RNA–Protein interactions for RNA: ENST00000488759.5

LRMDA-205, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 3

Gene LRMDA, Length 337 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-205ENST00000488759 ADAMTSL3P82987 1691 aa17.4■□□□□ 0.38
LRMDA-205ENST00000488759 FER1L4A9Z1Z3 1794 aa17.38■□□□□ 0.37
LRMDA-205ENST00000488759 POGZQ7Z3K3 1410 aa17.37■□□□□ 0.37
LRMDA-205ENST00000488759 PTPRMP28827 1452 aa17.37■□□□□ 0.37
LRMDA-205ENST00000488759 ZMYM4Q5VZL5 1548 aa17.37■□□□□ 0.37
LRMDA-205ENST00000488759 CCDC18Q5T9S5 1454 aa17.36■□□□□ 0.37
LRMDA-205ENST00000488759 SCAPERQ9BY12 1400 aa17.35■□□□□ 0.37
LRMDA-205ENST00000488759 TROQ12816 1431 aaPredicted RBP17.34■□□□□ 0.37
LRMDA-205ENST00000488759 MLECQ14165 292 aa17.34■□□□□ 0.37
LRMDA-205ENST00000488759 PLCH2O75038 1416 aa17.33■□□□□ 0.36
LRMDA-205ENST00000488759 EFCAB2Q5VUJ9 269 aa17.32■□□□□ 0.36
LRMDA-205ENST00000488759 PREX2Q70Z35 1606 aa17.32■□□□□ 0.36
LRMDA-205ENST00000488759 YEATS2Q9ULM3 1422 aa17.31■□□□□ 0.36
LRMDA-205ENST00000488759 CDC42BPBQ9Y5S2 1711 aa17.31■□□□□ 0.36
LRMDA-205ENST00000488759 FYCO1Q9BQS8 1478 aa17.3■□□□□ 0.36
LRMDA-205ENST00000488759 SIGLEC1Q9BZZ2 1709 aa17.3■□□□□ 0.36
LRMDA-205ENST00000488759 CASKIN1Q8WXD9 1431 aa17.29■□□□□ 0.36
LRMDA-205ENST00000488759 ZNF518AQ6AHZ1 1483 aa17.28■□□□□ 0.36
LRMDA-205ENST00000488759 MAGI2Q86UL8 1455 aa17.28■□□□□ 0.36
LRMDA-205ENST00000488759 ITSN2Q9NZM3 1697 aa17.28■□□□□ 0.36
LRMDA-205ENST00000488759 CDC42BPAQ5VT25 1732 aa17.27■□□□□ 0.36
LRMDA-205ENST00000488759 C9orf84Q5VXU9 1444 aa17.26■□□□□ 0.35
LRMDA-205ENST00000488759 ZNF777Q9ULD5 760 aaPredicted RBP17.23■□□□□ 0.35
LRMDA-205ENST00000488759 ATP10AO60312 1499 aa17.22■□□□□ 0.35
LRMDA-205ENST00000488759 ABCC1P33527 1531 aa17.21■□□□□ 0.35
LRMDA-205ENST00000488759 ILDR1Q86SU0 546 aaPredicted RBP17.21■□□□□ 0.35
LRMDA-205ENST00000488759 ABCA6Q8N139 1617 aa17.21■□□□□ 0.35
LRMDA-205ENST00000488759 KDM5CP41229 1560 aa17.2■□□□□ 0.34
LRMDA-205ENST00000488759 DIP2CQ9Y2E4 1556 aa17.19■□□□□ 0.34
LRMDA-205ENST00000488759 ESF1Q9H501 851 aaKnown RBP17.19■□□□□ 0.34
LRMDA-205ENST00000488759 PREX1Q8TCU6 1659 aa17.18■□□□□ 0.34
LRMDA-205ENST00000488759 LMTK3Q96Q04 1460 aa17.18■□□□□ 0.34
LRMDA-205ENST00000488759 MTUS2Q5JR59 1369 aa17.17■□□□□ 0.34
LRMDA-205ENST00000488759 AFAP1Q8N556 730 aa17.17■□□□□ 0.34
LRMDA-205ENST00000488759 SYCP2Q9BX26 1530 aa17.16■□□□□ 0.34
LRMDA-205ENST00000488759 SUPT6HQ7KZ85 1726 aaKnown RBP17.15■□□□□ 0.34
LRMDA-205ENST00000488759 SAMD9LQ8IVG5 1584 aa17.15■□□□□ 0.34
LRMDA-205ENST00000488759 ARHGEF12Q9NZN5 1544 aa17.14■□□□□ 0.33
LRMDA-205ENST00000488759 CCNB3Q8WWL7 1395 aa17.14■□□□□ 0.33
LRMDA-205ENST00000488759 HSPA2P54652 639 aa17.13■□□□□ 0.33
LRMDA-205ENST00000488759 CEP162Q5TB80 1403 aa17.13■□□□□ 0.33
LRMDA-205ENST00000488759 KIDINS220Q9ULH0 1771 aa17.12■□□□□ 0.33
LRMDA-205ENST00000488759 TRAPPC8Q9Y2L5 1435 aa17.12■□□□□ 0.33
LRMDA-205ENST00000488759 EHBP1L1Q8N3D4 1523 aa17.11■□□□□ 0.33
LRMDA-205ENST00000488759 CFDP1Q9UEE9 299 aaPredicted RBP17.09■□□□□ 0.33
LRMDA-205ENST00000488759 C3P01024 1663 aa17.09■□□□□ 0.33
LRMDA-205ENST00000488759 REREQ9P2R6 1566 aa17.08■□□□□ 0.32
LRMDA-205ENST00000488759 MLH3Q9UHC1 1453 aa17.08■□□□□ 0.32
LRMDA-205ENST00000488759 ATP7AQ04656 1500 aa17.07■□□□□ 0.32
LRMDA-205ENST00000488759 CEBPAP49715 358 aaPredicted RBP17.07■□□□□ 0.32
LRMDA-205ENST00000488759 PLEKHH2Q8IVE3 1493 aa17.06■□□□□ 0.32
LRMDA-205ENST00000488759 SPAG9O60271 1321 aaKnown RBP17.06■□□□□ 0.32
LRMDA-205ENST00000488759 TIAM1Q13009 1591 aa17.06■□□□□ 0.32
LRMDA-205ENST00000488759 GPATCH8Q9UKJ3 1502 aaKnown RBP17.06■□□□□ 0.32
LRMDA-205ENST00000488759 UHRF1BP1Q6BDS2 1440 aa17.05■□□□□ 0.32
LRMDA-205ENST00000488759 HNRNPMP52272 730 aaKnown RBP eCLIP17.04■□□□□ 0.321e-6■■□□□ 13.1
LRMDA-205ENST00000488759 ADGBQ8N7X0 1667 aa17.04■□□□□ 0.32
LRMDA-205ENST00000488759 CLTCQ00610 1675 aaKnown RBP17.03■□□□□ 0.32
LRMDA-205ENST00000488759 INO80Q9ULG1 1556 aaPredicted RBP17.02■□□□□ 0.32
LRMDA-205ENST00000488759 SETD1BQ9UPS6 1966 aaKnown RBP17.02■□□□□ 0.31
LRMDA-205ENST00000488759 AGLP35573 1532 aa17.01■□□□□ 0.31
LRMDA-205ENST00000488759 MROH2AA6NES4 1674 aa16.99■□□□□ 0.31
LRMDA-205ENST00000488759 CNTLNQ9NXG0 1405 aa16.98■□□□□ 0.31
LRMDA-205ENST00000488759 FBXO41Q8TF61 875 aa16.97■□□□□ 0.31
LRMDA-205ENST00000488759 A2MP01023 1474 aa16.96■□□□□ 0.31
LRMDA-205ENST00000488759 CAMSAP2Q08AD1 1489 aa16.94■□□□□ 0.3
LRMDA-205ENST00000488759 NCOA2Q15596 1464 aa16.94■□□□□ 0.3
LRMDA-205ENST00000488759 GGT6Q6P531 493 aa16.94■□□□□ 0.3
LRMDA-205ENST00000488759 KIAA1107Q9UPP5 1409 aa16.94■□□□□ 0.3
LRMDA-205ENST00000488759 STRCQ7RTU9 1775 aa16.93■□□□□ 0.3
LRMDA-205ENST00000488759 PLXNC1O60486 1568 aa16.93■□□□□ 0.3
LRMDA-205ENST00000488759 ZNF644Q9H582 1327 aaPredicted RBP16.93■□□□□ 0.3
LRMDA-205ENST00000488759 MYO3AQ8NEV4 1616 aa16.92■□□□□ 0.3
LRMDA-205ENST00000488759 VPS8Q8N3P4 1428 aa16.91■□□□□ 0.3
LRMDA-205ENST00000488759 LOC105371045A0A1W2PR82 267 aa16.91■□□□□ 0.3
LRMDA-205ENST00000488759 CCDC141Q6ZP82 1450 aa16.91■□□□□ 0.3
LRMDA-205ENST00000488759 DMRT2Q9Y5R5 561 aa16.89■□□□□ 0.29
LRMDA-205ENST00000488759 APLP2Q06481 763 aa16.87■□□□□ 0.29
LRMDA-205ENST00000488759 CAMSAP1Q5T5Y3 1602 aa16.87■□□□□ 0.29
LRMDA-205ENST00000488759 ZNF142P52746 1687 aaPredicted RBP16.86■□□□□ 0.29
LRMDA-205ENST00000488759 CERKQ8TCT0 537 aa16.85■□□□□ 0.29
LRMDA-205ENST00000488759 ZMYM3Q14202 1370 aa16.85■□□□□ 0.29
LRMDA-205ENST00000488759 LRRC9Q6ZRR7 1453 aa16.85■□□□□ 0.29
LRMDA-205ENST00000488759 NPATQ14207 1427 aa16.84■□□□□ 0.29
LRMDA-205ENST00000488759 CEP170BQ9Y4F5 1589 aaPredicted RBP16.84■□□□□ 0.29
LRMDA-205ENST00000488759 KDM5DQ9BY66 1539 aa16.82■□□□□ 0.28
LRMDA-205ENST00000488759 MBD5Q9P267 1494 aa16.82■□□□□ 0.28
LRMDA-205ENST00000488759 KIF3BO15066 747 aa16.82■□□□□ 0.28
LRMDA-205ENST00000488759 ARHGEF5Q12774 1597 aa16.81■□□□□ 0.28
LRMDA-205ENST00000488759 TSPY4P0CV99 314 aa16.81■□□□□ 0.28
LRMDA-205ENST00000488759 TSPY10P0CW01 314 aa16.81■□□□□ 0.28
LRMDA-205ENST00000488759 RTEL1-TNFRSF6BF6WH68 1400 aa16.8■□□□□ 0.28
LRMDA-205ENST00000488759 NCOA1Q15788 1441 aa16.79■□□□□ 0.28
LRMDA-205ENST00000488759 POLR1AO95602 1720 aaPredicted RBP16.79■□□□□ 0.28
LRMDA-205ENST00000488759 CFAP65Q6ZU64 1925 aaKnown RBP16.78■□□□□ 0.28
LRMDA-205ENST00000488759 DHX29Q7Z478 1369 aaKnown RBP16.77■□□□□ 0.28
LRMDA-205ENST00000488759 CROCC2H7BZ55 1655 aa16.77■□□□□ 0.28
LRMDA-205ENST00000488759 CEP152O94986 1710 aa16.76■□□□□ 0.27
LRMDA-205ENST00000488759 WASHC2CQ9Y4E1 1318 aa16.76■□□□□ 0.27
LRMDA-205ENST00000488759 PTPRTO14522 1441 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms