RNA–Protein interactions for RNA: ENST00000485876.5

NDUFA3-214, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA3, Length 963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-214ENST00000485876 ARHGEF12Q9NZN5 1544 aa20.84■□□□□ 0.93
NDUFA3-214ENST00000485876 SETD1BQ9UPS6 1966 aaKnown RBP20.83■□□□□ 0.93
NDUFA3-214ENST00000485876 HSPA1LP34931 641 aa20.83■□□□□ 0.93
NDUFA3-214ENST00000485876 MED1Q15648 1581 aaPredicted RBP20.83■□□□□ 0.92
NDUFA3-214ENST00000485876 P3H3Q8IVL6 736 aa20.82■□□□□ 0.92
NDUFA3-214ENST00000485876 ZMYM4Q5VZL5 1548 aa20.82■□□□□ 0.92
NDUFA3-214ENST00000485876 SCAF1Q9H7N4 1312 aaKnown RBP20.8■□□□□ 0.92
NDUFA3-214ENST00000485876 CTTNBP2Q8WZ74 1663 aa20.8■□□□□ 0.92
NDUFA3-214ENST00000485876 ATP10AO60312 1499 aa20.78■□□□□ 0.92
NDUFA3-214ENST00000485876 ZNF335Q9H4Z2 1342 aaPredicted RBP20.78■□□□□ 0.92
NDUFA3-214ENST00000485876 PLEKHD1A6NEE1 506 aa20.75■□□□□ 0.91
NDUFA3-214ENST00000485876 PIP4K2BP78356 416 aa20.75■□□□□ 0.91
NDUFA3-214ENST00000485876 NCOA1Q15788 1441 aa20.75■□□□□ 0.91
NDUFA3-214ENST00000485876 PRXQ9BXM0 1461 aa20.74■□□□□ 0.91
NDUFA3-214ENST00000485876 C9orf84Q5VXU9 1444 aa20.73■□□□□ 0.91
NDUFA3-214ENST00000485876 ESF1Q9H501 851 aaKnown RBP20.73■□□□□ 0.91
NDUFA3-214ENST00000485876 HECW1Q76N89 1606 aa20.73■□□□□ 0.91
NDUFA3-214ENST00000485876 CFAP74Q9C0B2 1584 aa20.72■□□□□ 0.91
NDUFA3-214ENST00000485876 SCAPERQ9BY12 1400 aa20.7■□□□□ 0.9
NDUFA3-214ENST00000485876 TRAPPC8Q9Y2L5 1435 aa20.7■□□□□ 0.9
NDUFA3-214ENST00000485876 TOM1O60784 492 aa20.69■□□□□ 0.9
NDUFA3-214ENST00000485876 NCKAP5LQ9HCH0 1330 aa20.69■□□□□ 0.9
NDUFA3-214ENST00000485876 EEA1Q15075 1411 aa20.68■□□□□ 0.9
NDUFA3-214ENST00000485876 CSRNP3Q8WYN3 585 aa20.65■□□□□ 0.9
NDUFA3-214ENST00000485876 CHIC1Q5VXU3 224 aa20.64■□□□□ 0.89
NDUFA3-214ENST00000485876 MYT1LQ9UL68 1186 aa20.63■□□□□ 0.89
NDUFA3-214ENST00000485876 PKD2Q13563 968 aa20.6■□□□□ 0.89
NDUFA3-214ENST00000485876 CAMSAP1Q5T5Y3 1602 aa20.6■□□□□ 0.89
NDUFA3-214ENST00000485876 RAPGEF6Q8TEU7 1601 aa20.6■□□□□ 0.89
NDUFA3-214ENST00000485876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.59■□□□□ 0.89
NDUFA3-214ENST00000485876 NUP153P49790 1475 aaKnown RBP20.56■□□□□ 0.88
NDUFA3-214ENST00000485876 C3P01024 1663 aa20.56■□□□□ 0.88
NDUFA3-214ENST00000485876 EFCAB2Q5VUJ9 269 aa20.54■□□□□ 0.88
NDUFA3-214ENST00000485876 PPP6R1Q9UPN7 881 aa20.54■□□□□ 0.88
NDUFA3-214ENST00000485876 PLCH2O75038 1416 aa20.53■□□□□ 0.88
NDUFA3-214ENST00000485876 AFAP1Q8N556 730 aa20.52■□□□□ 0.88
NDUFA3-214ENST00000485876 RGS17Q9UGC6 210 aaPredicted RBP20.5■□□□□ 0.87
NDUFA3-214ENST00000485876 CNTLNQ9NXG0 1405 aa20.48■□□□□ 0.87
NDUFA3-214ENST00000485876 SENP3Q9H4L4 574 aaPredicted RBP20.48■□□□□ 0.87
NDUFA3-214ENST00000485876 NPATQ14207 1427 aa20.46■□□□□ 0.87
NDUFA3-214ENST00000485876 ZNF518AQ6AHZ1 1483 aa20.46■□□□□ 0.87
NDUFA3-214ENST00000485876 EHMT2Q96KQ7 1210 aa20.46■□□□□ 0.87
NDUFA3-214ENST00000485876 SAMD9Q5K651 1589 aa20.45■□□□□ 0.86
NDUFA3-214ENST00000485876 PLA2R1Q13018 1463 aa20.43■□□□□ 0.86
NDUFA3-214ENST00000485876 RANGAP1P46060 587 aaPredicted RBP20.43■□□□□ 0.86
NDUFA3-214ENST00000485876 PTPRKQ15262 1439 aa20.43■□□□□ 0.86
NDUFA3-214ENST00000485876 AGLP35573 1532 aa20.43■□□□□ 0.86
NDUFA3-214ENST00000485876 TCOF1Q13428 1488 aaKnown RBP20.42■□□□□ 0.86
NDUFA3-214ENST00000485876 ZMYM3Q14202 1370 aa20.41■□□□□ 0.86
NDUFA3-214ENST00000485876 REREQ9P2R6 1566 aa20.39■□□□□ 0.85
NDUFA3-214ENST00000485876 CPS1P31327 1500 aa20.39■□□□□ 0.85
NDUFA3-214ENST00000485876 DIP2CQ9Y2E4 1556 aa20.38■□□□□ 0.85
NDUFA3-214ENST00000485876 POTEAQ6S8J7 498 aa20.36■□□□□ 0.85
NDUFA3-214ENST00000485876 SHANK2Q9UPX8 1470 aa20.35■□□□□ 0.85
NDUFA3-214ENST00000485876 KDM5CP41229 1560 aa20.34■□□□□ 0.85
NDUFA3-214ENST00000485876 UBTFP17480 764 aaKnown RBP20.33■□□□□ 0.85
NDUFA3-214ENST00000485876 MLH3Q9UHC1 1453 aa20.32■□□□□ 0.84
NDUFA3-214ENST00000485876 ABCA6Q8N139 1617 aa20.28■□□□□ 0.84
NDUFA3-214ENST00000485876 CEP170BQ9Y4F5 1589 aaPredicted RBP20.28■□□□□ 0.84
NDUFA3-214ENST00000485876 SUPT6HQ7KZ85 1726 aaKnown RBP20.26■□□□□ 0.83
NDUFA3-214ENST00000485876 CDK11AQ9UQ88 783 aaPredicted RBP20.25■□□□□ 0.83
NDUFA3-214ENST00000485876 ARHGAP5Q13017 1502 aa20.25■□□□□ 0.83
NDUFA3-214ENST00000485876 ALKQ9UM73 1620 aa20.24■□□□□ 0.83
NDUFA3-214ENST00000485876 CDK13Q14004 1512 aaKnown RBP20.24■□□□□ 0.83
NDUFA3-214ENST00000485876 MROH2AA6NES4 1674 aa20.24■□□□□ 0.83
NDUFA3-214ENST00000485876 ZNF142P52746 1687 aaPredicted RBP20.24■□□□□ 0.83
NDUFA3-214ENST00000485876 MYO5CQ9NQX4 1742 aa20.24■□□□□ 0.83
NDUFA3-214ENST00000485876 MYO3AQ8NEV4 1616 aa20.24■□□□□ 0.83
NDUFA3-214ENST00000485876 ATP1B4Q9UN42 357 aaPredicted RBP20.23■□□□□ 0.83
NDUFA3-214ENST00000485876 SRCAPQ6ZRS2 3230 aa20.21■□□□□ 0.83
NDUFA3-214ENST00000485876 ANKLE2Q86XL3 938 aa20.21■□□□□ 0.83
NDUFA3-214ENST00000485876 A2ML1A8K2U0 1454 aa20.18■□□□□ 0.82
NDUFA3-214ENST00000485876 ARHGAP35Q9NRY4 1499 aa20.18■□□□□ 0.82
NDUFA3-214ENST00000485876 UPF1Q92900 1129 aaKnown RBP eCLIP20.17■□□□□ 0.82
NDUFA3-214ENST00000485876 GGT6Q6P531 493 aa20.16■□□□□ 0.82
NDUFA3-214ENST00000485876 VWDEQ8N2E2 1590 aa20.13■□□□□ 0.81
NDUFA3-214ENST00000485876 DNMT1P26358 1616 aaKnown RBP20.13■□□□□ 0.81
NDUFA3-214ENST00000485876 CLTCQ00610 1675 aaKnown RBP20.11■□□□□ 0.81
NDUFA3-214ENST00000485876 THEMISQ8N1K5 641 aaPredicted RBP20.11■□□□□ 0.81
NDUFA3-214ENST00000485876 NEURL4Q96JN8 1562 aa20.11■□□□□ 0.81
NDUFA3-214ENST00000485876 FMN1Q68DA7 1419 aa20.1■□□□□ 0.81
NDUFA3-214ENST00000485876 KIDINS220Q9ULH0 1771 aa20.1■□□□□ 0.81
NDUFA3-214ENST00000485876 LRRC7Q96NW7 1537 aa20.09■□□□□ 0.81
NDUFA3-214ENST00000485876 KIF14Q15058 1648 aa20.09■□□□□ 0.81
NDUFA3-214ENST00000485876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.08■□□□□ 0.82e-6■■■■□ 19.8
NDUFA3-214ENST00000485876 SETD1AO15047 1707 aaKnown RBP20.07■□□□□ 0.8
NDUFA3-214ENST00000485876 SPAG9O60271 1321 aaKnown RBP20.07■□□□□ 0.8
NDUFA3-214ENST00000485876 NPHP4O75161 1426 aaPredicted RBP20.07■□□□□ 0.8
NDUFA3-214ENST00000485876 CLIP1P30622 1438 aa20.07■□□□□ 0.8
NDUFA3-214ENST00000485876 TROQ12816 1431 aaPredicted RBP20.07■□□□□ 0.8
NDUFA3-214ENST00000485876 POLR1AO95602 1720 aaPredicted RBP20.07■□□□□ 0.8
NDUFA3-214ENST00000485876 ABCC1P33527 1531 aa20.04■□□□□ 0.8
NDUFA3-214ENST00000485876 RNF17Q9BXT8 1623 aaKnown RBP20.04■□□□□ 0.8
NDUFA3-214ENST00000485876 FBXO31Q5XUX0 539 aaPredicted RBP20.03■□□□□ 0.8
NDUFA3-214ENST00000485876 TNRQ92752 1358 aa20.03■□□□□ 0.8
NDUFA3-214ENST00000485876 MED14O60244 1454 aa20.01■□□□□ 0.79
NDUFA3-214ENST00000485876 LRRIQ1Q96JM4 1722 aa20■□□□□ 0.79
NDUFA3-214ENST00000485876 TRIM52Q96A61 297 aa20■□□□□ 0.79
NDUFA3-214ENST00000485876 ZNF777Q9ULD5 760 aaPredicted RBP20■□□□□ 0.79
NDUFA3-214ENST00000485876 FAM135BQ49AJ0 1406 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms