aa12.37□□□□□ -0.43
MINDY4-203ENST00000494187 RRP7AQ9Y3A4 280 aaKnown RBP12.37□□□□□ -0.43
MINDY4-203ENST00000494187 EIF4G3O43432 1585 aaKnown RBP12.37□□□□□ -0.43
MINDY4-203ENST00000494187 MAGI1Q96QZ7 1491 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms