RNA–Protein interactions for RNA: ENST00000488179.6

SSR2-212, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 5

Gene SSR2, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-212ENST00000488179 NISCHQ9Y2I1 1504 aa20.39■□□□□ 0.85
SSR2-212ENST00000488179 CCDC180Q9P1Z9 1646 aa18.19■□□□□ 0.5
SSR2-212ENST00000488179 ABCC9O60706 1549 aa18.11■□□□□ 0.49
SSR2-212ENST00000488179 DCAF8L2P0C7V8 631 aa17.37■□□□□ 0.37
SSR2-212ENST00000488179 RB1CC1Q8TDY2 1594 aa17.26■□□□□ 0.35
SSR2-212ENST00000488179 NACADO15069 1562 aa17.15■□□□□ 0.34
SSR2-212ENST00000488179 PABPN1Q86U42 306 aaKnown RBP eCLIP16.94■□□□□ 0.3
SSR2-212ENST00000488179 UNC13AQ9UPW8 1703 aa16.92■□□□□ 0.3
SSR2-212ENST00000488179 ZCCHC6Q5VYS8 1495 aaKnown RBP16.91■□□□□ 0.3
SSR2-212ENST00000488179 MYO15BQ96JP2 1530 aa16.89■□□□□ 0.29
SSR2-212ENST00000488179 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
SSR2-212ENST00000488179 DCAF1Q9Y4B6 1507 aa16.77■□□□□ 0.28
SSR2-212ENST00000488179 BICRAQ9NZM4 1560 aa16.72■□□□□ 0.27
SSR2-212ENST00000488179 SCRIBQ14160 1630 aa16.7■□□□□ 0.26
SSR2-212ENST00000488179 SHROOM4Q9ULL8 1493 aa16.43■□□□□ 0.22
SSR2-212ENST00000488179 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
SSR2-212ENST00000488179 EIF4G1Q04637 1599 aaKnown RBP16.32■□□□□ 0.2
SSR2-212ENST00000488179 CECR2Q9BXF3 1484 aa16.26■□□□□ 0.19
SSR2-212ENST00000488179 SMARCA4P51532 1647 aa15.88■□□□□ 0.13
SSR2-212ENST00000488179 ATAD2BQ9ULI0 1458 aa15.83■□□□□ 0.13
SSR2-212ENST00000488179 BAZ1AQ9NRL2 1556 aaPredicted RBP15.82■□□□□ 0.12
SSR2-212ENST00000488179 NCAPD3P42695 1498 aa15.81■□□□□ 0.12
SSR2-212ENST00000488179 SMARCA2P51531 1590 aa15.8■□□□□ 0.12
SSR2-212ENST00000488179 MROH2BQ7Z745 1585 aa15.74■□□□□ 0.11
SSR2-212ENST00000488179 BAZ1BQ9UIG0 1483 aaKnown RBP15.74■□□□□ 0.11
SSR2-212ENST00000488179 HMGXB3Q12766 1538 aa15.72■□□□□ 0.11
SSR2-212ENST00000488179 ERCC6Q03468 1493 aa15.65■□□□□ 0.1
SSR2-212ENST00000488179 PEG3Q9GZU2 1588 aa15.65■□□□□ 0.1
SSR2-212ENST00000488179 WIZO95785 1651 aa15.61■□□□□ 0.09
SSR2-212ENST00000488179 NESP48681 1621 aa15.61■□□□□ 0.09
SSR2-212ENST00000488179 RSF1Q96T23 1441 aaPredicted RBP15.47■□□□□ 0.07
SSR2-212ENST00000488179 LAMC3Q9Y6N6 1575 aa15.47■□□□□ 0.07
SSR2-212ENST00000488179 CUX2O14529 1486 aa15.44■□□□□ 0.06
SSR2-212ENST00000488179 KIF21AQ7Z4S6 1674 aa15.42■□□□□ 0.06
SSR2-212ENST00000488179 PDS5BQ9NTI5 1447 aa15.4■□□□□ 0.06
SSR2-212ENST00000488179 CADPSQ9ULU8 1353 aa15.39■□□□□ 0.05
SSR2-212ENST00000488179 TOP2AP11388 1531 aaKnown RBP15.35■□□□□ 0.05
SSR2-212ENST00000488179 THOC2Q8NI27 1593 aaKnown RBP15.34■□□□□ 0.05
SSR2-212ENST00000488179 DNAJC5Q9H3Z4 198 aa15.26■□□□□ 0.03
SSR2-212ENST00000488179 FANCD2Q9BXW9 1451 aa15.24■□□□□ 0.03
SSR2-212ENST00000488179 CEP164Q9UPV0 1460 aa15.24■□□□□ 0.03
SSR2-212ENST00000488179 CFTRP13569 1480 aa15.23■□□□□ 0.03
SSR2-212ENST00000488179 MRC2Q9UBG0 1479 aa15.23■□□□□ 0.03
SSR2-212ENST00000488179 CCDC88BA6NC98 1476 aa15.21■□□□□ 0.02
SSR2-212ENST00000488179 WDR62O43379 1518 aa15.16■□□□□ 0.02
SSR2-212ENST00000488179 PRDM2Q13029 1718 aa15.15■□□□□ 0.02
SSR2-212ENST00000488179 SUPT5HO00267 1087 aaKnown RBP15.12■□□□□ 0.01
SSR2-212ENST00000488179 URB2Q14146 1524 aaKnown RBP15.08■□□□□ 0.01
SSR2-212ENST00000488179 TOPBP1Q92547 1522 aa14.95□□□□□ -0.02
SSR2-212ENST00000488179 ABCC8Q09428 1581 aa14.92□□□□□ -0.02
SSR2-212ENST00000488179 DNMBPQ6XZF7 1577 aa14.91□□□□□ -0.02
SSR2-212ENST00000488179 IFT140Q96RY7 1462 aa14.89□□□□□ -0.03
SSR2-212ENST00000488179 ZNF608Q9ULD9 1512 aaPredicted RBP14.89□□□□□ -0.03
SSR2-212ENST00000488179 OSCARQ8IYS5 282 aa14.86□□□□□ -0.03
SSR2-212ENST00000488179 POLA1P09884 1462 aaPredicted RBP14.82□□□□□ -0.04
SSR2-212ENST00000488179 TRIM41Q8WV44 630 aa14.82□□□□□ -0.04
SSR2-212ENST00000488179 EIF4G3O43432 1585 aaKnown RBP14.82□□□□□ -0.04
SSR2-212ENST00000488179 AQRO60306 1485 aaKnown RBP eCLIP14.8□□□□□ -0.04
SSR2-212ENST00000488179 RAD54L2Q9Y4B4 1467 aa14.8□□□□□ -0.04
SSR2-212ENST00000488179 TARBP1Q13395 1621 aaKnown RBP14.79□□□□□ -0.04
SSR2-212ENST00000488179 SOGA1O94964 1423 aa14.79□□□□□ -0.04
SSR2-212ENST00000488179 FBLN2P98095 1184 aa14.78□□□□□ -0.04
SSR2-212ENST00000488179 CUX1P39880 1505 aa14.78□□□□□ -0.04
SSR2-212ENST00000488179 FGD5Q6ZNL6 1462 aa14.77□□□□□ -0.04
SSR2-212ENST00000488179 TDRD9Q8NDG6 1382 aaKnown RBP14.76□□□□□ -0.05
SSR2-212ENST00000488179 CHD1O14646 1710 aa14.71□□□□□ -0.06
SSR2-212ENST00000488179 CHMP7Q8WUX9 453 aaPredicted RBP14.64□□□□□ -0.07
SSR2-212ENST00000488179 SNAPC4Q5SXM2 1469 aa14.64□□□□□ -0.07
SSR2-212ENST00000488179 WRNQ14191 1432 aaPredicted RBP eCLIP14.62□□□□□ -0.07
SSR2-212ENST00000488179 WDR97A6NE52 1622 aa14.61□□□□□ -0.07
SSR2-212ENST00000488179 RIMBP3CA6NJZ7 1639 aa14.61□□□□□ -0.07
SSR2-212ENST00000488179 RIMBP3BA6NNM3 1639 aa14.61□□□□□ -0.07
SSR2-212ENST00000488179 RIMBP3Q9UFD9 1639 aa14.61□□□□□ -0.07
SSR2-212ENST00000488179 GRIN2BQ13224 1484 aa14.61□□□□□ -0.07
SSR2-212ENST00000488179 GAPVD1Q14C86 1478 aa14.61□□□□□ -0.07
SSR2-212ENST00000488179 PBRM1Q86U86 1689 aa14.6□□□□□ -0.07
SSR2-212ENST00000488179 SYNJ1O43426 1573 aa14.59□□□□□ -0.07
SSR2-212ENST00000488179 TOP2BQ02880 1626 aa14.58□□□□□ -0.08
SSR2-212ENST00000488179 ARHGEF11O15085 1522 aa14.58□□□□□ -0.08
SSR2-212ENST00000488179 BIVM-ERCC5R4GMW8 1640 aa14.57□□□□□ -0.08
SSR2-212ENST00000488179 MAGI1Q96QZ7 1491 aaPredicted RBP14.57□□□□□ -0.08
SSR2-212ENST00000488179 ABCA10Q8WWZ4 1543 aa14.57□□□□□ -0.08
SSR2-212ENST00000488179 CYB5RLQ6IPT4 315 aa14.55□□□□□ -0.08
SSR2-212ENST00000488179 ABCA5Q8WWZ7 1642 aa14.53□□□□□ -0.08
SSR2-212ENST00000488179 SYNJ2O15056 1496 aa14.53□□□□□ -0.08
SSR2-212ENST00000488179 CLASP1Q7Z460 1538 aa14.45□□□□□ -0.1
SSR2-212ENST00000488179 ARAP1Q96P48 1450 aa14.43□□□□□ -0.1
SSR2-212ENST00000488179 GRIN2AQ12879 1464 aa14.42□□□□□ -0.1
SSR2-212ENST00000488179 ADAMTS12P58397 1594 aa14.42□□□□□ -0.1
SSR2-212ENST00000488179 ERICH3Q5RHP9 1530 aa14.4□□□□□ -0.1
SSR2-212ENST00000488179 FHAD1B1AJZ9 1412 aa14.4□□□□□ -0.1
SSR2-212ENST00000488179 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
SSR2-212ENST00000488179 CEP170Q5SW79 1584 aa14.36□□□□□ -0.11
SSR2-212ENST00000488179 KIF27Q86VH2 1401 aa14.33□□□□□ -0.12
SSR2-212ENST00000488179 NUP160Q12769 1436 aa14.32□□□□□ -0.12
SSR2-212ENST00000488179 ERCC6L2Q5T890 1561 aa14.3□□□□□ -0.12
SSR2-212ENST00000488179 IGF1RP08069 1367 aa14.28□□□□□ -0.12
SSR2-212ENST00000488179 JPH4Q96JJ6 628 aa14.27□□□□□ -0.13
SSR2-212ENST00000488179 CUL7Q14999 1698 aa14.25□□□□□ -0.13
SSR2-212ENST00000488179 PRG4Q92954 1404 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms