RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 LARP6Q9BRS8 491 aaKnown RBP11.45□□□□□ -0.58
LMBR1-218ENST00000486837 POTEIP0CG38 1075 aa11.44□□□□□ -0.58
LMBR1-218ENST00000486837 E2F4Q16254 413 aa11.44□□□□□ -0.58
LMBR1-218ENST00000486837 KCNV2Q8TDN2 545 aa11.44□□□□□ -0.58
LMBR1-218ENST00000486837 DDX27Q96GQ7 796 aaKnown RBP11.43□□□□□ -0.58
LMBR1-218ENST00000486837 GPHNQ9NQX3 736 aaPredicted RBP11.42□□□□□ -0.58
LMBR1-218ENST00000486837 COLQQ9Y215 455 aaPredicted RBP11.42□□□□□ -0.58
LMBR1-218ENST00000486837 METRNQ9UJH8 293 aa11.41□□□□□ -0.58
LMBR1-218ENST00000486837 ARHGEF1Q92888 912 aaKnown RBP11.39□□□□□ -0.59
LMBR1-218ENST00000486837 POTEFA5A3E0 1075 aa11.38□□□□□ -0.59
LMBR1-218ENST00000486837 TMC2Q8TDI7 906 aa11.37□□□□□ -0.59
LMBR1-218ENST00000486837 CAMK2BQ13554 666 aa11.36□□□□□ -0.59
LMBR1-218ENST00000486837 PPP1R15BQ5SWA1 713 aa11.36□□□□□ -0.59
LMBR1-218ENST00000486837 ARIH1Q9Y4X5 557 aaPredicted RBP11.34□□□□□ -0.59
LMBR1-218ENST00000486837 FOXK1P85037 733 aa11.33□□□□□ -0.6
LMBR1-218ENST00000486837 KIF3CO14782 793 aa11.32□□□□□ -0.6
LMBR1-218ENST00000486837 DSG2Q14126 1118 aa11.31□□□□□ -0.6
LMBR1-218ENST00000486837 C2orf72A6NCS6 295 aa11.3□□□□□ -0.6
LMBR1-218ENST00000486837 TMEM92Q6UXU6 159 aa11.26□□□□□ -0.61
LMBR1-218ENST00000486837 C3orf67Q6ZVT6 689 aa11.26□□□□□ -0.61
LMBR1-218ENST00000486837 PLPP6Q8IY26 295 aa11.26□□□□□ -0.61
LMBR1-218ENST00000486837 TULP1O00294 542 aaPredicted RBP11.21□□□□□ -0.61
LMBR1-218ENST00000486837 TPRNQ4KMQ1 711 aa11.21□□□□□ -0.61
LMBR1-218ENST00000486837 EMILIN3Q9NT22 766 aa11.21□□□□□ -0.61
LMBR1-218ENST00000486837 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.2□□□□□ -0.62
LMBR1-218ENST00000486837 TESPA1A2RU30 521 aaPredicted RBP11.19□□□□□ -0.62
LMBR1-218ENST00000486837 SEMA3EO15041 775 aa11.18□□□□□ -0.62
LMBR1-218ENST00000486837 SPDYE16A6NNV3 312 aaPredicted RBP11.17□□□□□ -0.62
LMBR1-218ENST00000486837 DPYSL4O14531 572 aa11.16□□□□□ -0.62
LMBR1-218ENST00000486837 PRKCSHP14314 528 aaPredicted RBP11.16□□□□□ -0.62
LMBR1-218ENST00000486837 SMYD5Q6GMV2 418 aa11.16□□□□□ -0.62
LMBR1-218ENST00000486837 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.16□□□□□ -0.62
LMBR1-218ENST00000486837 PDIA6Q15084 440 aa11.15□□□□□ -0.62
LMBR1-218ENST00000486837 LMOD2Q6P5Q4 547 aa11.14□□□□□ -0.63
LMBR1-218ENST00000486837 OXER1Q8TDS5 423 aa11.13□□□□□ -0.63
LMBR1-218ENST00000486837 MAP3K9P80192 1104 aa11.11□□□□□ -0.63
LMBR1-218ENST00000486837 SLC34A2O95436 690 aa11.1□□□□□ -0.63
LMBR1-218ENST00000486837 POTEB2H3BUK9 544 aa11.08□□□□□ -0.64
LMBR1-218ENST00000486837 POTEJP0CG39 1038 aa11.08□□□□□ -0.64
LMBR1-218ENST00000486837 MAMSTRQ6ZN01 415 aa11.08□□□□□ -0.64
LMBR1-218ENST00000486837 PTCD2Q8WV60 388 aaKnown RBP11.08□□□□□ -0.64
LMBR1-218ENST00000486837 UPF1Q92900 1129 aaKnown RBP eCLIP11.08□□□□□ -0.64
LMBR1-218ENST00000486837 TBC1D12O60347 775 aa11.07□□□□□ -0.64
LMBR1-218ENST00000486837 SCUBE2Q9NQ36 999 aa11.06□□□□□ -0.64
LMBR1-218ENST00000486837 MLLT3P42568 568 aaPredicted RBP11.05□□□□□ -0.64
LMBR1-218ENST00000486837 ZNF316A6NFI3 1004 aaPredicted RBP11.02□□□□□ -0.65
LMBR1-218ENST00000486837 PTGER2P43116 358 aa11.02□□□□□ -0.65
LMBR1-218ENST00000486837 EVI5O60447 810 aa11.01□□□□□ -0.65
LMBR1-218ENST00000486837 SLAIN1Q8ND83 568 aa11.01□□□□□ -0.65
LMBR1-218ENST00000486837 DOK7Q18PE1 504 aa10.97□□□□□ -0.65
LMBR1-218ENST00000486837 ZC3H15Q8WU90 426 aaKnown RBP10.97□□□□□ -0.65
LMBR1-218ENST00000486837 ANO8Q9HCE9 1232 aaPredicted RBP10.97□□□□□ -0.65
LMBR1-218ENST00000486837 PCDHGA4Q9Y5G9 962 aa10.97□□□□□ -0.65
LMBR1-218ENST00000486837 GRXCR2A6NFK2 248 aa10.95□□□□□ -0.66
LMBR1-218ENST00000486837 RBM26Q5T8P6 1007 aaKnown RBP10.95□□□□□ -0.66
LMBR1-218ENST00000486837 RIMBP2O15034 1052 aa10.94□□□□□ -0.66
LMBR1-218ENST00000486837 ZSWIM6Q9HCJ5 1215 aa10.94□□□□□ -0.66
LMBR1-218ENST00000486837 HOXB3P14651 431 aaPredicted RBP10.93□□□□□ -0.66
LMBR1-218ENST00000486837 GPIHBP1Q8IV16 184 aa10.93□□□□□ -0.66
LMBR1-218ENST00000486837 DDX12PQ92771 950 aa10.92□□□□□ -0.66
LMBR1-218ENST00000486837 OSBPP22059 807 aa10.91□□□□□ -0.66
LMBR1-218ENST00000486837 KDM4FA0A1W2PPD8 638 aa10.9□□□□□ -0.66
LMBR1-218ENST00000486837 ZMYND10O75800 440 aa10.9□□□□□ -0.66
LMBR1-218ENST00000486837 SNPHO15079 494 aa10.89□□□□□ -0.67
LMBR1-218ENST00000486837 PHF14O94880 888 aa10.89□□□□□ -0.67
LMBR1-218ENST00000486837 EPAS1Q99814 870 aa10.88□□□□□ -0.67
LMBR1-218ENST00000486837 ZNF710Q8N1W2 664 aa10.87□□□□□ -0.67
LMBR1-218ENST00000486837 GPR153Q6NV75 609 aa10.86□□□□□ -0.67
LMBR1-218ENST00000486837 BARGINQ6ZT62 677 aa10.86□□□□□ -0.67
LMBR1-218ENST00000486837 OTUD5Q96G74 571 aa10.85□□□□□ -0.67
LMBR1-218ENST00000486837 JPH4Q96JJ6 628 aa10.85□□□□□ -0.67
LMBR1-218ENST00000486837 ARSIQ5FYB1 569 aa10.84□□□□□ -0.67
LMBR1-218ENST00000486837 LHX8Q68G74 356 aa10.84□□□□□ -0.67
LMBR1-218ENST00000486837 NUTM2FA1L443 756 aa10.83□□□□□ -0.68
LMBR1-218ENST00000486837 GPR37O15354 613 aa10.83□□□□□ -0.68
LMBR1-218ENST00000486837 NUDT7P0C024 238 aa10.83□□□□□ -0.68
LMBR1-218ENST00000486837 PCDHGA10Q9Y5H3 936 aa10.83□□□□□ -0.68
LMBR1-218ENST00000486837 EN1Q05925 392 aaPredicted RBP10.82□□□□□ -0.68
LMBR1-218ENST00000486837 TYW1BQ6NUM6 668 aa10.82□□□□□ -0.68
LMBR1-218ENST00000486837 PRIM1P49642 420 aaKnown RBP10.81□□□□□ -0.68
LMBR1-218ENST00000486837 FOSBP53539 338 aa10.81□□□□□ -0.68
LMBR1-218ENST00000486837 FBXW7Q969H0 707 aa10.81□□□□□ -0.68
LMBR1-218ENST00000486837 SLC24A3Q9HC58 644 aa10.81□□□□□ -0.68
LMBR1-218ENST00000486837 FCHSD2O94868 740 aa10.8□□□□□ -0.68
LMBR1-218ENST00000486837 KHSRPQ92945 711 aaKnown RBP eCLIP10.8□□□□□ -0.683e-7■■■■□ 19.4
LMBR1-218ENST00000486837 MAP3K7O43318 606 aa10.78□□□□□ -0.68
LMBR1-218ENST00000486837 HIC1Q14526 733 aa10.78□□□□□ -0.68
LMBR1-218ENST00000486837 PSDA5PKW4 1024 aaPredicted RBP10.77□□□□□ -0.69
LMBR1-218ENST00000486837 GNPATO15228 680 aa10.77□□□□□ -0.69
LMBR1-218ENST00000486837 HOXB1P14653 301 aaPredicted RBP10.77□□□□□ -0.69
LMBR1-218ENST00000486837 PTGDRQ13258 359 aa10.76□□□□□ -0.69
LMBR1-218ENST00000486837 ZNF454Q8N9F8 522 aa10.76□□□□□ -0.69
LMBR1-218ENST00000486837 KRI1Q8N9T8 703 aaKnown RBP10.76□□□□□ -0.69
LMBR1-218ENST00000486837 ZDHHC16Q969W1 377 aa10.76□□□□□ -0.69
LMBR1-218ENST00000486837 AK7Q96M32 723 aa10.75□□□□□ -0.69
LMBR1-218ENST00000486837 RBM33Q96EV2 1170 aaKnown RBP10.74□□□□□ -0.69
LMBR1-218ENST00000486837 LHX6Q9UPM6 363 aa10.74□□□□□ -0.69
LMBR1-218ENST00000486837 MAP2K5Q13163 448 aa10.73□□□□□ -0.69
LMBR1-218ENST00000486837 MINK1Q8N4C8 1332 aaPredicted RBP10.73□□□□□ -0.69
LMBR1-218ENST00000486837 CERKQ8TCT0 537 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms