RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 METRNQ9UJH8 293 aa14.02□□□□□ -0.17
RTN4-214ENST00000486085 KCNV2Q8TDN2 545 aa14.01□□□□□ -0.17
RTN4-214ENST00000486085 L3MBTL3Q96JM7 780 aaPredicted RBP14.01□□□□□ -0.17
RTN4-214ENST00000486085 POTEFA5A3E0 1075 aa14□□□□□ -0.17
RTN4-214ENST00000486085 E2F4Q16254 413 aa13.99□□□□□ -0.17
RTN4-214ENST00000486085 DDX27Q96GQ7 796 aaKnown RBP13.99□□□□□ -0.17
RTN4-214ENST00000486085 MFSD10Q14728 455 aa13.98□□□□□ -0.17
RTN4-214ENST00000486085 TMEM121BQ9BXQ6 578 aaPredicted RBP13.98□□□□□ -0.17
RTN4-214ENST00000486085 GPHNQ9NQX3 736 aaPredicted RBP13.96□□□□□ -0.17
RTN4-214ENST00000486085 TMC2Q8TDI7 906 aa13.94□□□□□ -0.18
RTN4-214ENST00000486085 PPP1R15BQ5SWA1 713 aa13.91□□□□□ -0.18
RTN4-214ENST00000486085 DSG2Q14126 1118 aa13.88□□□□□ -0.19
RTN4-214ENST00000486085 ARHGEF1Q92888 912 aaKnown RBP13.88□□□□□ -0.19
RTN4-214ENST00000486085 C2orf72A6NCS6 295 aa13.87□□□□□ -0.19
RTN4-214ENST00000486085 FOXK1P85037 733 aa13.84□□□□□ -0.19
RTN4-214ENST00000486085 CAMK2BQ13554 666 aa13.84□□□□□ -0.19
RTN4-214ENST00000486085 TMEM92Q6UXU6 159 aa13.84□□□□□ -0.19
RTN4-214ENST00000486085 KIF3CO14782 793 aa13.83□□□□□ -0.2
RTN4-214ENST00000486085 C3orf67Q6ZVT6 689 aa13.82□□□□□ -0.2
RTN4-214ENST00000486085 PLPP6Q8IY26 295 aa13.82□□□□□ -0.2
RTN4-214ENST00000486085 PRKCSHP14314 528 aaPredicted RBP13.8□□□□□ -0.2
RTN4-214ENST00000486085 TPRNQ4KMQ1 711 aa13.78□□□□□ -0.2
RTN4-214ENST00000486085 EMILIN3Q9NT22 766 aa13.75□□□□□ -0.21
RTN4-214ENST00000486085 ARIH1Q9Y4X5 557 aaPredicted RBP13.75□□□□□ -0.21
RTN4-214ENST00000486085 SEMA3EO15041 775 aa13.74□□□□□ -0.21
RTN4-214ENST00000486085 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.74□□□□□ -0.21
RTN4-214ENST00000486085 DPYSL4O14531 572 aa13.72□□□□□ -0.21
RTN4-214ENST00000486085 TESPA1A2RU30 521 aaPredicted RBP13.67□□□□□ -0.22
RTN4-214ENST00000486085 POTEB2H3BUK9 544 aa13.67□□□□□ -0.22
RTN4-214ENST00000486085 POTEJP0CG39 1038 aa13.67□□□□□ -0.22
RTN4-214ENST00000486085 UPF1Q92900 1129 aaKnown RBP eCLIP13.67□□□□□ -0.221e-32■■□□□ 14.3
RTN4-214ENST00000486085 TULP1O00294 542 aaPredicted RBP13.65□□□□□ -0.22
RTN4-214ENST00000486085 MAP3K9P80192 1104 aa13.65□□□□□ -0.22
RTN4-214ENST00000486085 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.65□□□□□ -0.22
RTN4-214ENST00000486085 LMOD2Q6P5Q4 547 aa13.63□□□□□ -0.23
RTN4-214ENST00000486085 SPDYE16A6NNV3 312 aaPredicted RBP13.61□□□□□ -0.23
RTN4-214ENST00000486085 SMYD5Q6GMV2 418 aa13.6□□□□□ -0.23
RTN4-214ENST00000486085 OXER1Q8TDS5 423 aa13.6□□□□□ -0.23
RTN4-214ENST00000486085 MLLT3P42568 568 aaPredicted RBP13.59□□□□□ -0.23
RTN4-214ENST00000486085 PDIA6Q15084 440 aa13.59□□□□□ -0.23
RTN4-214ENST00000486085 SLAIN1Q8ND83 568 aa13.55□□□□□ -0.24
RTN4-214ENST00000486085 SCUBE2Q9NQ36 999 aa13.55□□□□□ -0.24
RTN4-214ENST00000486085 TBC1D12O60347 775 aa13.54□□□□□ -0.24
RTN4-214ENST00000486085 MAMSTRQ6ZN01 415 aa13.54□□□□□ -0.24
RTN4-214ENST00000486085 PTCD2Q8WV60 388 aaKnown RBP13.54□□□□□ -0.24
RTN4-214ENST00000486085 SLC34A2O95436 690 aa13.52□□□□□ -0.25
RTN4-214ENST00000486085 EVI5O60447 810 aa13.51□□□□□ -0.25
RTN4-214ENST00000486085 GRXCR2A6NFK2 248 aa13.49□□□□□ -0.25
RTN4-214ENST00000486085 RBM26Q5T8P6 1007 aaKnown RBP13.47□□□□□ -0.25
RTN4-214ENST00000486085 PCDHGA4Q9Y5G9 962 aa13.46□□□□□ -0.25
RTN4-214ENST00000486085 DDX12PQ92771 950 aa13.45□□□□□ -0.26
RTN4-214ENST00000486085 ZNF316A6NFI3 1004 aaPredicted RBP13.44□□□□□ -0.26
RTN4-214ENST00000486085 ZC3H15Q8WU90 426 aaKnown RBP13.44□□□□□ -0.26
RTN4-214ENST00000486085 PTGER2P43116 358 aa13.42□□□□□ -0.26
RTN4-214ENST00000486085 DOK7Q18PE1 504 aa13.42□□□□□ -0.26
RTN4-214ENST00000486085 HOXB3P14651 431 aaPredicted RBP13.41□□□□□ -0.26
RTN4-214ENST00000486085 ANO8Q9HCE9 1232 aaPredicted RBP13.4□□□□□ -0.26
RTN4-214ENST00000486085 GPIHBP1Q8IV16 184 aa13.38□□□□□ -0.27
RTN4-214ENST00000486085 RIMBP2O15034 1052 aa13.37□□□□□ -0.27
RTN4-214ENST00000486085 OSBPP22059 807 aa13.37□□□□□ -0.27
RTN4-214ENST00000486085 ARSIQ5FYB1 569 aa13.37□□□□□ -0.27
RTN4-214ENST00000486085 KHSRPQ92945 711 aaKnown RBP eCLIP13.37□□□□□ -0.274e-9■■□□□ 11.9
RTN4-214ENST00000486085 OTUD5Q96G74 571 aa13.37□□□□□ -0.27
RTN4-214ENST00000486085 LHX8Q68G74 356 aa13.36□□□□□ -0.27
RTN4-214ENST00000486085 ZNF710Q8N1W2 664 aa13.36□□□□□ -0.27
RTN4-214ENST00000486085 NUTM2FA1L443 756 aa13.33□□□□□ -0.28
RTN4-214ENST00000486085 NUDT7P0C024 238 aa13.33□□□□□ -0.28
RTN4-214ENST00000486085 KDM4FA0A1W2PPD8 638 aa13.31□□□□□ -0.28
RTN4-214ENST00000486085 ZMYND10O75800 440 aa13.31□□□□□ -0.28
RTN4-214ENST00000486085 GPR153Q6NV75 609 aa13.31□□□□□ -0.28
RTN4-214ENST00000486085 ZSWIM6Q9HCJ5 1215 aa13.31□□□□□ -0.28
RTN4-214ENST00000486085 SNPHO15079 494 aa13.3□□□□□ -0.28
RTN4-214ENST00000486085 PRIM1P49642 420 aaKnown RBP13.3□□□□□ -0.28
RTN4-214ENST00000486085 PHF14O94880 888 aa13.29□□□□□ -0.28
RTN4-214ENST00000486085 EPAS1Q99814 870 aa13.28□□□□□ -0.28
RTN4-214ENST00000486085 PCDHGA10Q9Y5H3 936 aa13.28□□□□□ -0.28
RTN4-214ENST00000486085 RBM33Q96EV2 1170 aaKnown RBP13.27□□□□□ -0.29
RTN4-214ENST00000486085 SLC24A3Q9HC58 644 aa13.27□□□□□ -0.29
RTN4-214ENST00000486085 BARGINQ6ZT62 677 aa13.26□□□□□ -0.29
RTN4-214ENST00000486085 TYW1BQ6NUM6 668 aa13.24□□□□□ -0.29
RTN4-214ENST00000486085 KRI1Q8N9T8 703 aaKnown RBP13.24□□□□□ -0.29
RTN4-214ENST00000486085 JPH4Q96JJ6 628 aa13.24□□□□□ -0.29
RTN4-214ENST00000486085 GPR37O15354 613 aa13.23□□□□□ -0.29
RTN4-214ENST00000486085 MAP3K7O43318 606 aa13.23□□□□□ -0.29
RTN4-214ENST00000486085 EN1Q05925 392 aaPredicted RBP13.23□□□□□ -0.29
RTN4-214ENST00000486085 ZNF454Q8N9F8 522 aa13.23□□□□□ -0.29
RTN4-214ENST00000486085 FOSBP53539 338 aa13.22□□□□□ -0.29
RTN4-214ENST00000486085 LHX6Q9UPM6 363 aa13.22□□□□□ -0.29
RTN4-214ENST00000486085 FCHSD2O94868 740 aa13.2□□□□□ -0.3
RTN4-214ENST00000486085 HOXB1P14653 301 aaPredicted RBP13.19□□□□□ -0.3
RTN4-214ENST00000486085 FBXW7Q969H0 707 aa13.19□□□□□ -0.3
RTN4-214ENST00000486085 ZDHHC16Q969W1 377 aa13.18□□□□□ -0.3
RTN4-214ENST00000486085 CDHR5Q9HBB8 845 aa13.18□□□□□ -0.3
RTN4-214ENST00000486085 TSR1Q2NL82 804 aaKnown RBP13.17□□□□□ -0.3
RTN4-214ENST00000486085 PTGDRQ13258 359 aa13.16□□□□□ -0.3
RTN4-214ENST00000486085 GNPATO15228 680 aa13.15□□□□□ -0.3
RTN4-214ENST00000486085 HIC1Q14526 733 aa13.15□□□□□ -0.3
RTN4-214ENST00000486085 FECHP22830 423 aa13.14□□□□□ -0.31
RTN4-214ENST00000486085 AK7Q96M32 723 aa13.14□□□□□ -0.31
RTN4-214ENST00000486085 ADAM33Q9BZ11 813 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms