RNA–Protein interactions for RNA: ENST00000488179.6

SSR2-212, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 5

Gene SSR2, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-212ENST00000488179 SCAPERQ9BY12 1400 aa13.38□□□□□ -0.27
SSR2-212ENST00000488179 CEP162Q5TB80 1403 aa13.36□□□□□ -0.27
SSR2-212ENST00000488179 PLPPR3Q6T4P5 718 aa13.36□□□□□ -0.27
SSR2-212ENST00000488179 ZNF777Q9ULD5 760 aaPredicted RBP13.35□□□□□ -0.27
SSR2-212ENST00000488179 CDC42BPBQ9Y5S2 1711 aa13.34□□□□□ -0.27
SSR2-212ENST00000488179 MLECQ14165 292 aa13.33□□□□□ -0.27
SSR2-212ENST00000488179 ARHGEF40Q8TER5 1519 aa13.32□□□□□ -0.28
SSR2-212ENST00000488179 AFAP1Q8N556 730 aa13.32□□□□□ -0.28
SSR2-212ENST00000488179 YEATS2Q9ULM3 1422 aa13.32□□□□□ -0.28
SSR2-212ENST00000488179 ZFYVE16Q7Z3T8 1539 aa13.32□□□□□ -0.28
SSR2-212ENST00000488179 POGZQ7Z3K3 1410 aa13.31□□□□□ -0.28
SSR2-212ENST00000488179 MTUS2Q5JR59 1369 aa13.31□□□□□ -0.28
SSR2-212ENST00000488179 CDC42BPAQ5VT25 1732 aa13.3□□□□□ -0.28
SSR2-212ENST00000488179 PREX2Q70Z35 1606 aa13.3□□□□□ -0.28
SSR2-212ENST00000488179 BCORL1Q5H9F3 1711 aa13.3□□□□□ -0.28
SSR2-212ENST00000488179 ZMYM4Q5VZL5 1548 aa13.29□□□□□ -0.28
SSR2-212ENST00000488179 ZNF518AQ6AHZ1 1483 aa13.28□□□□□ -0.28
SSR2-212ENST00000488179 MADDQ8WXG6 1647 aa13.28□□□□□ -0.28
SSR2-212ENST00000488179 ADAMTSL3P82987 1691 aa13.28□□□□□ -0.28
SSR2-212ENST00000488179 MAGI2Q86UL8 1455 aa13.27□□□□□ -0.29
SSR2-212ENST00000488179 RIMS1Q86UR5 1692 aaKnown RBP13.26□□□□□ -0.29
SSR2-212ENST00000488179 CFDP1Q9UEE9 299 aaPredicted RBP13.26□□□□□ -0.29
SSR2-212ENST00000488179 HECW2Q9P2P5 1572 aa13.26□□□□□ -0.29
SSR2-212ENST00000488179 PTPRMP28827 1452 aa13.26□□□□□ -0.29
SSR2-212ENST00000488179 CCNB3Q8WWL7 1395 aa13.26□□□□□ -0.29
SSR2-212ENST00000488179 SIGLEC1Q9BZZ2 1709 aa13.25□□□□□ -0.29
SSR2-212ENST00000488179 HNRNPMP52272 730 aaKnown RBP eCLIP13.25□□□□□ -0.29
SSR2-212ENST00000488179 ATP10AO60312 1499 aa13.24□□□□□ -0.29
SSR2-212ENST00000488179 TRAPPC8Q9Y2L5 1435 aa13.23□□□□□ -0.29
SSR2-212ENST00000488179 ITSN2Q9NZM3 1697 aa13.23□□□□□ -0.29
SSR2-212ENST00000488179 ABCC1P33527 1531 aa13.23□□□□□ -0.29
SSR2-212ENST00000488179 GPATCH8Q9UKJ3 1502 aaKnown RBP13.23□□□□□ -0.29
SSR2-212ENST00000488179 ARHGEF12Q9NZN5 1544 aa13.22□□□□□ -0.29
SSR2-212ENST00000488179 FER1L4A9Z1Z3 1794 aa13.22□□□□□ -0.29
SSR2-212ENST00000488179 C9orf84Q5VXU9 1444 aa13.22□□□□□ -0.29
SSR2-212ENST00000488179 KDM5CP41229 1560 aa13.21□□□□□ -0.29
SSR2-212ENST00000488179 SAMD9LQ8IVG5 1584 aa13.21□□□□□ -0.29
SSR2-212ENST00000488179 EHBP1L1Q8N3D4 1523 aa13.21□□□□□ -0.3
SSR2-212ENST00000488179 SYCP2Q9BX26 1530 aa13.21□□□□□ -0.3
SSR2-212ENST00000488179 ABCA6Q8N139 1617 aa13.19□□□□□ -0.3
SSR2-212ENST00000488179 SPAG9O60271 1321 aaKnown RBP13.19□□□□□ -0.3
SSR2-212ENST00000488179 ZNF644Q9H582 1327 aaPredicted RBP13.19□□□□□ -0.3
SSR2-212ENST00000488179 ESF1Q9H501 851 aaKnown RBP13.19□□□□□ -0.3
SSR2-212ENST00000488179 DIP2CQ9Y2E4 1556 aa13.18□□□□□ -0.3
SSR2-212ENST00000488179 VPS8Q8N3P4 1428 aa13.18□□□□□ -0.3
SSR2-212ENST00000488179 KIDINS220Q9ULH0 1771 aa13.17□□□□□ -0.3
SSR2-212ENST00000488179 SUPT6HQ7KZ85 1726 aaKnown RBP13.17□□□□□ -0.3
SSR2-212ENST00000488179 TIAM1Q13009 1591 aa13.17□□□□□ -0.3
SSR2-212ENST00000488179 MLH3Q9UHC1 1453 aa13.17□□□□□ -0.3
SSR2-212ENST00000488179 CEBPAP49715 358 aaPredicted RBP13.16□□□□□ -0.3
SSR2-212ENST00000488179 APLP2Q06481 763 aa13.16□□□□□ -0.3
SSR2-212ENST00000488179 NCOA2Q15596 1464 aa13.14□□□□□ -0.31
SSR2-212ENST00000488179 PLEKHH2Q8IVE3 1493 aa13.14□□□□□ -0.31
SSR2-212ENST00000488179 HSPA2P54652 639 aa13.13□□□□□ -0.31
SSR2-212ENST00000488179 KANK4Q5T7N3 995 aaPredicted RBP13.13□□□□□ -0.31
SSR2-212ENST00000488179 KIAA1107Q9UPP5 1409 aa13.12□□□□□ -0.31
SSR2-212ENST00000488179 ATP7AQ04656 1500 aa13.11□□□□□ -0.31
SSR2-212ENST00000488179 LRRC9Q6ZRR7 1453 aa13.11□□□□□ -0.31
SSR2-212ENST00000488179 LMTK3Q96Q04 1460 aa13.1□□□□□ -0.31
SSR2-212ENST00000488179 GGT6Q6P531 493 aa13.1□□□□□ -0.31
SSR2-212ENST00000488179 REREQ9P2R6 1566 aa13.09□□□□□ -0.31
SSR2-212ENST00000488179 CAMSAP2Q08AD1 1489 aa13.08□□□□□ -0.31
SSR2-212ENST00000488179 SETD1BQ9UPS6 1966 aaKnown RBP13.08□□□□□ -0.32
SSR2-212ENST00000488179 INO80Q9ULG1 1556 aaPredicted RBP13.07□□□□□ -0.32
SSR2-212ENST00000488179 AGLP35573 1532 aa13.07□□□□□ -0.32
SSR2-212ENST00000488179 A2MP01023 1474 aa13.07□□□□□ -0.32
SSR2-212ENST00000488179 C3P01024 1663 aa13.06□□□□□ -0.32
SSR2-212ENST00000488179 TSPY4P0CV99 314 aa13.06□□□□□ -0.32
SSR2-212ENST00000488179 TSPY10P0CW01 314 aa13.06□□□□□ -0.32
SSR2-212ENST00000488179 MBD5Q9P267 1494 aa13.06□□□□□ -0.32
SSR2-212ENST00000488179 ADGBQ8N7X0 1667 aa13.05□□□□□ -0.32
SSR2-212ENST00000488179 PREX1Q8TCU6 1659 aa13.05□□□□□ -0.32
SSR2-212ENST00000488179 CCDC141Q6ZP82 1450 aa13.05□□□□□ -0.32
SSR2-212ENST00000488179 RSPH4AQ5TD94 716 aa13.03□□□□□ -0.32
SSR2-212ENST00000488179 CLTCQ00610 1675 aaKnown RBP13.03□□□□□ -0.32
SSR2-212ENST00000488179 MAP3K1Q13233 1512 aa13.03□□□□□ -0.32
SSR2-212ENST00000488179 KIF3BO15066 747 aa13.02□□□□□ -0.32
SSR2-212ENST00000488179 UHRF1BP1Q6BDS2 1440 aa13.02□□□□□ -0.32
SSR2-212ENST00000488179 ILDR1Q86SU0 546 aaPredicted RBP13.02□□□□□ -0.33
SSR2-212ENST00000488179 CNTLNQ9NXG0 1405 aa13.01□□□□□ -0.33
SSR2-212ENST00000488179 MYOM3Q5VTT5 1437 aa13.01□□□□□ -0.33
SSR2-212ENST00000488179 PLXNC1O60486 1568 aa13.01□□□□□ -0.33
SSR2-212ENST00000488179 RTEL1-TNFRSF6BF6WH68 1400 aa13□□□□□ -0.33
SSR2-212ENST00000488179 ZMYM3Q14202 1370 aa13□□□□□ -0.33
SSR2-212ENST00000488179 DHX29Q7Z478 1369 aaKnown RBP12.99□□□□□ -0.33
SSR2-212ENST00000488179 ARHGEF5Q12774 1597 aa12.98□□□□□ -0.33
SSR2-212ENST00000488179 MROH2AA6NES4 1674 aa12.97□□□□□ -0.33
SSR2-212ENST00000488179 MIA2Q96PC5 1412 aa12.96□□□□□ -0.33
SSR2-212ENST00000488179 WASHC2CQ9Y4E1 1318 aa12.96□□□□□ -0.33
SSR2-212ENST00000488179 PTPN23Q9H3S7 1636 aa12.95□□□□□ -0.34
SSR2-212ENST00000488179 CFAP65Q6ZU64 1925 aaKnown RBP12.95□□□□□ -0.34
SSR2-212ENST00000488179 PPARGC1BQ86YN6 1023 aaKnown RBP12.94□□□□□ -0.34
SSR2-212ENST00000488179 CHIC2Q9UKJ5 165 aa12.94□□□□□ -0.34
SSR2-212ENST00000488179 FAM50AQ14320 339 aaKnown RBP12.93□□□□□ -0.34
SSR2-212ENST00000488179 RRP7BPQ9NSQ0 103 aa12.93□□□□□ -0.34
SSR2-212ENST00000488179 PPP6R1Q9UPN7 881 aa12.93□□□□□ -0.34
SSR2-212ENST00000488179 STRCQ7RTU9 1775 aa12.93□□□□□ -0.34
SSR2-212ENST00000488179 DMRT2Q9Y5R5 561 aa12.92□□□□□ -0.34
SSR2-212ENST00000488179 NPATQ14207 1427 aa12.92□□□□□ -0.34
SSR2-212ENST00000488179 FGD6Q6ZV73 1430 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms