RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 MYO5CQ9NQX4 1742 aa25.37■■□□□ 1.65
CTDSP1-209ENST00000488627 POGZQ7Z3K3 1410 aa25.36■■□□□ 1.65
CTDSP1-209ENST00000488627 GPATCH8Q9UKJ3 1502 aaKnown RBP25.35■■□□□ 1.65
CTDSP1-209ENST00000488627 RICTORQ6R327 1708 aa25.33■■□□□ 1.65
CTDSP1-209ENST00000488627 AFAP1Q8N556 730 aa25.32■■□□□ 1.64
CTDSP1-209ENST00000488627 ZMYM4Q5VZL5 1548 aa25.31■■□□□ 1.64
CTDSP1-209ENST00000488627 YEATS2Q9ULM3 1422 aa25.29■■□□□ 1.64
CTDSP1-209ENST00000488627 CDC42BPBQ9Y5S2 1711 aa25.29■■□□□ 1.64
CTDSP1-209ENST00000488627 PREX2Q70Z35 1606 aa25.29■■□□□ 1.64
CTDSP1-209ENST00000488627 CCNB3Q8WWL7 1395 aa25.29■■□□□ 1.64
CTDSP1-209ENST00000488627 MAGI2Q86UL8 1455 aa25.28■■□□□ 1.64
CTDSP1-209ENST00000488627 ARHGEF12Q9NZN5 1544 aa25.28■■□□□ 1.64
CTDSP1-209ENST00000488627 EHBP1L1Q8N3D4 1523 aa25.27■■□□□ 1.64
CTDSP1-209ENST00000488627 CFDP1Q9UEE9 299 aaPredicted RBP25.27■■□□□ 1.64
CTDSP1-209ENST00000488627 ZNF777Q9ULD5 760 aaPredicted RBP25.25■■□□□ 1.63
CTDSP1-209ENST00000488627 TRAPPC8Q9Y2L5 1435 aa25.25■■□□□ 1.63
CTDSP1-209ENST00000488627 ZNF518AQ6AHZ1 1483 aa25.25■■□□□ 1.63
CTDSP1-209ENST00000488627 TIAM1Q13009 1591 aa25.24■■□□□ 1.63
CTDSP1-209ENST00000488627 KANK4Q5T7N3 995 aaPredicted RBP25.24■■□□□ 1.63
CTDSP1-209ENST00000488627 CDC42BPAQ5VT25 1732 aa25.23■■□□□ 1.63
CTDSP1-209ENST00000488627 ARHGEF40Q8TER5 1519 aa25.23■■□□□ 1.63
CTDSP1-209ENST00000488627 ABCC1P33527 1531 aa25.22■■□□□ 1.63
CTDSP1-209ENST00000488627 MAP3K1Q13233 1512 aa25.22■■□□□ 1.63
CTDSP1-209ENST00000488627 ZFYVE16Q7Z3T8 1539 aa25.22■■□□□ 1.63
CTDSP1-209ENST00000488627 LRRC9Q6ZRR7 1453 aa25.21■■□□□ 1.63
CTDSP1-209ENST00000488627 HNRNPMP52272 730 aaKnown RBP eCLIP25.2■■□□□ 1.62
CTDSP1-209ENST00000488627 KDM5CP41229 1560 aa25.19■■□□□ 1.62
CTDSP1-209ENST00000488627 ARID4BQ4LE39 1312 aaPredicted RBP25.19■■□□□ 1.62
CTDSP1-209ENST00000488627 NCOA2Q15596 1464 aa25.19■■□□□ 1.62
CTDSP1-209ENST00000488627 KIAA1107Q9UPP5 1409 aa25.19■■□□□ 1.62
CTDSP1-209ENST00000488627 ZNF644Q9H582 1327 aaPredicted RBP25.18■■□□□ 1.62
CTDSP1-209ENST00000488627 SAMD9LQ8IVG5 1584 aa25.18■■□□□ 1.62
CTDSP1-209ENST00000488627 ATP10AO60312 1499 aa25.16■■□□□ 1.62
CTDSP1-209ENST00000488627 MLH3Q9UHC1 1453 aa25.16■■□□□ 1.62
CTDSP1-209ENST00000488627 PLEKHH2Q8IVE3 1493 aa25.13■■□□□ 1.61
CTDSP1-209ENST00000488627 SYCP2Q9BX26 1530 aa25.12■■□□□ 1.61
CTDSP1-209ENST00000488627 C9orf84Q5VXU9 1444 aa25.11■■□□□ 1.61
CTDSP1-209ENST00000488627 MYT1LQ9UL68 1186 aa25.1■■□□□ 1.61
CTDSP1-209ENST00000488627 ITSN2Q9NZM3 1697 aa25.1■■□□□ 1.61
CTDSP1-209ENST00000488627 ADAMTSL3P82987 1691 aa25.09■■□□□ 1.61
CTDSP1-209ENST00000488627 MBD5Q9P267 1494 aa25.09■■□□□ 1.61
CTDSP1-209ENST00000488627 SUPT6HQ7KZ85 1726 aaKnown RBP25.08■■□□□ 1.61
CTDSP1-209ENST00000488627 SIGLEC1Q9BZZ2 1709 aa25.08■■□□□ 1.61
CTDSP1-209ENST00000488627 HECW2Q9P2P5 1572 aa25.07■■□□□ 1.6
CTDSP1-209ENST00000488627 APLP2Q06481 763 aa25.07■■□□□ 1.6
CTDSP1-209ENST00000488627 SPAG9O60271 1321 aaKnown RBP25.07■■□□□ 1.6
CTDSP1-209ENST00000488627 BCORL1Q5H9F3 1711 aa25.06■■□□□ 1.6
CTDSP1-209ENST00000488627 MLECQ14165 292 aa25.04■■□□□ 1.6
CTDSP1-209ENST00000488627 DIP2CQ9Y2E4 1556 aa25.04■■□□□ 1.6
CTDSP1-209ENST00000488627 PTPRMP28827 1452 aa25.02■■□□□ 1.6
CTDSP1-209ENST00000488627 KIDINS220Q9ULH0 1771 aa25■■□□□ 1.59
CTDSP1-209ENST00000488627 ABCA6Q8N139 1617 aa25■■□□□ 1.59
CTDSP1-209ENST00000488627 REREQ9P2R6 1566 aa24.99■■□□□ 1.59
CTDSP1-209ENST00000488627 CAMSAP2Q08AD1 1489 aa24.98■■□□□ 1.59
CTDSP1-209ENST00000488627 RSPH4AQ5TD94 716 aa24.98■■□□□ 1.59
CTDSP1-209ENST00000488627 MYOM3Q5VTT5 1437 aa24.97■■□□□ 1.59
CTDSP1-209ENST00000488627 MADDQ8WXG6 1647 aa24.97■■□□□ 1.59
CTDSP1-209ENST00000488627 MIA2Q96PC5 1412 aa24.95■■□□□ 1.59
CTDSP1-209ENST00000488627 AGLP35573 1532 aa24.95■■□□□ 1.58
CTDSP1-209ENST00000488627 ATP7AQ04656 1500 aa24.94■■□□□ 1.58
CTDSP1-209ENST00000488627 RTEL1-TNFRSF6BF6WH68 1400 aa24.94■■□□□ 1.58
CTDSP1-209ENST00000488627 INO80Q9ULG1 1556 aaPredicted RBP24.92■■□□□ 1.58
CTDSP1-209ENST00000488627 CCDC141Q6ZP82 1450 aa24.91■■□□□ 1.58
CTDSP1-209ENST00000488627 A2MP01023 1474 aa24.88■■□□□ 1.57
CTDSP1-209ENST00000488627 ARHGEF5Q12774 1597 aa24.86■■□□□ 1.57
CTDSP1-209ENST00000488627 TSPY4P0CV99 314 aa24.86■■□□□ 1.57
CTDSP1-209ENST00000488627 TSPY10P0CW01 314 aa24.86■■□□□ 1.57
CTDSP1-209ENST00000488627 RIMS1Q86UR5 1692 aaKnown RBP24.85■■□□□ 1.57
CTDSP1-209ENST00000488627 DHX29Q7Z478 1369 aaKnown RBP24.83■■□□□ 1.57
CTDSP1-209ENST00000488627 CEBPAP49715 358 aaPredicted RBP24.83■■□□□ 1.57
CTDSP1-209ENST00000488627 PLXNC1O60486 1568 aa24.83■■□□□ 1.57
CTDSP1-209ENST00000488627 PLPPR3Q6T4P5 718 aa24.82■■□□□ 1.56
CTDSP1-209ENST00000488627 FGD6Q6ZV73 1430 aa24.82■■□□□ 1.56
CTDSP1-209ENST00000488627 TCOF1Q13428 1488 aaKnown RBP24.77■■□□□ 1.56
CTDSP1-209ENST00000488627 FER1L4A9Z1Z3 1794 aa24.77■■□□□ 1.56
CTDSP1-209ENST00000488627 ABCC5O15440 1437 aa24.77■■□□□ 1.56
CTDSP1-209ENST00000488627 GGT6Q6P531 493 aa24.76■■□□□ 1.55
CTDSP1-209ENST00000488627 ESF1Q9H501 851 aaKnown RBP24.75■■□□□ 1.55
CTDSP1-209ENST00000488627 PPP6R1Q9UPN7 881 aa24.74■■□□□ 1.55
CTDSP1-209ENST00000488627 PTPN23Q9H3S7 1636 aa24.74■■□□□ 1.55
CTDSP1-209ENST00000488627 CNTLNQ9NXG0 1405 aa24.73■■□□□ 1.55
CTDSP1-209ENST00000488627 ADGBQ8N7X0 1667 aa24.72■■□□□ 1.55
CTDSP1-209ENST00000488627 MAST1Q9Y2H9 1570 aa24.72■■□□□ 1.55
CTDSP1-209ENST00000488627 KIF3BO15066 747 aa24.72■■□□□ 1.55
CTDSP1-209ENST00000488627 LMTK3Q96Q04 1460 aa24.71■■□□□ 1.55
CTDSP1-209ENST00000488627 ZMYM3Q14202 1370 aa24.7■■□□□ 1.55
CTDSP1-209ENST00000488627 PPARGC1BQ86YN6 1023 aaKnown RBP24.69■■□□□ 1.54
CTDSP1-209ENST00000488627 DAPK1P53355 1430 aa24.69■■□□□ 1.54
CTDSP1-209ENST00000488627 SHANK2Q9UPX8 1470 aa24.66■■□□□ 1.54
CTDSP1-209ENST00000488627 FAM50AQ14320 339 aaKnown RBP24.65■■□□□ 1.54
CTDSP1-209ENST00000488627 HSPA2P54652 639 aa24.64■■□□□ 1.54
CTDSP1-209ENST00000488627 RRP7BPQ9NSQ0 103 aa24.63■■□□□ 1.53
CTDSP1-209ENST00000488627 CHIC2Q9UKJ5 165 aa24.62■■□□□ 1.53
CTDSP1-209ENST00000488627 DNMT1P26358 1616 aaKnown RBP24.61■■□□□ 1.53
CTDSP1-209ENST00000488627 KIF15Q9NS87 1388 aa24.61■■□□□ 1.53
CTDSP1-209ENST00000488627 C3P01024 1663 aa24.6■■□□□ 1.53
CTDSP1-209ENST00000488627 DUOX2Q9NRD8 1548 aa24.58■■□□□ 1.53
CTDSP1-209ENST00000488627 NPATQ14207 1427 aa24.58■■□□□ 1.53
CTDSP1-209ENST00000488627 NCOA1Q15788 1441 aa24.58■■□□□ 1.53
CTDSP1-209ENST00000488627 WASHC2CQ9Y4E1 1318 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms