RNA–Protein interactions for RNA: ENST00000485448.1

PLD3-211, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 1,308 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-211ENST00000485448 MAGI2Q86UL8 1455 aa27.35■■□□□ 1.97
PLD3-211ENST00000485448 VPS8Q8N3P4 1428 aa27.34■■□□□ 1.97
PLD3-211ENST00000485448 POGZQ7Z3K3 1410 aa27.29■■□□□ 1.96
PLD3-211ENST00000485448 CCNB3Q8WWL7 1395 aa27.29■■□□□ 1.96
PLD3-211ENST00000485448 CFDP1Q9UEE9 299 aaPredicted RBP27.28■■□□□ 1.96
PLD3-211ENST00000485448 FRMPD1Q5SYB0 1578 aa27.26■■□□□ 1.96
PLD3-211ENST00000485448 ARID4BQ4LE39 1312 aaPredicted RBP27.26■■□□□ 1.95
PLD3-211ENST00000485448 ZNF518AQ6AHZ1 1483 aa27.26■■□□□ 1.95
PLD3-211ENST00000485448 RICTORQ6R327 1708 aa27.25■■□□□ 1.95
PLD3-211ENST00000485448 ZMYM4Q5VZL5 1548 aa27.25■■□□□ 1.95
PLD3-211ENST00000485448 APLP2Q06481 763 aa27.24■■□□□ 1.95
PLD3-211ENST00000485448 GPATCH8Q9UKJ3 1502 aaKnown RBP27.24■■□□□ 1.95
PLD3-211ENST00000485448 PHF23Q9BUL5 403 aaPredicted RBP27.23■■□□□ 1.95
PLD3-211ENST00000485448 EHBP1L1Q8N3D4 1523 aa27.22■■□□□ 1.95
PLD3-211ENST00000485448 AFAP1Q8N556 730 aa27.22■■□□□ 1.95
PLD3-211ENST00000485448 ZNF777Q9ULD5 760 aaPredicted RBP27.22■■□□□ 1.95
PLD3-211ENST00000485448 PREX2Q70Z35 1606 aa27.22■■□□□ 1.95
PLD3-211ENST00000485448 MYT1LQ9UL68 1186 aa27.21■■□□□ 1.95
PLD3-211ENST00000485448 CDC42BPBQ9Y5S2 1711 aa27.19■■□□□ 1.94
PLD3-211ENST00000485448 ZFYVE16Q7Z3T8 1539 aa27.18■■□□□ 1.94
PLD3-211ENST00000485448 PLEKHH2Q8IVE3 1493 aa27.18■■□□□ 1.94
PLD3-211ENST00000485448 MAP3K1Q13233 1512 aa27.18■■□□□ 1.94
PLD3-211ENST00000485448 ARHGEF40Q8TER5 1519 aa27.16■■□□□ 1.94
PLD3-211ENST00000485448 KIAA1107Q9UPP5 1409 aa27.16■■□□□ 1.94
PLD3-211ENST00000485448 ATP10AO60312 1499 aa27.14■■□□□ 1.94
PLD3-211ENST00000485448 CDC42BPAQ5VT25 1732 aa27.14■■□□□ 1.94
PLD3-211ENST00000485448 TIAM1Q13009 1591 aa27.13■■□□□ 1.93
PLD3-211ENST00000485448 YEATS2Q9ULM3 1422 aa27.13■■□□□ 1.93
PLD3-211ENST00000485448 MLH3Q9UHC1 1453 aa27.12■■□□□ 1.93
PLD3-211ENST00000485448 ABCC1P33527 1531 aa27.11■■□□□ 1.93
PLD3-211ENST00000485448 RSPH4AQ5TD94 716 aa27.11■■□□□ 1.93
PLD3-211ENST00000485448 KDM5CP41229 1560 aa27.1■■□□□ 1.93
PLD3-211ENST00000485448 HNRNPMP52272 730 aaKnown RBP eCLIP27.1■■□□□ 1.93
PLD3-211ENST00000485448 LRRC9Q6ZRR7 1453 aa27.09■■□□□ 1.93
PLD3-211ENST00000485448 TRAPPC8Q9Y2L5 1435 aa27.09■■□□□ 1.93
PLD3-211ENST00000485448 C9orf84Q5VXU9 1444 aa27.08■■□□□ 1.93
PLD3-211ENST00000485448 NCOA2Q15596 1464 aa27.07■■□□□ 1.92
PLD3-211ENST00000485448 ARHGEF12Q9NZN5 1544 aa27.07■■□□□ 1.92
PLD3-211ENST00000485448 SUPT6HQ7KZ85 1726 aaKnown RBP27.06■■□□□ 1.92
PLD3-211ENST00000485448 SPAG9O60271 1321 aaKnown RBP27.06■■□□□ 1.92
PLD3-211ENST00000485448 SAMD9LQ8IVG5 1584 aa27.03■■□□□ 1.92
PLD3-211ENST00000485448 ITSN2Q9NZM3 1697 aa27.03■■□□□ 1.92
PLD3-211ENST00000485448 HECW2Q9P2P5 1572 aa27.02■■□□□ 1.92
PLD3-211ENST00000485448 KANK4Q5T7N3 995 aaPredicted RBP27.02■■□□□ 1.92
PLD3-211ENST00000485448 ADAMTSL3P82987 1691 aa26.99■■□□□ 1.91
PLD3-211ENST00000485448 BCORL1Q5H9F3 1711 aa26.99■■□□□ 1.91
PLD3-211ENST00000485448 SYCP2Q9BX26 1530 aa26.98■■□□□ 1.91
PLD3-211ENST00000485448 ZNF644Q9H582 1327 aaPredicted RBP26.98■■□□□ 1.91
PLD3-211ENST00000485448 MLECQ14165 292 aa26.96■■□□□ 1.91
PLD3-211ENST00000485448 PTPRMP28827 1452 aa26.96■■□□□ 1.91
PLD3-211ENST00000485448 REREQ9P2R6 1566 aa26.95■■□□□ 1.91
PLD3-211ENST00000485448 TSPY4P0CV99 314 aa26.93■■□□□ 1.9
PLD3-211ENST00000485448 TSPY10P0CW01 314 aa26.93■■□□□ 1.9
PLD3-211ENST00000485448 MIA2Q96PC5 1412 aa26.93■■□□□ 1.9
PLD3-211ENST00000485448 MBD5Q9P267 1494 aa26.93■■□□□ 1.9
PLD3-211ENST00000485448 ESF1Q9H501 851 aaKnown RBP26.91■■□□□ 1.9
PLD3-211ENST00000485448 RTEL1-TNFRSF6BF6WH68 1400 aa26.91■■□□□ 1.9
PLD3-211ENST00000485448 DIP2CQ9Y2E4 1556 aa26.91■■□□□ 1.9
PLD3-211ENST00000485448 AGLP35573 1532 aa26.9■■□□□ 1.9
PLD3-211ENST00000485448 MYOM3Q5VTT5 1437 aa26.88■■□□□ 1.89
PLD3-211ENST00000485448 KIDINS220Q9ULH0 1771 aa26.87■■□□□ 1.89
PLD3-211ENST00000485448 CAMSAP2Q08AD1 1489 aa26.87■■□□□ 1.89
PLD3-211ENST00000485448 MADDQ8WXG6 1647 aa26.86■■□□□ 1.89
PLD3-211ENST00000485448 ATP7AQ04656 1500 aa26.85■■□□□ 1.89
PLD3-211ENST00000485448 CCDC141Q6ZP82 1450 aa26.85■■□□□ 1.89
PLD3-211ENST00000485448 ABCA6Q8N139 1617 aa26.85■■□□□ 1.89
PLD3-211ENST00000485448 PPP6R1Q9UPN7 881 aa26.83■■□□□ 1.89
PLD3-211ENST00000485448 A2MP01023 1474 aa26.81■■□□□ 1.88
PLD3-211ENST00000485448 SIGLEC1Q9BZZ2 1709 aa26.79■■□□□ 1.88
PLD3-211ENST00000485448 INO80Q9ULG1 1556 aaPredicted RBP26.79■■□□□ 1.88
PLD3-211ENST00000485448 ARHGEF5Q12774 1597 aa26.78■■□□□ 1.88
PLD3-211ENST00000485448 DHX29Q7Z478 1369 aaKnown RBP26.77■■□□□ 1.88
PLD3-211ENST00000485448 CNTLNQ9NXG0 1405 aa26.77■■□□□ 1.88
PLD3-211ENST00000485448 RIMS1Q86UR5 1692 aaKnown RBP26.76■■□□□ 1.88
PLD3-211ENST00000485448 PLPPR3Q6T4P5 718 aa26.72■■□□□ 1.87
PLD3-211ENST00000485448 FER1L4A9Z1Z3 1794 aa26.72■■□□□ 1.87
PLD3-211ENST00000485448 GGT6Q6P531 493 aa26.71■■□□□ 1.87
PLD3-211ENST00000485448 ADGBQ8N7X0 1667 aa26.71■■□□□ 1.87
PLD3-211ENST00000485448 FGD6Q6ZV73 1430 aa26.68■■□□□ 1.86
PLD3-211ENST00000485448 PLXNC1O60486 1568 aa26.68■■□□□ 1.86
PLD3-211ENST00000485448 KIF3BO15066 747 aa26.66■■□□□ 1.86
PLD3-211ENST00000485448 CEBPAP49715 358 aaPredicted RBP26.66■■□□□ 1.86
PLD3-211ENST00000485448 ZMYM3Q14202 1370 aa26.63■■□□□ 1.85
PLD3-211ENST00000485448 MAST1Q9Y2H9 1570 aa26.63■■□□□ 1.85
PLD3-211ENST00000485448 TCOF1Q13428 1488 aaKnown RBP26.62■■□□□ 1.85
PLD3-211ENST00000485448 PTPN23Q9H3S7 1636 aa26.61■■□□□ 1.85
PLD3-211ENST00000485448 ABCC5O15440 1437 aa26.58■■□□□ 1.85
PLD3-211ENST00000485448 LMTK3Q96Q04 1460 aa26.58■■□□□ 1.84
PLD3-211ENST00000485448 SHANK2Q9UPX8 1470 aa26.57■■□□□ 1.84
PLD3-211ENST00000485448 WASHC2CQ9Y4E1 1318 aa26.57■■□□□ 1.84
PLD3-211ENST00000485448 FAM50AQ14320 339 aaKnown RBP26.56■■□□□ 1.84
PLD3-211ENST00000485448 SETD1BQ9UPS6 1966 aaKnown RBP26.56■■□□□ 1.84
PLD3-211ENST00000485448 NPATQ14207 1427 aa26.55■■□□□ 1.84
PLD3-211ENST00000485448 DAPK1P53355 1430 aa26.54■■□□□ 1.84
PLD3-211ENST00000485448 UHRF1BP1Q6BDS2 1440 aa26.54■■□□□ 1.84
PLD3-211ENST00000485448 FAM135AQ9P2D6 1515 aa26.53■■□□□ 1.84
PLD3-211ENST00000485448 ANKRD30AQ9BXX3 1397 aa26.53■■□□□ 1.84
PLD3-211ENST00000485448 RRP7BPQ9NSQ0 103 aa26.52■■□□□ 1.84
PLD3-211ENST00000485448 MROH2AA6NES4 1674 aa26.52■■□□□ 1.84
PLD3-211ENST00000485448 DUOX2Q9NRD8 1548 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms