RNA–Protein interactions for RNA: ENST00000486593.5

LAMP2-204, Transcript of lysosomal associated membrane protein 2, humanhuman

TSL 5

Gene LAMP2, Length 1,069 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP2-204ENST00000486593 RAD54L2Q9Y4B4 1467 aa13.8□□□□□ -0.2
LAMP2-204ENST00000486593 ABCA5Q8WWZ7 1642 aa13.79□□□□□ -0.2
LAMP2-204ENST00000486593 ZNF467Q7Z7K2 595 aaPredicted RBP13.78□□□□□ -0.2
LAMP2-204ENST00000486593 CUL7Q14999 1698 aa13.77□□□□□ -0.21
LAMP2-204ENST00000486593 ERICH3Q5RHP9 1530 aa13.77□□□□□ -0.21
LAMP2-204ENST00000486593 RUSC2Q8N2Y8 1516 aa13.77□□□□□ -0.21
LAMP2-204ENST00000486593 COLQQ9Y215 455 aaPredicted RBP13.77□□□□□ -0.21
LAMP2-204ENST00000486593 RNF25Q96BH1 459 aaPredicted RBP13.76□□□□□ -0.21
LAMP2-204ENST00000486593 FAM9AQ8IZU1 332 aaPredicted RBP13.75□□□□□ -0.21
LAMP2-204ENST00000486593 GOLGA3Q08378 1498 aa13.74□□□□□ -0.21
LAMP2-204ENST00000486593 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
LAMP2-204ENST00000486593 PRXQ9BXM0 1461 aa13.73□□□□□ -0.21
LAMP2-204ENST00000486593 PSEN1P49768 467 aa13.72□□□□□ -0.21
LAMP2-204ENST00000486593 PBRM1Q86U86 1689 aa13.72□□□□□ -0.21
LAMP2-204ENST00000486593 PKD2Q13563 968 aa13.7□□□□□ -0.22
LAMP2-204ENST00000486593 OTUD5Q96G74 571 aa13.7□□□□□ -0.22
LAMP2-204ENST00000486593 EIF4G3O43432 1585 aaKnown RBP13.7□□□□□ -0.22
LAMP2-204ENST00000486593 IGF1RP08069 1367 aa13.7□□□□□ -0.22
LAMP2-204ENST00000486593 GRIN2BQ13224 1484 aa13.69□□□□□ -0.22
LAMP2-204ENST00000486593 TDRD9Q8NDG6 1382 aaKnown RBP13.68□□□□□ -0.22
LAMP2-204ENST00000486593 PDAP1Q13442 181 aaKnown RBP13.67□□□□□ -0.22
LAMP2-204ENST00000486593 IER5LQ5T953 404 aa13.67□□□□□ -0.22
LAMP2-204ENST00000486593 RAPGEF2Q9Y4G8 1499 aa13.67□□□□□ -0.22
LAMP2-204ENST00000486593 IRX5P78411 483 aaPredicted RBP13.66□□□□□ -0.22
LAMP2-204ENST00000486593 CARMIL1Q5VZK9 1371 aa13.65□□□□□ -0.22
LAMP2-204ENST00000486593 MAGI1Q96QZ7 1491 aaPredicted RBP13.64□□□□□ -0.23
LAMP2-204ENST00000486593 TNIKQ9UKE5 1360 aa13.64□□□□□ -0.23
LAMP2-204ENST00000486593 ZNF608Q9ULD9 1512 aaPredicted RBP13.64□□□□□ -0.23
LAMP2-204ENST00000486593 ADAMTS12P58397 1594 aa13.63□□□□□ -0.23
LAMP2-204ENST00000486593 AQRO60306 1485 aaKnown RBP eCLIP13.63□□□□□ -0.23
LAMP2-204ENST00000486593 FHAD1B1AJZ9 1412 aa13.63□□□□□ -0.23
LAMP2-204ENST00000486593 RIOK3O14730 519 aaKnown RBP13.6□□□□□ -0.23
LAMP2-204ENST00000486593 SEC24BO95487 1268 aa13.6□□□□□ -0.23
LAMP2-204ENST00000486593 LOC105371045A0A1W2PR82 267 aa13.58□□□□□ -0.24
LAMP2-204ENST00000486593 SNAPC4Q5SXM2 1469 aa13.57□□□□□ -0.24
LAMP2-204ENST00000486593 ECM2O94769 699 aaPredicted RBP13.57□□□□□ -0.24
LAMP2-204ENST00000486593 UBTFP17480 764 aaKnown RBP13.57□□□□□ -0.24
LAMP2-204ENST00000486593 CABP2Q9NPB3 220 aa13.56□□□□□ -0.24
LAMP2-204ENST00000486593 SYNJ2O15056 1496 aa13.55□□□□□ -0.24
LAMP2-204ENST00000486593 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.55□□□□□ -0.24
LAMP2-204ENST00000486593 RGL2O15211 777 aa13.55□□□□□ -0.24
LAMP2-204ENST00000486593 ZFP91Q96JP5 570 aaPredicted RBP13.55□□□□□ -0.24
LAMP2-204ENST00000486593 CTTNBP2Q8WZ74 1663 aa13.55□□□□□ -0.24
LAMP2-204ENST00000486593 PDCD7Q8N8D1 485 aaKnown RBP13.54□□□□□ -0.24
LAMP2-204ENST00000486593 OCEL1Q9H607 264 aa13.54□□□□□ -0.24
LAMP2-204ENST00000486593 PLCG2P16885 1265 aa13.53□□□□□ -0.24
LAMP2-204ENST00000486593 GRIN2AQ12879 1464 aa13.51□□□□□ -0.25
LAMP2-204ENST00000486593 CEP162Q5TB80 1403 aa13.51□□□□□ -0.25
LAMP2-204ENST00000486593 ILDR1Q86SU0 546 aaPredicted RBP13.51□□□□□ -0.25
LAMP2-204ENST00000486593 VGFO15240 615 aaPredicted RBP13.5□□□□□ -0.25
LAMP2-204ENST00000486593 MKRN3Q13064 507 aaKnown RBP13.5□□□□□ -0.25
LAMP2-204ENST00000486593 GOLGA2Q08379 1002 aa13.48□□□□□ -0.25
LAMP2-204ENST00000486593 EFCAB3Q8N7B9 438 aa13.47□□□□□ -0.25
LAMP2-204ENST00000486593 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.47□□□□□ -0.25
LAMP2-204ENST00000486593 EFCAB5A4FU69 1503 aa13.47□□□□□ -0.25
LAMP2-204ENST00000486593 DPY19L2Q6NUT2 758 aa13.46□□□□□ -0.25
LAMP2-204ENST00000486593 CLIP1P30622 1438 aa13.46□□□□□ -0.26
LAMP2-204ENST00000486593 CHMP7Q8WUX9 453 aaPredicted RBP13.45□□□□□ -0.26
LAMP2-204ENST00000486593 IQGAP2Q13576 1575 aa13.45□□□□□ -0.26
LAMP2-204ENST00000486593 KIAA0586Q9BVV6 1533 aa13.44□□□□□ -0.26
LAMP2-204ENST00000486593 NUP160Q12769 1436 aa13.43□□□□□ -0.26
LAMP2-204ENST00000486593 MAMSTRQ6ZN01 415 aa13.43□□□□□ -0.26
LAMP2-204ENST00000486593 CHD1O14646 1710 aa13.42□□□□□ -0.26
LAMP2-204ENST00000486593 SCUBE2Q9NQ36 999 aa13.41□□□□□ -0.26
LAMP2-204ENST00000486593 BCL11BQ9C0K0 894 aaPredicted RBP13.4□□□□□ -0.26
LAMP2-204ENST00000486593 CEP170Q5SW79 1584 aa13.39□□□□□ -0.27
LAMP2-204ENST00000486593 UGGT2Q9NYU1 1516 aa13.39□□□□□ -0.27
LAMP2-204ENST00000486593 SAMD9Q5K651 1589 aa13.38□□□□□ -0.27
LAMP2-204ENST00000486593 ARHGAP35Q9NRY4 1499 aa13.36□□□□□ -0.27
LAMP2-204ENST00000486593 MS4A4AQ96JQ5 239 aa13.36□□□□□ -0.27
LAMP2-204ENST00000486593 STK24Q9Y6E0 443 aa13.35□□□□□ -0.27
LAMP2-204ENST00000486593 VPS8Q8N3P4 1428 aa13.35□□□□□ -0.27
LAMP2-204ENST00000486593 STK25O00506 426 aa13.34□□□□□ -0.27
LAMP2-204ENST00000486593 PHF8Q9UPP1 1060 aa13.34□□□□□ -0.27
LAMP2-204ENST00000486593 ARAP1Q96P48 1450 aa13.32□□□□□ -0.28
LAMP2-204ENST00000486593 FMN1Q68DA7 1419 aa13.31□□□□□ -0.28
LAMP2-204ENST00000486593 CARMIL2Q6F5E8 1435 aa13.3□□□□□ -0.28
LAMP2-204ENST00000486593 KIAA0556O60303 1618 aa13.3□□□□□ -0.28
LAMP2-204ENST00000486593 SHROOM2Q13796 1616 aa13.3□□□□□ -0.28
LAMP2-204ENST00000486593 CLASP1Q7Z460 1538 aa13.29□□□□□ -0.28
LAMP2-204ENST00000486593 SOX12O15370 315 aa13.29□□□□□ -0.28
LAMP2-204ENST00000486593 LCE2DQ5TA82 110 aaPredicted RBP13.29□□□□□ -0.28
LAMP2-204ENST00000486593 SLAIN1Q8ND83 568 aa13.29□□□□□ -0.28
LAMP2-204ENST00000486593 FBXO22Q8NEZ5 403 aa13.28□□□□□ -0.28
LAMP2-204ENST00000486593 TAOK2Q9UL54 1235 aa13.28□□□□□ -0.28
LAMP2-204ENST00000486593 L3MBTL3Q96JM7 780 aaPredicted RBP13.27□□□□□ -0.29
LAMP2-204ENST00000486593 MFRPQ9BY79 579 aa13.27□□□□□ -0.29
LAMP2-204ENST00000486593 BOLA1Q9Y3E2 137 aa13.26□□□□□ -0.29
LAMP2-204ENST00000486593 DISP1Q96F81 1524 aa13.25□□□□□ -0.29
LAMP2-204ENST00000486593 FYCO1Q9BQS8 1478 aa13.25□□□□□ -0.29
LAMP2-204ENST00000486593 RANGAP1P46060 587 aaPredicted RBP13.25□□□□□ -0.29
LAMP2-204ENST00000486593 JPH4Q96JJ6 628 aa13.25□□□□□ -0.29
LAMP2-204ENST00000486593 MAP3K1Q13233 1512 aa13.23□□□□□ -0.29
LAMP2-204ENST00000486593 FHOD3Q2V2M9 1422 aa13.23□□□□□ -0.29
LAMP2-204ENST00000486593 TMEM121BQ9BXQ6 578 aaPredicted RBP13.23□□□□□ -0.29
LAMP2-204ENST00000486593 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.23□□□□□ -0.29
LAMP2-204ENST00000486593 CASKIN1Q8WXD9 1431 aa13.22□□□□□ -0.29
LAMP2-204ENST00000486593 PCF11O94913 1555 aaKnown RBP13.2□□□□□ -0.3
LAMP2-204ENST00000486593 PRG4Q92954 1404 aaPredicted RBP13.2□□□□□ -0.3
LAMP2-204ENST00000486593 HECW1Q76N89 1606 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms