RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ARHGAP5Q13017 1502 aa21.84■■□□□ 1.09
CCM2-217ENST00000492883 LRRC9Q6ZRR7 1453 aa21.83■■□□□ 1.09
CCM2-217ENST00000492883 GPATCH8Q9UKJ3 1502 aaKnown RBP21.81■■□□□ 1.08
CCM2-217ENST00000492883 SCAPERQ9BY12 1400 aa21.8■■□□□ 1.08
CCM2-217ENST00000492883 DENND4BO75064 1496 aaPredicted RBP21.79■■□□□ 1.08
CCM2-217ENST00000492883 ADGRL1O94910 1474 aa21.78■■□□□ 1.08
CCM2-217ENST00000492883 CFAP74Q9C0B2 1584 aa21.78■■□□□ 1.08
CCM2-217ENST00000492883 MYO5CQ9NQX4 1742 aa21.77■■□□□ 1.08
CCM2-217ENST00000492883 NCOA2Q15596 1464 aa21.77■■□□□ 1.08
CCM2-217ENST00000492883 AFAP1Q8N556 730 aa21.72■■□□□ 1.07
CCM2-217ENST00000492883 PREX2Q70Z35 1606 aa21.72■■□□□ 1.07
CCM2-217ENST00000492883 MYT1LQ9UL68 1186 aa21.71■■□□□ 1.07
CCM2-217ENST00000492883 SUPT6HQ7KZ85 1726 aaKnown RBP21.71■■□□□ 1.07
CCM2-217ENST00000492883 HNRNPMP52272 730 aaKnown RBP eCLIP21.7■■□□□ 1.062e-6■■■□□ 15.7
CCM2-217ENST00000492883 ZNF644Q9H582 1327 aaPredicted RBP21.69■■□□□ 1.06
CCM2-217ENST00000492883 CDC42BPBQ9Y5S2 1711 aa21.69■■□□□ 1.06
CCM2-217ENST00000492883 POGZQ7Z3K3 1410 aa21.68■■□□□ 1.06
CCM2-217ENST00000492883 CDC42BPAQ5VT25 1732 aa21.67■■□□□ 1.06
CCM2-217ENST00000492883 PPARGC1BQ86YN6 1023 aaKnown RBP21.65■■□□□ 1.06
CCM2-217ENST00000492883 PLEKHH2Q8IVE3 1493 aa21.64■■□□□ 1.06
CCM2-217ENST00000492883 KIAA1107Q9UPP5 1409 aa21.64■■□□□ 1.06
CCM2-217ENST00000492883 TRAPPC8Q9Y2L5 1435 aa21.64■■□□□ 1.06
CCM2-217ENST00000492883 ARHGEF12Q9NZN5 1544 aa21.64■■□□□ 1.05
CCM2-217ENST00000492883 ZNF518AQ6AHZ1 1483 aa21.64■■□□□ 1.05
CCM2-217ENST00000492883 FRMPD1Q5SYB0 1578 aa21.63■■□□□ 1.05
CCM2-217ENST00000492883 ABCC1P33527 1531 aa21.62■■□□□ 1.05
CCM2-217ENST00000492883 MYOM3Q5VTT5 1437 aa21.62■■□□□ 1.05
CCM2-217ENST00000492883 SAMD9LQ8IVG5 1584 aa21.61■■□□□ 1.05
CCM2-217ENST00000492883 ITSN2Q9NZM3 1697 aa21.6■■□□□ 1.05
CCM2-217ENST00000492883 MAGI2Q86UL8 1455 aa21.6■■□□□ 1.05
CCM2-217ENST00000492883 RSPH4AQ5TD94 716 aa21.59■■□□□ 1.05
CCM2-217ENST00000492883 MIA2Q96PC5 1412 aa21.59■■□□□ 1.05
CCM2-217ENST00000492883 SPAG9O60271 1321 aaKnown RBP21.58■■□□□ 1.05
CCM2-217ENST00000492883 ARID4BQ4LE39 1312 aaPredicted RBP21.58■■□□□ 1.05
CCM2-217ENST00000492883 RICTORQ6R327 1708 aa21.58■■□□□ 1.05
CCM2-217ENST00000492883 YEATS2Q9ULM3 1422 aa21.58■■□□□ 1.05
CCM2-217ENST00000492883 SYCP2Q9BX26 1530 aa21.58■■□□□ 1.04
CCM2-217ENST00000492883 ZMYM4Q5VZL5 1548 aa21.57■■□□□ 1.04
CCM2-217ENST00000492883 CAMSAP2Q08AD1 1489 aa21.55■■□□□ 1.04
CCM2-217ENST00000492883 ZFYVE16Q7Z3T8 1539 aa21.55■■□□□ 1.04
CCM2-217ENST00000492883 MBD5Q9P267 1494 aa21.54■■□□□ 1.04
CCM2-217ENST00000492883 MLH3Q9UHC1 1453 aa21.53■■□□□ 1.04
CCM2-217ENST00000492883 TSPY4P0CV99 314 aa21.53■■□□□ 1.04
CCM2-217ENST00000492883 TSPY10P0CW01 314 aa21.53■■□□□ 1.04
CCM2-217ENST00000492883 KDM5CP41229 1560 aa21.53■■□□□ 1.04
CCM2-217ENST00000492883 ATP10AO60312 1499 aa21.51■■□□□ 1.03
CCM2-217ENST00000492883 FGD6Q6ZV73 1430 aa21.5■■□□□ 1.03
CCM2-217ENST00000492883 KDM4FA0A1W2PPD8 638 aa21.5■■□□□ 1.03
CCM2-217ENST00000492883 FAM50AQ14320 339 aaKnown RBP21.49■■□□□ 1.03
CCM2-217ENST00000492883 ARHGEF40Q8TER5 1519 aa21.49■■□□□ 1.03
CCM2-217ENST00000492883 HECW2Q9P2P5 1572 aa21.48■■□□□ 1.03
CCM2-217ENST00000492883 CCDC141Q6ZP82 1450 aa21.47■■□□□ 1.03
CCM2-217ENST00000492883 C9orf84Q5VXU9 1444 aa21.46■■□□□ 1.03
CCM2-217ENST00000492883 AEBP2Q6ZN18 517 aaPredicted RBP21.46■■□□□ 1.03
CCM2-217ENST00000492883 MLECQ14165 292 aa21.45■■□□□ 1.02
CCM2-217ENST00000492883 RTEL1-TNFRSF6BF6WH68 1400 aa21.43■■□□□ 1.02
CCM2-217ENST00000492883 PTPN23Q9H3S7 1636 aa21.42■■□□□ 1.02
CCM2-217ENST00000492883 ATP7AQ04656 1500 aa21.41■■□□□ 1.02
CCM2-217ENST00000492883 TCOF1Q13428 1488 aaKnown RBP21.41■■□□□ 1.02
CCM2-217ENST00000492883 ARHGEF5Q12774 1597 aa21.4■■□□□ 1.02
CCM2-217ENST00000492883 DIP2CQ9Y2E4 1556 aa21.4■■□□□ 1.02
CCM2-217ENST00000492883 KIDINS220Q9ULH0 1771 aa21.38■■□□□ 1.01
CCM2-217ENST00000492883 ABCC5O15440 1437 aa21.38■■□□□ 1.01
CCM2-217ENST00000492883 ABCA6Q8N139 1617 aa21.37■■□□□ 1.01
CCM2-217ENST00000492883 CHIC2Q9UKJ5 165 aa21.36■■□□□ 1.01
CCM2-217ENST00000492883 DAPK1P53355 1430 aa21.36■■□□□ 1.01
CCM2-217ENST00000492883 INO80Q9ULG1 1556 aaPredicted RBP21.36■■□□□ 1.01
CCM2-217ENST00000492883 A2MP01023 1474 aa21.35■■□□□ 1.01
CCM2-217ENST00000492883 DHX29Q7Z478 1369 aaKnown RBP21.34■■□□□ 1.01
CCM2-217ENST00000492883 REREQ9P2R6 1566 aa21.32■■□□□ 1
CCM2-217ENST00000492883 ITGAEP38570 1179 aa21.32■■□□□ 1
CCM2-217ENST00000492883 ESF1Q9H501 851 aaKnown RBP21.32■■□□□ 1
CCM2-217ENST00000492883 RRP7BPQ9NSQ0 103 aa21.32■■□□□ 1
CCM2-217ENST00000492883 GGT6Q6P531 493 aa21.3■■□□□ 1
CCM2-217ENST00000492883 AGLP35573 1532 aa21.29■■□□□ 1
CCM2-217ENST00000492883 KIF3BO15066 747 aa21.29■■□□□ 1
CCM2-217ENST00000492883 SHANK2Q9UPX8 1470 aa21.28■■□□□ 1
CCM2-217ENST00000492883 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.28■■□□□ 1
CCM2-217ENST00000492883 SIGLEC1Q9BZZ2 1709 aa21.28■■□□□ 1
CCM2-217ENST00000492883 MAST1Q9Y2H9 1570 aa21.27■■□□□ 1
CCM2-217ENST00000492883 BCORL1Q5H9F3 1711 aa21.27■■□□□ 1
CCM2-217ENST00000492883 ANKRD30AQ9BXX3 1397 aa21.27■■□□□ 1
CCM2-217ENST00000492883 PLPPR3Q6T4P5 718 aa21.27■■□□□ 1
CCM2-217ENST00000492883 DNMT1P26358 1616 aaKnown RBP21.26■□□□□ 0.99
CCM2-217ENST00000492883 RRBP1Q9P2E9 1410 aaKnown RBP21.26■□□□□ 0.99
CCM2-217ENST00000492883 KIF15Q9NS87 1388 aa21.25■□□□□ 0.99
CCM2-217ENST00000492883 ADAMTSL3P82987 1691 aa21.24■□□□□ 0.99
CCM2-217ENST00000492883 ADGBQ8N7X0 1667 aa21.22■□□□□ 0.99
CCM2-217ENST00000492883 PPP6R1Q9UPN7 881 aa21.22■□□□□ 0.99
CCM2-217ENST00000492883 PLXNC1O60486 1568 aa21.22■□□□□ 0.99
CCM2-217ENST00000492883 NCOA1Q15788 1441 aa21.21■□□□□ 0.99
CCM2-217ENST00000492883 PTPRMP28827 1452 aa21.21■□□□□ 0.99
CCM2-217ENST00000492883 PTPRKQ15262 1439 aa21.21■□□□□ 0.99
CCM2-217ENST00000492883 MADDQ8WXG6 1647 aa21.2■□□□□ 0.98
CCM2-217ENST00000492883 DUOX2Q9NRD8 1548 aa21.19■□□□□ 0.98
CCM2-217ENST00000492883 CEBPAP49715 358 aaPredicted RBP21.18■□□□□ 0.98
CCM2-217ENST00000492883 CROCC2H7BZ55 1655 aa21.17■□□□□ 0.98
CCM2-217ENST00000492883 ADGRL2O95490 1459 aa21.16■□□□□ 0.98
CCM2-217ENST00000492883 WASHC2CQ9Y4E1 1318 aa21.16■□□□□ 0.98
CCM2-217ENST00000492883 CNTLNQ9NXG0 1405 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms