RNA–Protein interactions for RNA: ENST00000489207.1

ABCD4-213, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 379 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-213ENST00000489207 ASXL2Q76L83 1435 aa12.66□□□□□ -0.38
ABCD4-213ENST00000489207 KIF14Q15058 1648 aa12.66□□□□□ -0.38
ABCD4-213ENST00000489207 FAM50AQ14320 339 aaKnown RBP12.65□□□□□ -0.38
ABCD4-213ENST00000489207 ARAP3Q8WWN8 1544 aa12.65□□□□□ -0.38
ABCD4-213ENST00000489207 KIAA1107Q9UPP5 1409 aa12.64□□□□□ -0.39
ABCD4-213ENST00000489207 EFCAB2Q5VUJ9 269 aa12.64□□□□□ -0.39
ABCD4-213ENST00000489207 KCNH8Q96L42 1107 aa12.64□□□□□ -0.39
ABCD4-213ENST00000489207 ADGRL1O94910 1474 aa12.64□□□□□ -0.39
ABCD4-213ENST00000489207 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.63□□□□□ -0.39
ABCD4-213ENST00000489207 COL17A1Q9UMD9 1497 aaPredicted RBP12.63□□□□□ -0.39
ABCD4-213ENST00000489207 PPRC1Q5VV67 1664 aaKnown RBP12.63□□□□□ -0.39
ABCD4-213ENST00000489207 PTPN23Q9H3S7 1636 aa12.62□□□□□ -0.39
ABCD4-213ENST00000489207 ROCK1Q13464 1354 aa12.62□□□□□ -0.39
ABCD4-213ENST00000489207 AKNAQ7Z591 1439 aa12.61□□□□□ -0.39
ABCD4-213ENST00000489207 HECW2Q9P2P5 1572 aa12.6□□□□□ -0.39
ABCD4-213ENST00000489207 PLEKHH2Q8IVE3 1493 aa12.6□□□□□ -0.39
ABCD4-213ENST00000489207 ZNF644Q9H582 1327 aaPredicted RBP12.6□□□□□ -0.39
ABCD4-213ENST00000489207 ITSN2Q9NZM3 1697 aa12.59□□□□□ -0.39
ABCD4-213ENST00000489207 ABCC5O15440 1437 aa12.59□□□□□ -0.39
ABCD4-213ENST00000489207 PTPRKQ15262 1439 aa12.59□□□□□ -0.39
ABCD4-213ENST00000489207 MBD5Q9P267 1494 aa12.59□□□□□ -0.39
ABCD4-213ENST00000489207 HFM1A2PYH4 1435 aa12.58□□□□□ -0.4
ABCD4-213ENST00000489207 SETD5Q9C0A6 1442 aa12.58□□□□□ -0.4
ABCD4-213ENST00000489207 ABCA9Q8IUA7 1624 aa12.58□□□□□ -0.4
ABCD4-213ENST00000489207 TSPY4P0CV99 314 aa12.57□□□□□ -0.4
ABCD4-213ENST00000489207 TSPY10P0CW01 314 aa12.57□□□□□ -0.4
ABCD4-213ENST00000489207 CLSPNQ9HAW4 1339 aa12.57□□□□□ -0.4
ABCD4-213ENST00000489207 DAPK1P53355 1430 aa12.56□□□□□ -0.4
ABCD4-213ENST00000489207 CAMSAP2Q08AD1 1489 aa12.56□□□□□ -0.4
ABCD4-213ENST00000489207 GLI2P10070 1586 aa12.56□□□□□ -0.4
ABCD4-213ENST00000489207 CDC42BPAQ5VT25 1732 aa12.55□□□□□ -0.4
ABCD4-213ENST00000489207 ZEB1P37275 1124 aaPredicted RBP12.55□□□□□ -0.4
ABCD4-213ENST00000489207 ZNF777Q9ULD5 760 aaPredicted RBP12.54□□□□□ -0.4
ABCD4-213ENST00000489207 ARHGEF5Q12774 1597 aa12.54□□□□□ -0.4
ABCD4-213ENST00000489207 PREX2Q70Z35 1606 aa12.54□□□□□ -0.4
ABCD4-213ENST00000489207 NCOA1Q15788 1441 aa12.54□□□□□ -0.4
ABCD4-213ENST00000489207 CD109Q6YHK3 1445 aa12.54□□□□□ -0.4
ABCD4-213ENST00000489207 ADGRL2O95490 1459 aa12.53□□□□□ -0.4
ABCD4-213ENST00000489207 ITGAEP38570 1179 aa12.53□□□□□ -0.4
ABCD4-213ENST00000489207 HNRNPMP52272 730 aaKnown RBP eCLIP12.53□□□□□ -0.4
ABCD4-213ENST00000489207 NAIPQ13075 1403 aa12.53□□□□□ -0.4
ABCD4-213ENST00000489207 SHANK2Q9UPX8 1470 aa12.53□□□□□ -0.4
ABCD4-213ENST00000489207 TTC37Q6PGP7 1564 aa12.52□□□□□ -0.4
ABCD4-213ENST00000489207 DNMT1P26358 1616 aaKnown RBP12.52□□□□□ -0.4
ABCD4-213ENST00000489207 CDC42BPBQ9Y5S2 1711 aa12.52□□□□□ -0.41
ABCD4-213ENST00000489207 ANKRD30AQ9BXX3 1397 aa12.51□□□□□ -0.41
ABCD4-213ENST00000489207 RTEL1-TNFRSF6BF6WH68 1400 aa12.51□□□□□ -0.41
ABCD4-213ENST00000489207 ARHGAP5Q13017 1502 aa12.51□□□□□ -0.41
ABCD4-213ENST00000489207 RAB3GAP2Q9H2M9 1393 aa12.5□□□□□ -0.41
ABCD4-213ENST00000489207 FANCAO15360 1455 aa12.5□□□□□ -0.41
ABCD4-213ENST00000489207 MYO5CQ9NQX4 1742 aa12.5□□□□□ -0.41
ABCD4-213ENST00000489207 SAMD9LQ8IVG5 1584 aa12.49□□□□□ -0.41
ABCD4-213ENST00000489207 NEO1Q92859 1461 aa12.49□□□□□ -0.41
ABCD4-213ENST00000489207 CCDC141Q6ZP82 1450 aa12.48□□□□□ -0.41
ABCD4-213ENST00000489207 CHIC2Q9UKJ5 165 aa12.47□□□□□ -0.41
ABCD4-213ENST00000489207 MAST1Q9Y2H9 1570 aa12.47□□□□□ -0.41
ABCD4-213ENST00000489207 ARHGEF12Q9NZN5 1544 aa12.47□□□□□ -0.41
ABCD4-213ENST00000489207 MAP3K4Q9Y6R4 1608 aa12.46□□□□□ -0.41
ABCD4-213ENST00000489207 C9orf84Q5VXU9 1444 aa12.45□□□□□ -0.42
ABCD4-213ENST00000489207 DHX57Q6P158 1386 aaKnown RBP12.45□□□□□ -0.42
ABCD4-213ENST00000489207 CCER1Q8TC90 406 aaPredicted RBP12.45□□□□□ -0.42
ABCD4-213ENST00000489207 RRP7BPQ9NSQ0 103 aa12.45□□□□□ -0.42
ABCD4-213ENST00000489207 SCAPERQ9BY12 1400 aa12.45□□□□□ -0.42
ABCD4-213ENST00000489207 ABCC1P33527 1531 aa12.44□□□□□ -0.42
ABCD4-213ENST00000489207 AFAP1Q8N556 730 aa12.43□□□□□ -0.42
ABCD4-213ENST00000489207 TRAPPC8Q9Y2L5 1435 aa12.43□□□□□ -0.42
ABCD4-213ENST00000489207 SPAG9O60271 1321 aaKnown RBP12.42□□□□□ -0.42
ABCD4-213ENST00000489207 TIMELESSQ9UNS1 1208 aa12.42□□□□□ -0.42
ABCD4-213ENST00000489207 CFAP74Q9C0B2 1584 aa12.42□□□□□ -0.42
ABCD4-213ENST00000489207 ANKRD50Q9ULJ7 1429 aa12.41□□□□□ -0.42
ABCD4-213ENST00000489207 SYCP2Q9BX26 1530 aa12.41□□□□□ -0.42
ABCD4-213ENST00000489207 ZNF518AQ6AHZ1 1483 aa12.4□□□□□ -0.42
ABCD4-213ENST00000489207 TEX14Q8IWB6 1497 aa12.4□□□□□ -0.42
ABCD4-213ENST00000489207 MLH3Q9UHC1 1453 aa12.4□□□□□ -0.42
ABCD4-213ENST00000489207 KIF15Q9NS87 1388 aa12.4□□□□□ -0.42
ABCD4-213ENST00000489207 CROCC2H7BZ55 1655 aa12.39□□□□□ -0.43
ABCD4-213ENST00000489207 FBXO41Q8TF61 875 aa12.39□□□□□ -0.43
ABCD4-213ENST00000489207 DENND4BO75064 1496 aaPredicted RBP12.38□□□□□ -0.43
ABCD4-213ENST00000489207 GCC2Q8IWJ2 1684 aa12.38□□□□□ -0.43
ABCD4-213ENST00000489207 MPHOSPH9Q99550 1183 aa12.37□□□□□ -0.43
ABCD4-213ENST00000489207 DHX29Q7Z478 1369 aaKnown RBP12.37□□□□□ -0.43
ABCD4-213ENST00000489207 PLXNC1O60486 1568 aa12.37□□□□□ -0.43
ABCD4-213ENST00000489207 POGZQ7Z3K3 1410 aa12.37□□□□□ -0.43
ABCD4-213ENST00000489207 ERBINQ96RT1 1412 aa12.37□□□□□ -0.43
ABCD4-213ENST00000489207 DUOX2Q9NRD8 1548 aa12.36□□□□□ -0.43
ABCD4-213ENST00000489207 ADGBQ8N7X0 1667 aa12.35□□□□□ -0.43
ABCD4-213ENST00000489207 MAGI2Q86UL8 1455 aa12.35□□□□□ -0.43
ABCD4-213ENST00000489207 KDM5CP41229 1560 aa12.35□□□□□ -0.43
ABCD4-213ENST00000489207 TRIM52Q96A61 297 aa12.32□□□□□ -0.44
ABCD4-213ENST00000489207 KDM5DQ9BY66 1539 aa12.32□□□□□ -0.44
ABCD4-213ENST00000489207 RAPGEF3O95398 923 aa12.31□□□□□ -0.44
ABCD4-213ENST00000489207 ATP7AQ04656 1500 aa12.31□□□□□ -0.44
ABCD4-213ENST00000489207 SLC4A1APQ9BWU0 796 aaKnown RBP12.3□□□□□ -0.44
ABCD4-213ENST00000489207 PPP6R1Q9UPN7 881 aa12.3□□□□□ -0.44
ABCD4-213ENST00000489207 ZFYVE16Q7Z3T8 1539 aa12.3□□□□□ -0.44
ABCD4-213ENST00000489207 INO80Q9ULG1 1556 aaPredicted RBP12.3□□□□□ -0.44
ABCD4-213ENST00000489207 NUP155O75694 1391 aa12.3□□□□□ -0.44
ABCD4-213ENST00000489207 ANKRD30BQ9BXX2 1392 aa12.28□□□□□ -0.44
ABCD4-213ENST00000489207 PZPP20742 1482 aa12.27□□□□□ -0.44
ABCD4-213ENST00000489207 ZMYM4Q5VZL5 1548 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms