RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 CDC42BPAQ5VT25 1732 aa23.73■■□□□ 1.39
FDPS-213ENST00000489003 CCNB3Q8WWL7 1395 aa23.72■■□□□ 1.39
FDPS-213ENST00000489003 NCOA2Q15596 1464 aa23.7■■□□□ 1.38
FDPS-213ENST00000489003 SUPT6HQ7KZ85 1726 aaKnown RBP23.7■■□□□ 1.38
FDPS-213ENST00000489003 ARHGAP5Q13017 1502 aa23.69■■□□□ 1.38
FDPS-213ENST00000489003 RAPGEF3O95398 923 aa23.69■■□□□ 1.38
FDPS-213ENST00000489003 CFDP1Q9UEE9 299 aaPredicted RBP23.68■■□□□ 1.38
FDPS-213ENST00000489003 PREX2Q70Z35 1606 aa23.68■■□□□ 1.38
FDPS-213ENST00000489003 CFAP74Q9C0B2 1584 aa23.67■■□□□ 1.38
FDPS-213ENST00000489003 ZNF777Q9ULD5 760 aaPredicted RBP23.66■■□□□ 1.38
FDPS-213ENST00000489003 SCAPERQ9BY12 1400 aa23.65■■□□□ 1.38
FDPS-213ENST00000489003 DENND4BO75064 1496 aaPredicted RBP23.62■■□□□ 1.37
FDPS-213ENST00000489003 ADGRL1O94910 1474 aa23.62■■□□□ 1.37
FDPS-213ENST00000489003 ZNF644Q9H582 1327 aaPredicted RBP23.59■■□□□ 1.37
FDPS-213ENST00000489003 PPARGC1BQ86YN6 1023 aaKnown RBP23.58■■□□□ 1.37
FDPS-213ENST00000489003 AFAP1Q8N556 730 aa23.57■■□□□ 1.36
FDPS-213ENST00000489003 ARHGEF12Q9NZN5 1544 aa23.57■■□□□ 1.36
FDPS-213ENST00000489003 ITSN2Q9NZM3 1697 aa23.57■■□□□ 1.36
FDPS-213ENST00000489003 HNRNPMP52272 730 aaKnown RBP eCLIP23.56■■□□□ 1.36
FDPS-213ENST00000489003 SAMD9LQ8IVG5 1584 aa23.56■■□□□ 1.36
FDPS-213ENST00000489003 RICTORQ6R327 1708 aa23.56■■□□□ 1.36
FDPS-213ENST00000489003 FRMPD1Q5SYB0 1578 aa23.55■■□□□ 1.36
FDPS-213ENST00000489003 ABCC1P33527 1531 aa23.53■■□□□ 1.36
FDPS-213ENST00000489003 MYOM3Q5VTT5 1437 aa23.52■■□□□ 1.36
FDPS-213ENST00000489003 POGZQ7Z3K3 1410 aa23.52■■□□□ 1.36
FDPS-213ENST00000489003 KIAA1107Q9UPP5 1409 aa23.51■■□□□ 1.35
FDPS-213ENST00000489003 TRAPPC8Q9Y2L5 1435 aa23.51■■□□□ 1.35
FDPS-213ENST00000489003 PLEKHH2Q8IVE3 1493 aa23.49■■□□□ 1.35
FDPS-213ENST00000489003 MIA2Q96PC5 1412 aa23.48■■□□□ 1.35
FDPS-213ENST00000489003 SYCP2Q9BX26 1530 aa23.47■■□□□ 1.35
FDPS-213ENST00000489003 ZNF518AQ6AHZ1 1483 aa23.46■■□□□ 1.35
FDPS-213ENST00000489003 MBD5Q9P267 1494 aa23.45■■□□□ 1.34
FDPS-213ENST00000489003 ZMYM4Q5VZL5 1548 aa23.44■■□□□ 1.34
FDPS-213ENST00000489003 CAMSAP2Q08AD1 1489 aa23.43■■□□□ 1.34
FDPS-213ENST00000489003 MAGI2Q86UL8 1455 aa23.43■■□□□ 1.34
FDPS-213ENST00000489003 RSPH4AQ5TD94 716 aa23.42■■□□□ 1.34
FDPS-213ENST00000489003 MYT1LQ9UL68 1186 aa23.42■■□□□ 1.34
FDPS-213ENST00000489003 KDM5CP41229 1560 aa23.42■■□□□ 1.34
FDPS-213ENST00000489003 YEATS2Q9ULM3 1422 aa23.41■■□□□ 1.34
FDPS-213ENST00000489003 MLH3Q9UHC1 1453 aa23.4■■□□□ 1.34
FDPS-213ENST00000489003 FGD6Q6ZV73 1430 aa23.4■■□□□ 1.34
FDPS-213ENST00000489003 SPAG9O60271 1321 aaKnown RBP23.38■■□□□ 1.33
FDPS-213ENST00000489003 ZFYVE16Q7Z3T8 1539 aa23.38■■□□□ 1.33
FDPS-213ENST00000489003 PTPN23Q9H3S7 1636 aa23.37■■□□□ 1.33
FDPS-213ENST00000489003 KIDINS220Q9ULH0 1771 aa23.35■■□□□ 1.33
FDPS-213ENST00000489003 ATP10AO60312 1499 aa23.34■■□□□ 1.33
FDPS-213ENST00000489003 TCOF1Q13428 1488 aaKnown RBP23.34■■□□□ 1.33
FDPS-213ENST00000489003 ARHGEF5Q12774 1597 aa23.34■■□□□ 1.33
FDPS-213ENST00000489003 HECW2Q9P2P5 1572 aa23.34■■□□□ 1.33
FDPS-213ENST00000489003 ARHGEF40Q8TER5 1519 aa23.33■■□□□ 1.33
FDPS-213ENST00000489003 TSPY4P0CV99 314 aa23.33■■□□□ 1.33
FDPS-213ENST00000489003 TSPY10P0CW01 314 aa23.33■■□□□ 1.33
FDPS-213ENST00000489003 CCDC141Q6ZP82 1450 aa23.32■■□□□ 1.32
FDPS-213ENST00000489003 FAM50AQ14320 339 aaKnown RBP23.31■■□□□ 1.32
FDPS-213ENST00000489003 RTEL1-TNFRSF6BF6WH68 1400 aa23.29■■□□□ 1.32
FDPS-213ENST00000489003 ARID4BQ4LE39 1312 aaPredicted RBP23.29■■□□□ 1.32
FDPS-213ENST00000489003 DIP2CQ9Y2E4 1556 aa23.28■■□□□ 1.32
FDPS-213ENST00000489003 ATP7AQ04656 1500 aa23.28■■□□□ 1.32
FDPS-213ENST00000489003 ABCC5O15440 1437 aa23.27■■□□□ 1.32
FDPS-213ENST00000489003 ABCA6Q8N139 1617 aa23.27■■□□□ 1.32
FDPS-213ENST00000489003 KDM4FA0A1W2PPD8 638 aa23.27■■□□□ 1.32
FDPS-213ENST00000489003 INO80Q9ULG1 1556 aaPredicted RBP23.27■■□□□ 1.32
FDPS-213ENST00000489003 C9orf84Q5VXU9 1444 aa23.26■■□□□ 1.31
FDPS-213ENST00000489003 SIGLEC1Q9BZZ2 1709 aa23.25■■□□□ 1.31
FDPS-213ENST00000489003 DAPK1P53355 1430 aa23.23■■□□□ 1.31
FDPS-213ENST00000489003 DNMT1P26358 1616 aaKnown RBP23.22■■□□□ 1.31
FDPS-213ENST00000489003 MAST1Q9Y2H9 1570 aa23.2■■□□□ 1.3
FDPS-213ENST00000489003 CHIC2Q9UKJ5 165 aa23.2■■□□□ 1.3
FDPS-213ENST00000489003 REREQ9P2R6 1566 aa23.19■■□□□ 1.3
FDPS-213ENST00000489003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.19■■□□□ 1.33e-6■□□□□ 10.4
FDPS-213ENST00000489003 MLECQ14165 292 aa23.19■■□□□ 1.3
FDPS-213ENST00000489003 RRBP1Q9P2E9 1410 aaKnown RBP23.18■■□□□ 1.3
FDPS-213ENST00000489003 A2MP01023 1474 aa23.17■■□□□ 1.3
FDPS-213ENST00000489003 DHX29Q7Z478 1369 aaKnown RBP23.16■■□□□ 1.3
FDPS-213ENST00000489003 ADGBQ8N7X0 1667 aa23.16■■□□□ 1.3
FDPS-213ENST00000489003 BCORL1Q5H9F3 1711 aa23.16■■□□□ 1.3
FDPS-213ENST00000489003 CROCC2H7BZ55 1655 aa23.16■■□□□ 1.3
FDPS-213ENST00000489003 AGLP35573 1532 aa23.15■■□□□ 1.3
FDPS-213ENST00000489003 SHANK2Q9UPX8 1470 aa23.15■■□□□ 1.3
FDPS-213ENST00000489003 PTPRKQ15262 1439 aa23.14■■□□□ 1.29
FDPS-213ENST00000489003 ITGAEP38570 1179 aa23.13■■□□□ 1.29
FDPS-213ENST00000489003 RRP7BPQ9NSQ0 103 aa23.13■■□□□ 1.29
FDPS-213ENST00000489003 ADAMTSL3P82987 1691 aa23.12■■□□□ 1.29
FDPS-213ENST00000489003 PLXNC1O60486 1568 aa23.11■■□□□ 1.29
FDPS-213ENST00000489003 NCOA1Q15788 1441 aa23.09■■□□□ 1.29
FDPS-213ENST00000489003 ANKRD30AQ9BXX3 1397 aa23.09■■□□□ 1.29
FDPS-213ENST00000489003 KIF3BO15066 747 aa23.08■■□□□ 1.29
FDPS-213ENST00000489003 GGT6Q6P531 493 aa23.07■■□□□ 1.28
FDPS-213ENST00000489003 KIF15Q9NS87 1388 aa23.06■■□□□ 1.28
FDPS-213ENST00000489003 ADGRL2O95490 1459 aa23.05■■□□□ 1.28
FDPS-213ENST00000489003 MADDQ8WXG6 1647 aa23.04■■□□□ 1.28
FDPS-213ENST00000489003 DUOX2Q9NRD8 1548 aa23.04■■□□□ 1.28
FDPS-213ENST00000489003 AEBP2Q6ZN18 517 aaPredicted RBP23.04■■□□□ 1.28
FDPS-213ENST00000489003 ROCK1Q13464 1354 aa23.01■■□□□ 1.27
FDPS-213ENST00000489003 PPP6R1Q9UPN7 881 aa23■■□□□ 1.27
FDPS-213ENST00000489003 FER1L4A9Z1Z3 1794 aa22.99■■□□□ 1.27
FDPS-213ENST00000489003 RIMS1Q86UR5 1692 aaKnown RBP22.99■■□□□ 1.27
FDPS-213ENST00000489003 ESF1Q9H501 851 aaKnown RBP22.98■■□□□ 1.27
FDPS-213ENST00000489003 PTPRMP28827 1452 aa22.98■■□□□ 1.27
FDPS-213ENST00000489003 ERBINQ96RT1 1412 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms