RNA–Protein interactions for RNA: ENST00000487662.1

DENND6A-206, Transcript of DENN domain containing 6A, humanhuman

TSL 2

Gene DENND6A, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND6A-206ENST00000487662 MAMSTRQ6ZN01 415 aa12.9□□□□□ -0.34
DENND6A-206ENST00000487662 TMC2Q8TDI7 906 aa12.9□□□□□ -0.34
DENND6A-206ENST00000487662 SCUBE2Q9NQ36 999 aa12.9□□□□□ -0.34
DENND6A-206ENST00000487662 LHX8Q68G74 356 aa12.89□□□□□ -0.35
DENND6A-206ENST00000487662 LARP6Q9BRS8 491 aaKnown RBP12.87□□□□□ -0.35
DENND6A-206ENST00000487662 NCKAP5LQ9HCH0 1330 aa12.87□□□□□ -0.35
DENND6A-206ENST00000487662 WDR70Q9NW82 654 aa12.86□□□□□ -0.35
DENND6A-206ENST00000487662 CRISPLD2Q9H0B8 497 aa12.85□□□□□ -0.35
DENND6A-206ENST00000487662 KDM2AQ9Y2K7 1162 aa12.85□□□□□ -0.35
DENND6A-206ENST00000487662 C2orf72A6NCS6 295 aa12.84□□□□□ -0.35
DENND6A-206ENST00000487662 TMEM92Q6UXU6 159 aa12.84□□□□□ -0.35
DENND6A-206ENST00000487662 GPHNQ9NQX3 736 aaPredicted RBP12.84□□□□□ -0.35
DENND6A-206ENST00000487662 SLAIN1Q8ND83 568 aa12.82□□□□□ -0.36
DENND6A-206ENST00000487662 DDX27Q96GQ7 796 aaKnown RBP12.81□□□□□ -0.36
DENND6A-206ENST00000487662 KIF3CO14782 793 aa12.78□□□□□ -0.36
DENND6A-206ENST00000487662 DSG2Q14126 1118 aa12.77□□□□□ -0.37
DENND6A-206ENST00000487662 MFSD10Q14728 455 aa12.77□□□□□ -0.37
DENND6A-206ENST00000487662 PPP1R15BQ5SWA1 713 aa12.77□□□□□ -0.37
DENND6A-206ENST00000487662 OTUD5Q96G74 571 aa12.77□□□□□ -0.37
DENND6A-206ENST00000487662 FOXK1P85037 733 aa12.75□□□□□ -0.37
DENND6A-206ENST00000487662 PLPP6Q8IY26 295 aa12.74□□□□□ -0.37
DENND6A-206ENST00000487662 E2F4Q16254 413 aa12.7□□□□□ -0.38
DENND6A-206ENST00000487662 P3H3Q8IVL6 736 aa12.64□□□□□ -0.39
DENND6A-206ENST00000487662 KCNV2Q8TDN2 545 aa12.62□□□□□ -0.39
DENND6A-206ENST00000487662 SNPHO15079 494 aa12.61□□□□□ -0.39
DENND6A-206ENST00000487662 CAMK2BQ13554 666 aa12.61□□□□□ -0.39
DENND6A-206ENST00000487662 UPF1Q92900 1129 aaKnown RBP eCLIP12.61□□□□□ -0.39
DENND6A-206ENST00000487662 DOK7Q18PE1 504 aa12.6□□□□□ -0.39
DENND6A-206ENST00000487662 ZNF710Q8N1W2 664 aa12.58□□□□□ -0.4
DENND6A-206ENST00000487662 EMILIN3Q9NT22 766 aa12.58□□□□□ -0.4
DENND6A-206ENST00000487662 RIMBP2O15034 1052 aa12.57□□□□□ -0.4
DENND6A-206ENST00000487662 HOXB3P14651 431 aaPredicted RBP12.56□□□□□ -0.4
DENND6A-206ENST00000487662 SLC34A2O95436 690 aa12.55□□□□□ -0.4
DENND6A-206ENST00000487662 MAP3K9P80192 1104 aa12.55□□□□□ -0.4
DENND6A-206ENST00000487662 DPYSL4O14531 572 aa12.54□□□□□ -0.4
DENND6A-206ENST00000487662 TBC1D12O60347 775 aa12.54□□□□□ -0.4
DENND6A-206ENST00000487662 ARHGEF1Q92888 912 aaKnown RBP12.54□□□□□ -0.4
DENND6A-206ENST00000487662 OXER1Q8TDS5 423 aa12.53□□□□□ -0.4
DENND6A-206ENST00000487662 PTCD2Q8WV60 388 aaKnown RBP12.53□□□□□ -0.4
DENND6A-206ENST00000487662 PCDHGA4Q9Y5G9 962 aa12.52□□□□□ -0.41
DENND6A-206ENST00000487662 NBR1Q14596 966 aa12.48□□□□□ -0.41
DENND6A-206ENST00000487662 ARSIQ5FYB1 569 aa12.48□□□□□ -0.41
DENND6A-206ENST00000487662 ZSWIM6Q9HCJ5 1215 aa12.48□□□□□ -0.41
DENND6A-206ENST00000487662 ARIH1Q9Y4X5 557 aaPredicted RBP12.48□□□□□ -0.41
DENND6A-206ENST00000487662 ZNF316A6NFI3 1004 aaPredicted RBP12.47□□□□□ -0.41
DENND6A-206ENST00000487662 FAM163AQ96GL9 167 aaPredicted RBP12.46□□□□□ -0.41
DENND6A-206ENST00000487662 KHSRPQ92945 711 aaKnown RBP eCLIP12.45□□□□□ -0.426e-6■■□□□ 12
DENND6A-206ENST00000487662 EVI5O60447 810 aa12.44□□□□□ -0.42
DENND6A-206ENST00000487662 GPR153Q6NV75 609 aa12.44□□□□□ -0.42
DENND6A-206ENST00000487662 SPDYE16A6NNV3 312 aaPredicted RBP12.43□□□□□ -0.42
DENND6A-206ENST00000487662 NUDT7P0C024 238 aa12.43□□□□□ -0.42
DENND6A-206ENST00000487662 PDIA6Q15084 440 aa12.42□□□□□ -0.42
DENND6A-206ENST00000487662 BCANQ96GW7 911 aa12.41□□□□□ -0.42
DENND6A-206ENST00000487662 ST18O60284 1047 aa12.4□□□□□ -0.42
DENND6A-206ENST00000487662 HOXB1P14653 301 aaPredicted RBP12.4□□□□□ -0.42
DENND6A-206ENST00000487662 SEMA3EO15041 775 aa12.38□□□□□ -0.43
DENND6A-206ENST00000487662 GRXCR2A6NFK2 248 aa12.33□□□□□ -0.44
DENND6A-206ENST00000487662 DDX12PQ92771 950 aa12.33□□□□□ -0.44
DENND6A-206ENST00000487662 MARVELD3Q96A59 401 aa12.33□□□□□ -0.44
DENND6A-206ENST00000487662 ANO8Q9HCE9 1232 aaPredicted RBP12.33□□□□□ -0.44
DENND6A-206ENST00000487662 KDM4FA0A1W2PPD8 638 aa12.32□□□□□ -0.44
DENND6A-206ENST00000487662 EMP3P54852 163 aa12.32□□□□□ -0.44
DENND6A-206ENST00000487662 LHX6Q9UPM6 363 aa12.32□□□□□ -0.44
DENND6A-206ENST00000487662 MLLT3P42568 568 aaPredicted RBP12.31□□□□□ -0.44
DENND6A-206ENST00000487662 TESPA1A2RU30 521 aaPredicted RBP12.29□□□□□ -0.44
DENND6A-206ENST00000487662 TULP1O00294 542 aaPredicted RBP12.29□□□□□ -0.44
DENND6A-206ENST00000487662 SMYD5Q6GMV2 418 aa12.29□□□□□ -0.44
DENND6A-206ENST00000487662 ERBB3P21860 1342 aa12.29□□□□□ -0.44
DENND6A-206ENST00000487662 PTGER2P43116 358 aa12.28□□□□□ -0.44
DENND6A-206ENST00000487662 ZNF454Q8N9F8 522 aa12.28□□□□□ -0.44
DENND6A-206ENST00000487662 LCE2DQ5TA82 110 aaPredicted RBP12.26□□□□□ -0.45
DENND6A-206ENST00000487662 JPH4Q96JJ6 628 aa12.26□□□□□ -0.45
DENND6A-206ENST00000487662 PSDA5PKW4 1024 aaPredicted RBP12.25□□□□□ -0.45
DENND6A-206ENST00000487662 PHF14O94880 888 aa12.25□□□□□ -0.45
DENND6A-206ENST00000487662 FAM205CA6NFA0 338 aa12.24□□□□□ -0.45
DENND6A-206ENST00000487662 FOSBP53539 338 aa12.23□□□□□ -0.45
DENND6A-206ENST00000487662 PPP4R3BQ5MIZ7 849 aa12.23□□□□□ -0.45
DENND6A-206ENST00000487662 VARS2Q5ST30 1063 aaKnown RBP12.23□□□□□ -0.45
DENND6A-206ENST00000487662 EPAS1Q99814 870 aa12.23□□□□□ -0.45
DENND6A-206ENST00000487662 PCDHGA10Q9Y5H3 936 aa12.23□□□□□ -0.45
DENND6A-206ENST00000487662 TYW1BQ6NUM6 668 aa12.22□□□□□ -0.45
DENND6A-206ENST00000487662 RBM33Q96EV2 1170 aaKnown RBP12.21□□□□□ -0.45
DENND6A-206ENST00000487662 ZDHHC16Q969W1 377 aa12.2□□□□□ -0.46
DENND6A-206ENST00000487662 OSBPP22059 807 aa12.19□□□□□ -0.46
DENND6A-206ENST00000487662 FBXW7Q969H0 707 aa12.18□□□□□ -0.46
DENND6A-206ENST00000487662 HS3ST6Q96QI5 342 aa12.18□□□□□ -0.46
DENND6A-206ENST00000487662 MAP3K7O43318 606 aa12.17□□□□□ -0.46
DENND6A-206ENST00000487662 RBM26Q5T8P6 1007 aaKnown RBP12.16□□□□□ -0.46
DENND6A-206ENST00000487662 EN1Q05925 392 aaPredicted RBP12.15□□□□□ -0.46
DENND6A-206ENST00000487662 LMOD2Q6P5Q4 547 aa12.15□□□□□ -0.46
DENND6A-206ENST00000487662 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.15□□□□□ -0.46
DENND6A-206ENST00000487662 ADAM33Q9BZ11 813 aa12.15□□□□□ -0.46
DENND6A-206ENST00000487662 PRIM1P49642 420 aaKnown RBP12.13□□□□□ -0.47
DENND6A-206ENST00000487662 NUTM2FA1L443 756 aa12.12□□□□□ -0.47
DENND6A-206ENST00000487662 POTEB3A0JP26 581 aa12.11□□□□□ -0.47
DENND6A-206ENST00000487662 POTEBQ6S5H4 581 aa12.11□□□□□ -0.47
DENND6A-206ENST00000487662 KCNH8Q96L42 1107 aa12.11□□□□□ -0.47
DENND6A-206ENST00000487662 PTPREP23469 700 aa12.1□□□□□ -0.47
DENND6A-206ENST00000487662 TSR1Q2NL82 804 aaKnown RBP12.1□□□□□ -0.47
DENND6A-206ENST00000487662 C6orf132Q5T0Z8 1188 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms