RNA–Protein interactions for RNA: ENST00000492719.5

GAPDH-209, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 3

Gene GAPDH, Length 930 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-209ENST00000492719 PRXQ9BXM0 1461 aa22.81■■□□□ 1.24
GAPDH-209ENST00000492719 HECW1Q76N89 1606 aa22.81■■□□□ 1.24
GAPDH-209ENST00000492719 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.8■■□□□ 1.24
GAPDH-209ENST00000492719 HNRNPUL2Q1KMD3 747 aaKnown RBP22.8■■□□□ 1.24
GAPDH-209ENST00000492719 UBAP1LF5GYI3 381 aa22.78■■□□□ 1.24
GAPDH-209ENST00000492719 P3H3Q8IVL6 736 aa22.78■■□□□ 1.24
GAPDH-209ENST00000492719 RAPGEF6Q8TEU7 1601 aa22.75■■□□□ 1.23
GAPDH-209ENST00000492719 MAGI2Q86UL8 1455 aa22.74■■□□□ 1.23
GAPDH-209ENST00000492719 FAM9AQ8IZU1 332 aaPredicted RBP22.72■■□□□ 1.23
GAPDH-209ENST00000492719 C3P01024 1663 aa22.7■■□□□ 1.22
GAPDH-209ENST00000492719 C9orf84Q5VXU9 1444 aa22.69■■□□□ 1.22
GAPDH-209ENST00000492719 ATP10AO60312 1499 aa22.67■■□□□ 1.22
GAPDH-209ENST00000492719 NCOA1Q15788 1441 aa22.66■■□□□ 1.22
GAPDH-209ENST00000492719 CSRNP3Q8WYN3 585 aa22.66■■□□□ 1.22
GAPDH-209ENST00000492719 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.66■■□□□ 1.221e-323■■■□□ 18.8
GAPDH-209ENST00000492719 ZNF335Q9H4Z2 1342 aaPredicted RBP22.64■■□□□ 1.22
GAPDH-209ENST00000492719 NUP153P49790 1475 aaKnown RBP22.62■■□□□ 1.21
GAPDH-209ENST00000492719 PHF23Q9BUL5 403 aaPredicted RBP22.62■■□□□ 1.21
GAPDH-209ENST00000492719 SCAF1Q9H7N4 1312 aaKnown RBP22.61■■□□□ 1.21
GAPDH-209ENST00000492719 HSPA1LP34931 641 aa22.61■■□□□ 1.21
GAPDH-209ENST00000492719 SCAPERQ9BY12 1400 aa22.61■■□□□ 1.21
GAPDH-209ENST00000492719 CAMSAP1Q5T5Y3 1602 aa22.59■■□□□ 1.21
GAPDH-209ENST00000492719 EEA1Q15075 1411 aa22.57■■□□□ 1.2
GAPDH-209ENST00000492719 SAMD9Q5K651 1589 aa22.56■■□□□ 1.2
GAPDH-209ENST00000492719 PLEKHD1A6NEE1 506 aa22.54■■□□□ 1.2
GAPDH-209ENST00000492719 PIP4K2BP78356 416 aa22.54■■□□□ 1.2
GAPDH-209ENST00000492719 TRAPPC8Q9Y2L5 1435 aa22.52■■□□□ 1.2
GAPDH-209ENST00000492719 NCKAP5LQ9HCH0 1330 aa22.52■■□□□ 1.2
GAPDH-209ENST00000492719 SUPT6HQ7KZ85 1726 aaKnown RBP22.48■■□□□ 1.19
GAPDH-209ENST00000492719 DIP2CQ9Y2E4 1556 aa22.47■■□□□ 1.19
GAPDH-209ENST00000492719 ESF1Q9H501 851 aaKnown RBP22.46■■□□□ 1.19
GAPDH-209ENST00000492719 MYT1LQ9UL68 1186 aa22.44■■□□□ 1.18
GAPDH-209ENST00000492719 MYO5CQ9NQX4 1742 aa22.43■■□□□ 1.18
GAPDH-209ENST00000492719 ABCA6Q8N139 1617 aa22.43■■□□□ 1.18
GAPDH-209ENST00000492719 PLCH2O75038 1416 aa22.43■■□□□ 1.18
GAPDH-209ENST00000492719 KDM5CP41229 1560 aa22.4■■□□□ 1.18
GAPDH-209ENST00000492719 REREQ9P2R6 1566 aa22.4■■□□□ 1.18
GAPDH-209ENST00000492719 ZNF518AQ6AHZ1 1483 aa22.4■■□□□ 1.18
GAPDH-209ENST00000492719 SENP3Q9H4L4 574 aaPredicted RBP22.37■■□□□ 1.17
GAPDH-209ENST00000492719 CDK13Q14004 1512 aaKnown RBP22.36■■□□□ 1.17
GAPDH-209ENST00000492719 ZNF142P52746 1687 aaPredicted RBP22.36■■□□□ 1.17
GAPDH-209ENST00000492719 TOM1O60784 492 aa22.36■■□□□ 1.17
GAPDH-209ENST00000492719 RANGAP1P46060 587 aaPredicted RBP22.36■■□□□ 1.17
GAPDH-209ENST00000492719 AGLP35573 1532 aa22.36■■□□□ 1.17
GAPDH-209ENST00000492719 MYO3AQ8NEV4 1616 aa22.35■■□□□ 1.17
GAPDH-209ENST00000492719 AFAP1Q8N556 730 aa22.35■■□□□ 1.17
GAPDH-209ENST00000492719 CHIC1Q5VXU3 224 aa22.34■■□□□ 1.17
GAPDH-209ENST00000492719 PPP6R1Q9UPN7 881 aa22.33■■□□□ 1.17
GAPDH-209ENST00000492719 PLA2R1Q13018 1463 aa22.33■■□□□ 1.16
GAPDH-209ENST00000492719 MROH2AA6NES4 1674 aa22.33■■□□□ 1.16
GAPDH-209ENST00000492719 CNTLNQ9NXG0 1405 aa22.32■■□□□ 1.16
GAPDH-209ENST00000492719 EFCAB2Q5VUJ9 269 aa22.32■■□□□ 1.16
GAPDH-209ENST00000492719 TCOF1Q13428 1488 aaKnown RBP22.32■■□□□ 1.16
GAPDH-209ENST00000492719 NPATQ14207 1427 aa22.31■■□□□ 1.16
GAPDH-209ENST00000492719 PKD2Q13563 968 aa22.31■■□□□ 1.16
GAPDH-209ENST00000492719 CEP170BQ9Y4F5 1589 aaPredicted RBP22.29■■□□□ 1.16
GAPDH-209ENST00000492719 ARHGAP5Q13017 1502 aa22.27■■□□□ 1.16
GAPDH-209ENST00000492719 CPS1P31327 1500 aa22.26■■□□□ 1.15
GAPDH-209ENST00000492719 ALKQ9UM73 1620 aa22.26■■□□□ 1.15
GAPDH-209ENST00000492719 KIF14Q15058 1648 aa22.25■■□□□ 1.15
GAPDH-209ENST00000492719 RGS17Q9UGC6 210 aaPredicted RBP22.25■■□□□ 1.15
GAPDH-209ENST00000492719 CLTCQ00610 1675 aaKnown RBP22.23■■□□□ 1.15
GAPDH-209ENST00000492719 POLR1AO95602 1720 aaPredicted RBP22.23■■□□□ 1.15
GAPDH-209ENST00000492719 MLH3Q9UHC1 1453 aa22.22■■□□□ 1.15
GAPDH-209ENST00000492719 SETD1AO15047 1707 aaKnown RBP22.22■■□□□ 1.15
GAPDH-209ENST00000492719 ZMYM3Q14202 1370 aa22.22■■□□□ 1.15
GAPDH-209ENST00000492719 SHANK2Q9UPX8 1470 aa22.2■■□□□ 1.14
GAPDH-209ENST00000492719 KIDINS220Q9ULH0 1771 aa22.2■■□□□ 1.14
GAPDH-209ENST00000492719 PTPRKQ15262 1439 aa22.19■■□□□ 1.14
GAPDH-209ENST00000492719 ITSN2Q9NZM3 1697 aa22.17■■□□□ 1.14
GAPDH-209ENST00000492719 CDC42BPBQ9Y5S2 1711 aa22.16■■□□□ 1.14
GAPDH-209ENST00000492719 NEURL4Q96JN8 1562 aa22.16■■□□□ 1.14
GAPDH-209ENST00000492719 UBTFP17480 764 aaKnown RBP22.14■■□□□ 1.13
GAPDH-209ENST00000492719 DNMT1P26358 1616 aaKnown RBP22.13■■□□□ 1.13
GAPDH-209ENST00000492719 ABCC1P33527 1531 aa22.11■■□□□ 1.13
GAPDH-209ENST00000492719 VWDEQ8N2E2 1590 aa22.11■■□□□ 1.13
GAPDH-209ENST00000492719 POTEAQ6S8J7 498 aa22.1■■□□□ 1.13
GAPDH-209ENST00000492719 ATP1B4Q9UN42 357 aaPredicted RBP22.09■■□□□ 1.13
GAPDH-209ENST00000492719 A2ML1A8K2U0 1454 aa22.08■■□□□ 1.12
GAPDH-209ENST00000492719 ARHGAP35Q9NRY4 1499 aa22.07■■□□□ 1.12
GAPDH-209ENST00000492719 RNF17Q9BXT8 1623 aaKnown RBP22.06■■□□□ 1.12
GAPDH-209ENST00000492719 FMN1Q68DA7 1419 aa22.06■■□□□ 1.12
GAPDH-209ENST00000492719 PREX2Q70Z35 1606 aa22.05■■□□□ 1.12
GAPDH-209ENST00000492719 STRCP1A6NGW2 1772 aa22.03■■□□□ 1.12
GAPDH-209ENST00000492719 TROQ12816 1431 aaPredicted RBP22.01■■□□□ 1.11
GAPDH-209ENST00000492719 EHMT2Q96KQ7 1210 aa22.01■■□□□ 1.11
GAPDH-209ENST00000492719 SAMD9LQ8IVG5 1584 aa21.99■■□□□ 1.11
GAPDH-209ENST00000492719 CLIP1P30622 1438 aa21.98■■□□□ 1.11
GAPDH-209ENST00000492719 CDK11AQ9UQ88 783 aaPredicted RBP21.98■■□□□ 1.11
GAPDH-209ENST00000492719 LRRC7Q96NW7 1537 aa21.96■■□□□ 1.11
GAPDH-209ENST00000492719 SYNMO15061 1565 aa21.95■■□□□ 1.11
GAPDH-209ENST00000492719 PLXNC1O60486 1568 aa21.95■■□□□ 1.11
GAPDH-209ENST00000492719 LRRIQ1Q96JM4 1722 aa21.95■■□□□ 1.1
GAPDH-209ENST00000492719 GGT6Q6P531 493 aa21.95■■□□□ 1.1
GAPDH-209ENST00000492719 IQGAP1P46940 1657 aa21.93■■□□□ 1.1
GAPDH-209ENST00000492719 CDC42BPAQ5VT25 1732 aa21.92■■□□□ 1.1
GAPDH-209ENST00000492719 NPHP4O75161 1426 aaPredicted RBP21.92■■□□□ 1.1
GAPDH-209ENST00000492719 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.92■■□□□ 1.1
GAPDH-209ENST00000492719 ATP7AQ04656 1500 aa21.9■■□□□ 1.1
GAPDH-209ENST00000492719 ANKLE2Q86XL3 938 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms