RNA–Protein interactions for RNA: ENST00000487662.1

DENND6A-206, Transcript of DENN domain containing 6A, humanhuman

TSL 2

Gene DENND6A, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND6A-206ENST00000487662 AEBP2Q6ZN18 517 aaPredicted RBP27.27■■□□□ 1.96
DENND6A-206ENST00000487662 CHIC1Q5VXU3 224 aa26.71■■□□□ 1.87
DENND6A-206ENST00000487662 PHF23Q9BUL5 403 aaPredicted RBP23.48■■□□□ 1.35
DENND6A-206ENST00000487662 SENP3Q9H4L4 574 aaPredicted RBP23.18■■□□□ 1.3
DENND6A-206ENST00000487662 PLPPR3Q6T4P5 718 aa21.75■■□□□ 1.07
DENND6A-206ENST00000487662 FOXD1Q16676 465 aa21.48■■□□□ 1.03
DENND6A-206ENST00000487662 ADRA2BP18089 450 aa20.73■□□□□ 0.91
DENND6A-206ENST00000487662 PPP6R1Q9UPN7 881 aa20.71■□□□□ 0.91
DENND6A-206ENST00000487662 PIAS4Q8N2W9 510 aaPredicted RBP20.33■□□□□ 0.85
DENND6A-206ENST00000487662 MSH5O43196 834 aa19.81■□□□□ 0.76
DENND6A-206ENST00000487662 PPP4R3CPQ6ZMV5 832 aa19.18■□□□□ 0.66
DENND6A-206ENST00000487662 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
DENND6A-206ENST00000487662 KCNA4P22459 653 aa18.8■□□□□ 0.6
DENND6A-206ENST00000487662 MAPK8IP2Q13387 824 aaPredicted RBP18.79■□□□□ 0.6
DENND6A-206ENST00000487662 NCBP3Q53F19 620 aaKnown RBP18.72■□□□□ 0.59
DENND6A-206ENST00000487662 CNKSR2Q8WXI2 1034 aa18.62■□□□□ 0.57
DENND6A-206ENST00000487662 DMRT2Q9Y5R5 561 aa18.49■□□□□ 0.55
DENND6A-206ENST00000487662 NPM3O75607 178 aaKnown RBP18.41■□□□□ 0.54
DENND6A-206ENST00000487662 RNF216Q9NWF9 866 aaPredicted RBP18.22■□□□□ 0.51
DENND6A-206ENST00000487662 HOXD11P31277 338 aaPredicted RBP18.11■□□□□ 0.49
DENND6A-206ENST00000487662 SLC4A1APQ9BWU0 796 aaKnown RBP17.95■□□□□ 0.46
DENND6A-206ENST00000487662 POTEDQ86YR6 584 aa17.91■□□□□ 0.46
DENND6A-206ENST00000487662 DCAF8L1A6NGE4 600 aa17.81■□□□□ 0.44
DENND6A-206ENST00000487662 DNAJC5BQ9UF47 199 aa17.75■□□□□ 0.43
DENND6A-206ENST00000487662 EHMT2Q96KQ7 1210 aa17.56■□□□□ 0.4
DENND6A-206ENST00000487662 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.35■□□□□ 0.37
DENND6A-206ENST00000487662 SLC4A2P04920 1241 aa17.34■□□□□ 0.37
DENND6A-206ENST00000487662 FOXD4L1Q9NU39 408 aa17.29■□□□□ 0.36
DENND6A-206ENST00000487662 ZBTB22O15209 634 aa17.27■□□□□ 0.36
DENND6A-206ENST00000487662 CSRNP3Q8WYN3 585 aa17.24■□□□□ 0.35
DENND6A-206ENST00000487662 MYCNP04198 464 aaPredicted RBP17.03■□□□□ 0.32
DENND6A-206ENST00000487662 U3KPZ7 1027 aaPredicted RBP17.02■□□□□ 0.32
DENND6A-206ENST00000487662 RNF39Q9H2S5 420 aa16.95■□□□□ 0.3
DENND6A-206ENST00000487662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.86■□□□□ 0.29
DENND6A-206ENST00000487662 HNRNPUL2Q1KMD3 747 aaKnown RBP16.86■□□□□ 0.29
DENND6A-206ENST00000487662 SAMD1Q6SPF0 538 aaPredicted RBP16.8■□□□□ 0.28
DENND6A-206ENST00000487662 C1QBPQ07021 282 aaKnown RBP16.77■□□□□ 0.28
DENND6A-206ENST00000487662 APLP2Q06481 763 aa16.69■□□□□ 0.26
DENND6A-206ENST00000487662 ATXN8OSP0DMR3 200 aa16.65■□□□□ 0.26
DENND6A-206ENST00000487662 CACNB1Q02641 598 aaPredicted RBP16.54■□□□□ 0.24
DENND6A-206ENST00000487662 SPINK5Q9NQ38 1064 aaPredicted RBP16.54■□□□□ 0.24
DENND6A-206ENST00000487662 ATF5Q9Y2D1 282 aaPredicted RBP16.54■□□□□ 0.24
DENND6A-206ENST00000487662 CAPN15O75808 1086 aa16.53■□□□□ 0.24
DENND6A-206ENST00000487662 TRHP20396 242 aaPredicted RBP16.47■□□□□ 0.23
DENND6A-206ENST00000487662 ZNF219Q9P2Y4 722 aaPredicted RBP16.42■□□□□ 0.22
DENND6A-206ENST00000487662 ABCB7O75027 752 aa16.21■□□□□ 0.19
DENND6A-206ENST00000487662 POLA2Q14181 598 aa16.18■□□□□ 0.18
DENND6A-206ENST00000487662 DSG3P32926 999 aa16.16■□□□□ 0.18
DENND6A-206ENST00000487662 FBLN2P98095 1184 aa15.91■□□□□ 0.14
DENND6A-206ENST00000487662 ZBTB12Q9Y330 459 aaPredicted RBP15.91■□□□□ 0.14
DENND6A-206ENST00000487662 MKRN4PQ13434 485 aaPredicted RBP15.81■□□□□ 0.12
DENND6A-206ENST00000487662 FKBP8Q14318 412 aa15.64■□□□□ 0.09
DENND6A-206ENST00000487662 OSCARQ8IYS5 282 aa15.63■□□□□ 0.09
DENND6A-206ENST00000487662 SPDYE4A6NLX3 237 aa15.55■□□□□ 0.08
DENND6A-206ENST00000487662 SPDYE2BA6NHP3 402 aa15.47■□□□□ 0.07
DENND6A-206ENST00000487662 SPDYE6P0CI01 402 aa15.47■□□□□ 0.07
DENND6A-206ENST00000487662 SPDYE2Q495Y8 402 aa15.47■□□□□ 0.07
DENND6A-206ENST00000487662 ZNF692Q9BU19 519 aaPredicted RBP15.46■□□□□ 0.07
DENND6A-206ENST00000487662 RBM42Q9BTD8 480 aaKnown RBP15.43■□□□□ 0.06
DENND6A-206ENST00000487662 SSUH2Q9Y2M2 353 aa15.32■□□□□ 0.04
DENND6A-206ENST00000487662 PABPN1Q86U42 306 aaKnown RBP eCLIP15.25■□□□□ 0.03
DENND6A-206ENST00000487662 AKT1S1Q96B36 256 aa15.24■□□□□ 0.03
DENND6A-206ENST00000487662 PROM2Q8N271 834 aa15.2■□□□□ 0.02
DENND6A-206ENST00000487662 REM2Q8IYK8 340 aaPredicted RBP15.1■□□□□ 0.01
DENND6A-206ENST00000487662 FBXO3Q9UK99 471 aa15.06■□□□□ 0
DENND6A-206ENST00000487662 SPDYE1Q8NFV5 336 aaPredicted RBP15.02■□□□□ -0
DENND6A-206ENST00000487662 CLEC11AQ9Y240 323 aa15.01□□□□□ -0.01
DENND6A-206ENST00000487662 STAG3Q9UJ98 1225 aa15□□□□□ -0.01
DENND6A-206ENST00000487662 PITPNM1O00562 1244 aa14.93□□□□□ -0.02
DENND6A-206ENST00000487662 PRR29P0C7W0 189 aa14.85□□□□□ -0.03
DENND6A-206ENST00000487662 VASPP50552 380 aaPredicted RBP14.84□□□□□ -0.03
DENND6A-206ENST00000487662 MIER1Q8N108 512 aa14.77□□□□□ -0.05
DENND6A-206ENST00000487662 PLCD3Q8N3E9 789 aa14.77□□□□□ -0.05
DENND6A-206ENST00000487662 CHRDL2Q6WN34 429 aa14.76□□□□□ -0.05
DENND6A-206ENST00000487662 PLEKHG5O94827 1062 aa14.72□□□□□ -0.05
DENND6A-206ENST00000487662 KLHL34Q8N239 644 aa14.64□□□□□ -0.07
DENND6A-206ENST00000487662 IFNLR1Q8IU57 520 aaPredicted RBP14.62□□□□□ -0.07
DENND6A-206ENST00000487662 CREBZFQ9NS37 354 aa14.62□□□□□ -0.07
DENND6A-206ENST00000487662 FXR2P51116 673 aaKnown RBP eCLIP14.6□□□□□ -0.07
DENND6A-206ENST00000487662 CHADLQ6NUI6 762 aa14.6□□□□□ -0.07
DENND6A-206ENST00000487662 PRKAR2AP13861 404 aaKnown RBP14.58□□□□□ -0.08
DENND6A-206ENST00000487662 PIP4P2Q8N4L2 257 aa14.58□□□□□ -0.08
DENND6A-206ENST00000487662 ZBTB47Q9UFB7 747 aaPredicted RBP14.57□□□□□ -0.08
DENND6A-206ENST00000487662 SPOCK2Q92563 424 aa14.47□□□□□ -0.09
DENND6A-206ENST00000487662 NPM1P06748 294 aaKnown RBP eCLIP14.44□□□□□ -0.1
DENND6A-206ENST00000487662 MNX1P50219 401 aaPredicted RBP14.44□□□□□ -0.1
DENND6A-206ENST00000487662 FARP1Q9Y4F1 1045 aaPredicted RBP14.44□□□□□ -0.1
DENND6A-206ENST00000487662 AMER1Q5JTC6 1135 aaPredicted RBP14.35□□□□□ -0.11
DENND6A-206ENST00000487662 NUBP1P53384 320 aa14.31□□□□□ -0.12
DENND6A-206ENST00000487662 RTN4Q9NQC3 1192 aaKnown RBP14.3□□□□□ -0.12
DENND6A-206ENST00000487662 CIZ1Q9ULV3 898 aaPredicted RBP14.28□□□□□ -0.12
DENND6A-206ENST00000487662 DCAF8Q5TAQ9 597 aa14.26□□□□□ -0.13
DENND6A-206ENST00000487662 RASEFQ8IZ41 740 aa14.26□□□□□ -0.13
DENND6A-206ENST00000487662 FAM212AQ96EL1 285 aa14.26□□□□□ -0.13
DENND6A-206ENST00000487662 GSE1Q14687 1217 aa14.22□□□□□ -0.13
DENND6A-206ENST00000487662 POTEHQ6S545 545 aa14.22□□□□□ -0.13
DENND6A-206ENST00000487662 TSPYL2Q9H2G4 693 aaPredicted RBP14.22□□□□□ -0.13
DENND6A-206ENST00000487662 PAK3O75914 559 aaPredicted RBP14.2□□□□□ -0.14
DENND6A-206ENST00000487662 CD44P16070 742 aaKnown RBP14.17□□□□□ -0.14
DENND6A-206ENST00000487662 HAX1O00165 279 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms