RNA–Protein interactions for RNA: ENST00000485876.5

NDUFA3-214, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA3, Length 963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-214ENST00000485876 NISCHQ9Y2I1 1504 aa30.88■■■□□ 2.53
NDUFA3-214ENST00000485876 ABCC9O60706 1549 aa29.44■■■□□ 2.3
NDUFA3-214ENST00000485876 DNAJC5BQ9UF47 199 aa28.75■■■□□ 2.19
NDUFA3-214ENST00000485876 CCDC180Q9P1Z9 1646 aa28.1■■■□□ 2.09
NDUFA3-214ENST00000485876 RB1CC1Q8TDY2 1594 aa27.43■■□□□ 1.98
NDUFA3-214ENST00000485876 PABPN1Q86U42 306 aaKnown RBP eCLIP27.33■■□□□ 1.97
NDUFA3-214ENST00000485876 DNAJC5Q9H3Z4 198 aa27.31■■□□□ 1.96
NDUFA3-214ENST00000485876 NACADO15069 1562 aa26.96■■□□□ 1.91
NDUFA3-214ENST00000485876 DCAF8L2P0C7V8 631 aa26.86■■□□□ 1.89
NDUFA3-214ENST00000485876 CECR2Q9BXF3 1484 aa26.65■■□□□ 1.86
NDUFA3-214ENST00000485876 UNC13AQ9UPW8 1703 aa26.63■■□□□ 1.85
NDUFA3-214ENST00000485876 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
NDUFA3-214ENST00000485876 CC2D2AQ9P2K1 1620 aa26.45■■□□□ 1.82
NDUFA3-214ENST00000485876 MYO15BQ96JP2 1530 aa26.17■■□□□ 1.78
NDUFA3-214ENST00000485876 SHROOM4Q9ULL8 1493 aa26.17■■□□□ 1.78
NDUFA3-214ENST00000485876 EIF4G1Q04637 1599 aaKnown RBP26.1■■□□□ 1.77
NDUFA3-214ENST00000485876 CUX2O14529 1486 aa25.83■■□□□ 1.73
NDUFA3-214ENST00000485876 TRIM41Q8WV44 630 aa25.66■■□□□ 1.7
NDUFA3-214ENST00000485876 SCRIBQ14160 1630 aa25.63■■□□□ 1.69
NDUFA3-214ENST00000485876 ERCC6Q03468 1493 aa25.53■■□□□ 1.68
NDUFA3-214ENST00000485876 DCAF1Q9Y4B6 1507 aa25.4■■□□□ 1.66
NDUFA3-214ENST00000485876 ZCCHC6Q5VYS8 1495 aaKnown RBP25.29■■□□□ 1.64
NDUFA3-214ENST00000485876 NCAPD3P42695 1498 aa24.96■■□□□ 1.59
NDUFA3-214ENST00000485876 NESP48681 1621 aa24.92■■□□□ 1.58
NDUFA3-214ENST00000485876 THOC2Q8NI27 1593 aaKnown RBP24.79■■□□□ 1.56
NDUFA3-214ENST00000485876 ATAD2BQ9ULI0 1458 aa24.7■■□□□ 1.54
NDUFA3-214ENST00000485876 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
NDUFA3-214ENST00000485876 OSCARQ8IYS5 282 aa24.63■■□□□ 1.53
NDUFA3-214ENST00000485876 HMGXB3Q12766 1538 aa24.57■■□□□ 1.52
NDUFA3-214ENST00000485876 PDS5BQ9NTI5 1447 aa24.53■■□□□ 1.52
NDUFA3-214ENST00000485876 LAMC3Q9Y6N6 1575 aa24.51■■□□□ 1.51
NDUFA3-214ENST00000485876 AEBP2Q6ZN18 517 aaPredicted RBP24.48■■□□□ 1.51
NDUFA3-214ENST00000485876 KIF21AQ7Z4S6 1674 aa24.43■■□□□ 1.5
NDUFA3-214ENST00000485876 BAZ1AQ9NRL2 1556 aaPredicted RBP24.43■■□□□ 1.5
NDUFA3-214ENST00000485876 BAZ1BQ9UIG0 1483 aaKnown RBP24.4■■□□□ 1.5
NDUFA3-214ENST00000485876 MRC2Q9UBG0 1479 aa24.32■■□□□ 1.48
NDUFA3-214ENST00000485876 SMARCA4P51532 1647 aa24.29■■□□□ 1.48
NDUFA3-214ENST00000485876 TRHP20396 242 aaPredicted RBP24.29■■□□□ 1.48
NDUFA3-214ENST00000485876 WDR62O43379 1518 aa24.24■■□□□ 1.47
NDUFA3-214ENST00000485876 RIMBP3CA6NJZ7 1639 aa24.21■■□□□ 1.47
NDUFA3-214ENST00000485876 RIMBP3BA6NNM3 1639 aa24.21■■□□□ 1.47
NDUFA3-214ENST00000485876 RIMBP3Q9UFD9 1639 aa24.21■■□□□ 1.47
NDUFA3-214ENST00000485876 CADPSQ9ULU8 1353 aa24.18■■□□□ 1.46
NDUFA3-214ENST00000485876 CYB5RLQ6IPT4 315 aa24.13■■□□□ 1.45
NDUFA3-214ENST00000485876 ARHGEF11O15085 1522 aa24.05■■□□□ 1.44
NDUFA3-214ENST00000485876 PEG3Q9GZU2 1588 aa24.04■■□□□ 1.44
NDUFA3-214ENST00000485876 CEP164Q9UPV0 1460 aa23.99■■□□□ 1.43
NDUFA3-214ENST00000485876 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
NDUFA3-214ENST00000485876 MROH2BQ7Z745 1585 aa23.78■■□□□ 1.4
NDUFA3-214ENST00000485876 ARAP1Q96P48 1450 aa23.74■■□□□ 1.39
NDUFA3-214ENST00000485876 URB2Q14146 1524 aaKnown RBP23.71■■□□□ 1.39
NDUFA3-214ENST00000485876 ZNF608Q9ULD9 1512 aaPredicted RBP23.64■■□□□ 1.37
NDUFA3-214ENST00000485876 CFTRP13569 1480 aa23.61■■□□□ 1.37
NDUFA3-214ENST00000485876 IFT140Q96RY7 1462 aa23.57■■□□□ 1.36
NDUFA3-214ENST00000485876 ILDR1Q86SU0 546 aaPredicted RBP23.55■■□□□ 1.36
NDUFA3-214ENST00000485876 RSF1Q96T23 1441 aaPredicted RBP23.55■■□□□ 1.36
NDUFA3-214ENST00000485876 FBLN2P98095 1184 aa23.54■■□□□ 1.36
NDUFA3-214ENST00000485876 WIZO95785 1651 aa23.39■■□□□ 1.34
NDUFA3-214ENST00000485876 CHD1O14646 1710 aa23.36■■□□□ 1.33
NDUFA3-214ENST00000485876 EIF4G3O43432 1585 aaKnown RBP23.35■■□□□ 1.33
NDUFA3-214ENST00000485876 AQRO60306 1485 aaKnown RBP eCLIP23.33■■□□□ 1.33
NDUFA3-214ENST00000485876 TOPBP1Q92547 1522 aa23.25■■□□□ 1.31
NDUFA3-214ENST00000485876 ABCC8Q09428 1581 aa23.17■■□□□ 1.3
NDUFA3-214ENST00000485876 CHMP7Q8WUX9 453 aaPredicted RBP23.16■■□□□ 1.3
NDUFA3-214ENST00000485876 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
NDUFA3-214ENST00000485876 GAPVD1Q14C86 1478 aa23.08■■□□□ 1.29
NDUFA3-214ENST00000485876 TARBP1Q13395 1621 aaKnown RBP23.08■■□□□ 1.28
NDUFA3-214ENST00000485876 SYNJ1O43426 1573 aa23.05■■□□□ 1.28
NDUFA3-214ENST00000485876 PRDM2Q13029 1718 aa23.05■■□□□ 1.28
NDUFA3-214ENST00000485876 TDRD9Q8NDG6 1382 aaKnown RBP23.03■■□□□ 1.28
NDUFA3-214ENST00000485876 TOP2AP11388 1531 aaKnown RBP23.03■■□□□ 1.28
NDUFA3-214ENST00000485876 DNMBPQ6XZF7 1577 aa23.02■■□□□ 1.28
NDUFA3-214ENST00000485876 KDM4FA0A1W2PPD8 638 aa23■■□□□ 1.27
NDUFA3-214ENST00000485876 SNAPC4Q5SXM2 1469 aa22.99■■□□□ 1.27
NDUFA3-214ENST00000485876 POLA1P09884 1462 aaPredicted RBP22.94■■□□□ 1.26
NDUFA3-214ENST00000485876 RAD54L2Q9Y4B4 1467 aa22.92■■□□□ 1.26
NDUFA3-214ENST00000485876 SOGA1O94964 1423 aa22.91■■□□□ 1.26
NDUFA3-214ENST00000485876 MAGI1Q96QZ7 1491 aaPredicted RBP22.88■■□□□ 1.25
NDUFA3-214ENST00000485876 CCDC88BA6NC98 1476 aa22.85■■□□□ 1.25
NDUFA3-214ENST00000485876 SYNJ2O15056 1496 aa22.84■■□□□ 1.25
NDUFA3-214ENST00000485876 GRIN2BQ13224 1484 aa22.79■■□□□ 1.24
NDUFA3-214ENST00000485876 FAM69CQ0P6D2 419 aa22.76■■□□□ 1.23
NDUFA3-214ENST00000485876 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
NDUFA3-214ENST00000485876 KIF13AQ9H1H9 1805 aa22.72■■□□□ 1.23
NDUFA3-214ENST00000485876 ERCC6L2Q5T890 1561 aa22.7■■□□□ 1.22
NDUFA3-214ENST00000485876 FGD5Q6ZNL6 1462 aa22.63■■□□□ 1.21
NDUFA3-214ENST00000485876 NPM1P06748 294 aaKnown RBP eCLIP22.6■■□□□ 1.21
NDUFA3-214ENST00000485876 ABCC10Q5T3U5 1492 aa22.6■■□□□ 1.21
NDUFA3-214ENST00000485876 FBXO41Q8TF61 875 aa22.59■■□□□ 1.21
NDUFA3-214ENST00000485876 KDM6BO15054 1643 aa22.57■■□□□ 1.2
NDUFA3-214ENST00000485876 CEP170Q5SW79 1584 aa22.56■■□□□ 1.2
NDUFA3-214ENST00000485876 HECW2Q9P2P5 1572 aa22.48■■□□□ 1.19
NDUFA3-214ENST00000485876 GRIN2AQ12879 1464 aa22.47■■□□□ 1.19
NDUFA3-214ENST00000485876 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
NDUFA3-214ENST00000485876 ADGRL1O94910 1474 aa22.44■■□□□ 1.18
NDUFA3-214ENST00000485876 NUP160Q12769 1436 aa22.44■■□□□ 1.18
NDUFA3-214ENST00000485876 DIP2BQ9P265 1576 aa22.41■■□□□ 1.18
NDUFA3-214ENST00000485876 CUX1P39880 1505 aa22.4■■□□□ 1.18
NDUFA3-214ENST00000485876 PRG4Q92954 1404 aaPredicted RBP22.4■■□□□ 1.18
NDUFA3-214ENST00000485876 MAPKBP1O60336 1514 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms