RNA–Protein interactions for RNA: ENST00000488601.6

POLR1C-208, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 2

Gene POLR1C, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-208ENST00000488601 SETD1BQ9UPS6 1966 aaKnown RBP12.39□□□□□ -0.43
POLR1C-208ENST00000488601 KDM5BQ9UGL1 1544 aa12.39□□□□□ -0.43
POLR1C-208ENST00000488601 KIAA0556O60303 1618 aa12.37□□□□□ -0.43
POLR1C-208ENST00000488601 PTPRKQ15262 1439 aa12.37□□□□□ -0.43
POLR1C-208ENST00000488601 PHLDB1Q86UU1 1377 aa12.36□□□□□ -0.43
POLR1C-208ENST00000488601 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.36□□□□□ -0.43
POLR1C-208ENST00000488601 ALKQ9UM73 1620 aa12.36□□□□□ -0.43
POLR1C-208ENST00000488601 CCDC88BA6NC98 1476 aa12.35□□□□□ -0.43
POLR1C-208ENST00000488601 WDR7Q9Y4E6 1490 aa12.35□□□□□ -0.43
POLR1C-208ENST00000488601 FER1L4A9Z1Z3 1794 aa12.34□□□□□ -0.43
POLR1C-208ENST00000488601 FANCAO15360 1455 aa12.34□□□□□ -0.43
POLR1C-208ENST00000488601 TTBK1Q5TCY1 1321 aaPredicted RBP12.33□□□□□ -0.44
POLR1C-208ENST00000488601 CUX1P39880 1505 aa12.32□□□□□ -0.44
POLR1C-208ENST00000488601 UACAQ9BZF9 1416 aa12.32□□□□□ -0.44
POLR1C-208ENST00000488601 TRIM52Q96A61 297 aa12.32□□□□□ -0.44
POLR1C-208ENST00000488601 MLECQ14165 292 aa12.3□□□□□ -0.44
POLR1C-208ENST00000488601 ARHGEF40Q8TER5 1519 aa12.3□□□□□ -0.44
POLR1C-208ENST00000488601 TNIKQ9UKE5 1360 aa12.3□□□□□ -0.44
POLR1C-208ENST00000488601 NCKAP5LQ9HCH0 1330 aa12.28□□□□□ -0.44
POLR1C-208ENST00000488601 ATF5Q9Y2D1 282 aaPredicted RBP12.27□□□□□ -0.45
POLR1C-208ENST00000488601 ZCCHC11Q5TAX3 1644 aaKnown RBP12.26□□□□□ -0.45
POLR1C-208ENST00000488601 CPS1P31327 1500 aa12.26□□□□□ -0.45
POLR1C-208ENST00000488601 FKBP8Q14318 412 aa12.25□□□□□ -0.45
POLR1C-208ENST00000488601 KCNH8Q96L42 1107 aa12.25□□□□□ -0.45
POLR1C-208ENST00000488601 FRMPD1Q5SYB0 1578 aa12.25□□□□□ -0.45
POLR1C-208ENST00000488601 LRP5O75197 1615 aa12.24□□□□□ -0.45
POLR1C-208ENST00000488601 ARHGEF12Q9NZN5 1544 aa12.24□□□□□ -0.45
POLR1C-208ENST00000488601 U3KPZ7 1027 aaPredicted RBP12.24□□□□□ -0.45
POLR1C-208ENST00000488601 CAMSAP1Q5T5Y3 1602 aa12.23□□□□□ -0.45
POLR1C-208ENST00000488601 SIGLEC1Q9BZZ2 1709 aa12.23□□□□□ -0.45
POLR1C-208ENST00000488601 AKNAQ7Z591 1439 aa12.22□□□□□ -0.45
POLR1C-208ENST00000488601 PKD2Q13563 968 aa12.22□□□□□ -0.45
POLR1C-208ENST00000488601 CEP350Q5VT06 3117 aa12.21□□□□□ -0.46
POLR1C-208ENST00000488601 ERICH3Q5RHP9 1530 aa12.21□□□□□ -0.46
POLR1C-208ENST00000488601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.2□□□□□ -0.46
POLR1C-208ENST00000488601 HNRNPUL2Q1KMD3 747 aaKnown RBP12.2□□□□□ -0.46
POLR1C-208ENST00000488601 SAMD1Q6SPF0 538 aaPredicted RBP12.19□□□□□ -0.46
POLR1C-208ENST00000488601 LRRC7Q96NW7 1537 aa12.19□□□□□ -0.46
POLR1C-208ENST00000488601 CDK12Q9NYV4 1490 aaPredicted RBP12.19□□□□□ -0.46
POLR1C-208ENST00000488601 C1QTNF8P60827 252 aa12.18□□□□□ -0.46
POLR1C-208ENST00000488601 RXRBP28702 533 aa12.17□□□□□ -0.46
POLR1C-208ENST00000488601 ZNF772Q68DY9 489 aaPredicted RBP12.16□□□□□ -0.46
POLR1C-208ENST00000488601 NEO1Q92859 1461 aa12.15□□□□□ -0.46
POLR1C-208ENST00000488601 CARMIL2Q6F5E8 1435 aa12.15□□□□□ -0.46
POLR1C-208ENST00000488601 TRAPPC8Q9Y2L5 1435 aa12.15□□□□□ -0.46
POLR1C-208ENST00000488601 SHANK2Q9UPX8 1470 aa12.14□□□□□ -0.47
POLR1C-208ENST00000488601 TCOF1Q13428 1488 aaKnown RBP12.12□□□□□ -0.47
POLR1C-208ENST00000488601 PLA2R1Q13018 1463 aa12.11□□□□□ -0.47
POLR1C-208ENST00000488601 RAPGEF6Q8TEU7 1601 aa12.11□□□□□ -0.47
POLR1C-208ENST00000488601 RTN4Q9NQC3 1192 aaKnown RBP12.09□□□□□ -0.47
POLR1C-208ENST00000488601 RAPGEF2Q9Y4G8 1499 aa12.08□□□□□ -0.48
POLR1C-208ENST00000488601 FHOD3Q2V2M9 1422 aa12.07□□□□□ -0.48
POLR1C-208ENST00000488601 AMER1Q5JTC6 1135 aaPredicted RBP12.06□□□□□ -0.48
POLR1C-208ENST00000488601 ZNF784Q8NCA9 323 aaPredicted RBP12.04□□□□□ -0.48
POLR1C-208ENST00000488601 EFCAB5A4FU69 1503 aa12.04□□□□□ -0.48
POLR1C-208ENST00000488601 ZFYVE16Q7Z3T8 1539 aa12.04□□□□□ -0.48
POLR1C-208ENST00000488601 DENND4BO75064 1496 aaPredicted RBP12.03□□□□□ -0.48
POLR1C-208ENST00000488601 C3P01024 1663 aa12.03□□□□□ -0.48
POLR1C-208ENST00000488601 MAGI2Q86UL8 1455 aa12.02□□□□□ -0.48
POLR1C-208ENST00000488601 RICTORQ6R327 1708 aa12.02□□□□□ -0.49
POLR1C-208ENST00000488601 NUTM2BA6NNL0 878 aaPredicted RBP12.01□□□□□ -0.49
POLR1C-208ENST00000488601 NUTM2EB1AL46 878 aaPredicted RBP12.01□□□□□ -0.49
POLR1C-208ENST00000488601 NUTM2DQ5VT03 806 aaPredicted RBP12.01□□□□□ -0.49
POLR1C-208ENST00000488601 NUTM2AQ8IVF1 878 aaPredicted RBP12.01□□□□□ -0.49
POLR1C-208ENST00000488601 FAM135BQ49AJ0 1406 aa12.01□□□□□ -0.49
POLR1C-208ENST00000488601 ZMYM4Q5VZL5 1548 aa12.01□□□□□ -0.49
POLR1C-208ENST00000488601 ATAD2Q6PL18 1390 aa12□□□□□ -0.49
POLR1C-208ENST00000488601 WRNQ14191 1432 aaPredicted RBP eCLIP11.99□□□□□ -0.49
POLR1C-208ENST00000488601 NHSL1Q5SYE7 1610 aa11.99□□□□□ -0.49
POLR1C-208ENST00000488601 RNF17Q9BXT8 1623 aaKnown RBP11.98□□□□□ -0.49
POLR1C-208ENST00000488601 CCDC125Q86Z20 511 aa11.98□□□□□ -0.49
POLR1C-208ENST00000488601 RGS12O14924 1447 aa11.97□□□□□ -0.49
POLR1C-208ENST00000488601 CAPN15O75808 1086 aa11.97□□□□□ -0.49
POLR1C-208ENST00000488601 ZNF219Q9P2Y4 722 aaPredicted RBP11.97□□□□□ -0.49
POLR1C-208ENST00000488601 ABCA9Q8IUA7 1624 aa11.96□□□□□ -0.5
POLR1C-208ENST00000488601 PRELPP51888 382 aa11.95□□□□□ -0.5
POLR1C-208ENST00000488601 ATP10AO60312 1499 aa11.95□□□□□ -0.5
POLR1C-208ENST00000488601 VWDEQ8N2E2 1590 aa11.94□□□□□ -0.5
POLR1C-208ENST00000488601 HRCP23327 699 aa11.94□□□□□ -0.5
POLR1C-208ENST00000488601 APLP2Q06481 763 aa11.94□□□□□ -0.5
POLR1C-208ENST00000488601 JCADQ9P266 1359 aa11.93□□□□□ -0.5
POLR1C-208ENST00000488601 NPATQ14207 1427 aa11.93□□□□□ -0.5
POLR1C-208ENST00000488601 C9orf84Q5VXU9 1444 aa11.92□□□□□ -0.5
POLR1C-208ENST00000488601 DISP1Q96F81 1524 aa11.91□□□□□ -0.5
POLR1C-208ENST00000488601 MEX3CQ5U5Q3 659 aaKnown RBP11.91□□□□□ -0.5
POLR1C-208ENST00000488601 LRP6O75581 1613 aa11.9□□□□□ -0.5
POLR1C-208ENST00000488601 EP400Q96L91 3159 aa11.9□□□□□ -0.5
POLR1C-208ENST00000488601 RBM6P78332 1123 aaKnown RBP11.87□□□□□ -0.51
POLR1C-208ENST00000488601 ESF1Q9H501 851 aaKnown RBP11.87□□□□□ -0.51
POLR1C-208ENST00000488601 SPATA31A6Q5VVP1 1343 aa11.86□□□□□ -0.51
POLR1C-208ENST00000488601 HECW1Q76N89 1606 aa11.86□□□□□ -0.51
POLR1C-208ENST00000488601 ZNF142P52746 1687 aaPredicted RBP11.85□□□□□ -0.51
POLR1C-208ENST00000488601 CDK13Q14004 1512 aaKnown RBP11.84□□□□□ -0.51
POLR1C-208ENST00000488601 NEURL4Q96JN8 1562 aa11.83□□□□□ -0.52
POLR1C-208ENST00000488601 SUPT6HQ7KZ85 1726 aaKnown RBP11.83□□□□□ -0.52
POLR1C-208ENST00000488601 BCL9LQ86UU0 1499 aa11.83□□□□□ -0.52
POLR1C-208ENST00000488601 CEP170BQ9Y4F5 1589 aaPredicted RBP11.82□□□□□ -0.52
POLR1C-208ENST00000488601 PSDA5PKW4 1024 aaPredicted RBP11.81□□□□□ -0.52
POLR1C-208ENST00000488601 SYNMO15061 1565 aa11.8□□□□□ -0.52
POLR1C-208ENST00000488601 CNTLNQ9NXG0 1405 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms