RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 RAPGEF6Q8TEU7 1601 aa19.77■□□□□ 0.76
RER1-207ENST00000488353 PLB1Q6P1J6 1458 aa19.76■□□□□ 0.75
RER1-207ENST00000488353 TONSLQ96HA7 1378 aa19.75■□□□□ 0.75
RER1-207ENST00000488353 NAIPQ13075 1403 aa19.75■□□□□ 0.75
RER1-207ENST00000488353 RRP7BPQ9NSQ0 103 aa19.75■□□□□ 0.75
RER1-207ENST00000488353 TCOF1Q13428 1488 aaKnown RBP19.72■□□□□ 0.75
RER1-207ENST00000488353 CARMIL2Q6F5E8 1435 aa19.7■□□□□ 0.74
RER1-207ENST00000488353 PRG4Q92954 1404 aaPredicted RBP19.69■□□□□ 0.74
RER1-207ENST00000488353 MIA2Q96PC5 1412 aa19.68■□□□□ 0.74
RER1-207ENST00000488353 UACAQ9BZF9 1416 aa19.68■□□□□ 0.74
RER1-207ENST00000488353 ZNF644Q9H582 1327 aaPredicted RBP19.67■□□□□ 0.74
RER1-207ENST00000488353 ERICH6BQ5W0A0 696 aa19.65■□□□□ 0.74
RER1-207ENST00000488353 PRKCSHP14314 528 aaPredicted RBP19.62■□□□□ 0.73
RER1-207ENST00000488353 DEKP35659 375 aaKnown RBP19.62■□□□□ 0.73
RER1-207ENST00000488353 TROQ12816 1431 aaPredicted RBP19.62■□□□□ 0.73
RER1-207ENST00000488353 KDM6BO15054 1643 aa19.61■□□□□ 0.73
RER1-207ENST00000488353 DAPK1P53355 1430 aa19.58■□□□□ 0.73
RER1-207ENST00000488353 KIF14Q15058 1648 aa19.58■□□□□ 0.72
RER1-207ENST00000488353 GCC2Q8IWJ2 1684 aa19.58■□□□□ 0.72
RER1-207ENST00000488353 HNRNPUQ00839 825 aaKnown RBP eCLIP19.57■□□□□ 0.72
RER1-207ENST00000488353 ZNF777Q9ULD5 760 aaPredicted RBP19.57■□□□□ 0.72
RER1-207ENST00000488353 CHD1O14646 1710 aa19.56■□□□□ 0.72
RER1-207ENST00000488353 PPP4R2Q9NY27 417 aa19.56■□□□□ 0.72
RER1-207ENST00000488353 CFDP1Q9UEE9 299 aaPredicted RBP19.56■□□□□ 0.72
RER1-207ENST00000488353 ABCC5O15440 1437 aa19.56■□□□□ 0.72
RER1-207ENST00000488353 ABCA8O94911 1581 aa19.55■□□□□ 0.72
RER1-207ENST00000488353 IRX6P78412 446 aaPredicted RBP19.55■□□□□ 0.72
RER1-207ENST00000488353 AKNAQ7Z591 1439 aa19.54■□□□□ 0.72
RER1-207ENST00000488353 GPATCH8Q9UKJ3 1502 aaKnown RBP19.53■□□□□ 0.72
RER1-207ENST00000488353 ATP10BO94823 1461 aa19.53■□□□□ 0.72
RER1-207ENST00000488353 DNMT1P26358 1616 aaKnown RBP19.52■□□□□ 0.72
RER1-207ENST00000488353 PLEKHD1A6NEE1 506 aa19.52■□□□□ 0.72
RER1-207ENST00000488353 PTPRGP23470 1445 aa19.52■□□□□ 0.71
RER1-207ENST00000488353 DENND4BO75064 1496 aaPredicted RBP19.51■□□□□ 0.71
RER1-207ENST00000488353 KDM5BQ9UGL1 1544 aa19.51■□□□□ 0.71
RER1-207ENST00000488353 CAMSAP2Q08AD1 1489 aa19.51■□□□□ 0.71
RER1-207ENST00000488353 HSPA5P11021 654 aaKnown RBP19.49■□□□□ 0.71
RER1-207ENST00000488353 FOXD1Q16676 465 aa19.49■□□□□ 0.71
RER1-207ENST00000488353 ADCY10Q96PN6 1610 aa19.48■□□□□ 0.71
RER1-207ENST00000488353 MPHOSPH9Q99550 1183 aa19.48■□□□□ 0.71
RER1-207ENST00000488353 ROCK1Q13464 1354 aa19.48■□□□□ 0.71
RER1-207ENST00000488353 ITSN2Q9NZM3 1697 aa19.47■□□□□ 0.71
RER1-207ENST00000488353 NOP58Q9Y2X3 529 aaKnown RBP19.45■□□□□ 0.7
RER1-207ENST00000488353 WASHC2AQ641Q2 1341 aa19.45■□□□□ 0.7
RER1-207ENST00000488353 ERCC6L2Q5T890 1561 aa19.42■□□□□ 0.7
RER1-207ENST00000488353 L3MBTL2Q969R5 705 aa19.42■□□□□ 0.7
RER1-207ENST00000488353 ABCC10Q5T3U5 1492 aa19.42■□□□□ 0.7
RER1-207ENST00000488353 EIF4G2P78344 907 aaKnown RBP eCLIP19.41■□□□□ 0.7
RER1-207ENST00000488353 CDC42BPAQ5VT25 1732 aa19.4■□□□□ 0.7
RER1-207ENST00000488353 NCOA1Q15788 1441 aa19.39■□□□□ 0.69
RER1-207ENST00000488353 SHROOM2Q13796 1616 aa19.38■□□□□ 0.69
RER1-207ENST00000488353 SLC4A1APQ9BWU0 796 aaKnown RBP19.37■□□□□ 0.69
RER1-207ENST00000488353 NBR1Q14596 966 aa19.36■□□□□ 0.69
RER1-207ENST00000488353 B4GALNT3Q6L9W6 998 aa19.36■□□□□ 0.69
RER1-207ENST00000488353 C11orf95C9JLR9 678 aaPredicted RBP19.35■□□□□ 0.69
RER1-207ENST00000488353 CROCC2H7BZ55 1655 aa19.34■□□□□ 0.69
RER1-207ENST00000488353 CCDC184Q52MB2 194 aa19.34■□□□□ 0.69
RER1-207ENST00000488353 HNRNPMP52272 730 aaKnown RBP eCLIP19.33■□□□□ 0.694e-7■■■□□ 19.2
RER1-207ENST00000488353 ADGBQ8N7X0 1667 aa19.33■□□□□ 0.69
RER1-207ENST00000488353 PAK3O75914 559 aaPredicted RBP19.32■□□□□ 0.68
RER1-207ENST00000488353 ANKRD30AQ9BXX3 1397 aa19.32■□□□□ 0.68
RER1-207ENST00000488353 NBPF8Q3BBV2 869 aa19.31■□□□□ 0.68
RER1-207ENST00000488353 ANKRD30BQ9BXX2 1392 aa19.31■□□□□ 0.68
RER1-207ENST00000488353 ADGRL2O95490 1459 aa19.31■□□□□ 0.68
RER1-207ENST00000488353 C9orf84Q5VXU9 1444 aa19.29■□□□□ 0.68
RER1-207ENST00000488353 PZPP20742 1482 aa19.29■□□□□ 0.68
RER1-207ENST00000488353 CNTLNQ9NXG0 1405 aa19.28■□□□□ 0.68
RER1-207ENST00000488353 ZBED9Q6R2W3 1325 aa19.28■□□□□ 0.68
RER1-207ENST00000488353 ANO8Q9HCE9 1232 aaPredicted RBP19.28■□□□□ 0.68
RER1-207ENST00000488353 ANKRD50Q9ULJ7 1429 aa19.28■□□□□ 0.68
RER1-207ENST00000488353 TSPY4P0CV99 314 aa19.27■□□□□ 0.68
RER1-207ENST00000488353 TSPY10P0CW01 314 aa19.27■□□□□ 0.68
RER1-207ENST00000488353 RTL5Q5HYW3 569 aaPredicted RBP19.27■□□□□ 0.68
RER1-207ENST00000488353 FAM9BQ8IZU0 186 aa19.27■□□□□ 0.67
RER1-207ENST00000488353 ABCC2Q92887 1545 aa19.27■□□□□ 0.67
RER1-207ENST00000488353 CCDC7Q96M83 1385 aa19.26■□□□□ 0.67
RER1-207ENST00000488353 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
RER1-207ENST00000488353 CDC42BPBQ9Y5S2 1711 aa19.25■□□□□ 0.67
RER1-207ENST00000488353 ANP32AP39687 249 aaKnown RBP19.25■□□□□ 0.67
RER1-207ENST00000488353 IPO9Q96P70 1041 aaKnown RBP19.25■□□□□ 0.67
RER1-207ENST00000488353 RPRD2Q5VT52 1461 aaKnown RBP19.25■□□□□ 0.67
RER1-207ENST00000488353 TTC37Q6PGP7 1564 aa19.24■□□□□ 0.67
RER1-207ENST00000488353 SAMD9LQ8IVG5 1584 aa19.24■□□□□ 0.67
RER1-207ENST00000488353 PRKRIP1Q9H875 184 aaPredicted RBP19.24■□□□□ 0.67
RER1-207ENST00000488353 MBD5Q9P267 1494 aa19.23■□□□□ 0.67
RER1-207ENST00000488353 SHANK2Q9UPX8 1470 aa19.23■□□□□ 0.67
RER1-207ENST00000488353 PREX2Q70Z35 1606 aa19.23■□□□□ 0.67
RER1-207ENST00000488353 PKD2Q13563 968 aa19.23■□□□□ 0.67
RER1-207ENST00000488353 CNGB1Q14028 1251 aaPredicted RBP19.23■□□□□ 0.67
RER1-207ENST00000488353 MRS2Q9HD23 443 aa19.22■□□□□ 0.67
RER1-207ENST00000488353 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.21■□□□□ 0.67
RER1-207ENST00000488353 KIF15Q9NS87 1388 aa19.21■□□□□ 0.67
RER1-207ENST00000488353 ZBTB47Q9UFB7 747 aaPredicted RBP19.2■□□□□ 0.66
RER1-207ENST00000488353 NUP155O75694 1391 aa19.2■□□□□ 0.66
RER1-207ENST00000488353 TEX14Q8IWB6 1497 aa19.2■□□□□ 0.66
RER1-207ENST00000488353 ARHGAP5Q13017 1502 aa19.2■□□□□ 0.66
RER1-207ENST00000488353 KIF7Q2M1P5 1343 aa19.18■□□□□ 0.66
RER1-207ENST00000488353 CCDC141Q6ZP82 1450 aa19.18■□□□□ 0.66
RER1-207ENST00000488353 ARHGEF5Q12774 1597 aa19.18■□□□□ 0.66
RER1-207ENST00000488353 ZNF326Q5BKZ1 582 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms