RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 ILDR1Q86SU0 546 aaPredicted RBP41.99■■■■■ 4.31
SMDT1-203ENST00000484235 ARHGAP5Q13017 1502 aa41.98■■■■■ 4.31
SMDT1-203ENST00000484235 MAP3K1Q13233 1512 aa41.97■■■■■ 4.31
SMDT1-203ENST00000484235 DENND4BO75064 1496 aaPredicted RBP41.97■■■■■ 4.31
SMDT1-203ENST00000484235 APLP2Q06481 763 aa41.93■■■■■ 4.3
SMDT1-203ENST00000484235 GPATCH8Q9UKJ3 1502 aaKnown RBP41.92■■■■■ 4.3
SMDT1-203ENST00000484235 SCAPERQ9BY12 1400 aa41.92■■■■■ 4.3
SMDT1-203ENST00000484235 CCNB3Q8WWL7 1395 aa41.91■■■■■ 4.3
SMDT1-203ENST00000484235 LRRC9Q6ZRR7 1453 aa41.89■■■■■ 4.3
SMDT1-203ENST00000484235 PREX2Q70Z35 1606 aa41.88■■■■■ 4.3
SMDT1-203ENST00000484235 CDC42BPBQ9Y5S2 1711 aa41.88■■■■■ 4.29
SMDT1-203ENST00000484235 KANK4Q5T7N3 995 aaPredicted RBP41.86■■■■■ 4.29
SMDT1-203ENST00000484235 CDC42BPAQ5VT25 1732 aa41.84■■■■■ 4.29
SMDT1-203ENST00000484235 CFDP1Q9UEE9 299 aaPredicted RBP41.84■■■■■ 4.29
SMDT1-203ENST00000484235 FRMPD1Q5SYB0 1578 aa41.84■■■■■ 4.29
SMDT1-203ENST00000484235 ZNF777Q9ULD5 760 aaPredicted RBP41.79■■■■■ 4.28
SMDT1-203ENST00000484235 ADAMTSL3P82987 1691 aa41.79■■■■■ 4.28
SMDT1-203ENST00000484235 NCOA2Q15596 1464 aa41.79■■■■■ 4.28
SMDT1-203ENST00000484235 POGZQ7Z3K3 1410 aa41.78■■■■■ 4.28
SMDT1-203ENST00000484235 RICTORQ6R327 1708 aa41.78■■■■■ 4.28
SMDT1-203ENST00000484235 SUPT6HQ7KZ85 1726 aaKnown RBP41.76■■■■■ 4.28
SMDT1-203ENST00000484235 PTPRMP28827 1452 aa41.73■■■■■ 4.27
SMDT1-203ENST00000484235 AFAP1Q8N556 730 aa41.71■■■■■ 4.27
SMDT1-203ENST00000484235 ZNF518AQ6AHZ1 1483 aa41.69■■■■■ 4.26
SMDT1-203ENST00000484235 ZMYM4Q5VZL5 1548 aa41.69■■■■■ 4.26
SMDT1-203ENST00000484235 ABCC1P33527 1531 aa41.68■■■■■ 4.26
SMDT1-203ENST00000484235 MAGI2Q86UL8 1455 aa41.67■■■■■ 4.26
SMDT1-203ENST00000484235 ARHGEF12Q9NZN5 1544 aa41.65■■■■■ 4.26
SMDT1-203ENST00000484235 SAMD9LQ8IVG5 1584 aa41.63■■■■■ 4.26
SMDT1-203ENST00000484235 KIAA1107Q9UPP5 1409 aa41.63■■■■■ 4.26
SMDT1-203ENST00000484235 PLEKHH2Q8IVE3 1493 aa41.63■■■■■ 4.25
SMDT1-203ENST00000484235 BCORL1Q5H9F3 1711 aa41.63■■■■■ 4.25
SMDT1-203ENST00000484235 ITSN2Q9NZM3 1697 aa41.62■■■■■ 4.25
SMDT1-203ENST00000484235 TRAPPC8Q9Y2L5 1435 aa41.61■■■■■ 4.25
SMDT1-203ENST00000484235 HNRNPMP52272 730 aaKnown RBP eCLIP41.61■■■■■ 4.25
SMDT1-203ENST00000484235 ARID4BQ4LE39 1312 aaPredicted RBP41.59■■■■■ 4.25
SMDT1-203ENST00000484235 ZNF644Q9H582 1327 aaPredicted RBP41.59■■■■■ 4.25
SMDT1-203ENST00000484235 ARHGEF40Q8TER5 1519 aa41.57■■■■■ 4.25
SMDT1-203ENST00000484235 KDM5CP41229 1560 aa41.55■■■■■ 4.24
SMDT1-203ENST00000484235 ZFYVE16Q7Z3T8 1539 aa41.55■■■■■ 4.24
SMDT1-203ENST00000484235 YEATS2Q9ULM3 1422 aa41.55■■■■■ 4.24
SMDT1-203ENST00000484235 MADDQ8WXG6 1647 aa41.54■■■■■ 4.24
SMDT1-203ENST00000484235 SYCP2Q9BX26 1530 aa41.53■■■■■ 4.24
SMDT1-203ENST00000484235 MYT1LQ9UL68 1186 aa41.52■■■■■ 4.24
SMDT1-203ENST00000484235 MLH3Q9UHC1 1453 aa41.5■■■■■ 4.23
SMDT1-203ENST00000484235 MYOM3Q5VTT5 1437 aa41.47■■■■■ 4.23
SMDT1-203ENST00000484235 ATP10AO60312 1499 aa41.44■■■■■ 4.22
SMDT1-203ENST00000484235 MIA2Q96PC5 1412 aa41.44■■■■■ 4.22
SMDT1-203ENST00000484235 SPAG9O60271 1321 aaKnown RBP41.44■■■■■ 4.22
SMDT1-203ENST00000484235 MBD5Q9P267 1494 aa41.43■■■■■ 4.22
SMDT1-203ENST00000484235 RSPH4AQ5TD94 716 aa41.41■■■■■ 4.22
SMDT1-203ENST00000484235 CAMSAP2Q08AD1 1489 aa41.41■■■■■ 4.22
SMDT1-203ENST00000484235 LMTK3Q96Q04 1460 aa41.37■■■■■ 4.21
SMDT1-203ENST00000484235 SIGLEC1Q9BZZ2 1709 aa41.37■■■■■ 4.21
SMDT1-203ENST00000484235 C9orf84Q5VXU9 1444 aa41.35■■■■■ 4.21
SMDT1-203ENST00000484235 RIMS1Q86UR5 1692 aaKnown RBP41.33■■■■■ 4.21
SMDT1-203ENST00000484235 KIDINS220Q9ULH0 1771 aa41.29■■■■■ 4.2
SMDT1-203ENST00000484235 DIP2CQ9Y2E4 1556 aa41.29■■■■■ 4.2
SMDT1-203ENST00000484235 CCDC141Q6ZP82 1450 aa41.27■■■■■ 4.2
SMDT1-203ENST00000484235 ABCA6Q8N139 1617 aa41.25■■■■■ 4.19
SMDT1-203ENST00000484235 FGD6Q6ZV73 1430 aa41.24■■■■■ 4.19
SMDT1-203ENST00000484235 ATP7AQ04656 1500 aa41.23■■■■■ 4.19
SMDT1-203ENST00000484235 TSPY4P0CV99 314 aa41.23■■■■■ 4.19
SMDT1-203ENST00000484235 TSPY10P0CW01 314 aa41.23■■■■■ 4.19
SMDT1-203ENST00000484235 RTEL1-TNFRSF6BF6WH68 1400 aa41.23■■■■■ 4.19
SMDT1-203ENST00000484235 ARHGEF5Q12774 1597 aa41.23■■■■■ 4.19
SMDT1-203ENST00000484235 FBXO41Q8TF61 875 aa41.22■■■■■ 4.19
SMDT1-203ENST00000484235 REREQ9P2R6 1566 aa41.2■■■■■ 4.19
SMDT1-203ENST00000484235 INO80Q9ULG1 1556 aaPredicted RBP41.2■■■■■ 4.19
SMDT1-203ENST00000484235 MLECQ14165 292 aa41.18■■■■■ 4.18
SMDT1-203ENST00000484235 PPARGC1BQ86YN6 1023 aaKnown RBP41.18■■■■■ 4.18
SMDT1-203ENST00000484235 HSPA2P54652 639 aa41.15■■■■■ 4.18
SMDT1-203ENST00000484235 PTPN23Q9H3S7 1636 aa41.15■■■■■ 4.18
SMDT1-203ENST00000484235 PLPPR3Q6T4P5 718 aa41.12■■■■■ 4.17
SMDT1-203ENST00000484235 TCOF1Q13428 1488 aaKnown RBP41.12■■■■■ 4.17
SMDT1-203ENST00000484235 AGLP35573 1532 aa41.11■■■■■ 4.17
SMDT1-203ENST00000484235 A2MP01023 1474 aa41.08■■■■■ 4.17
SMDT1-203ENST00000484235 FER1L4A9Z1Z3 1794 aa41.04■■■■■ 4.16
SMDT1-203ENST00000484235 ABCC5O15440 1437 aa41.01■■■■■ 4.16
SMDT1-203ENST00000484235 FAM50AQ14320 339 aaKnown RBP41.01■■■■■ 4.16
SMDT1-203ENST00000484235 DHX29Q7Z478 1369 aaKnown RBP41■■■■■ 4.15
SMDT1-203ENST00000484235 MAST1Q9Y2H9 1570 aa40.99■■■■■ 4.15
SMDT1-203ENST00000484235 ADGBQ8N7X0 1667 aa40.98■■■■■ 4.15
SMDT1-203ENST00000484235 PLXNC1O60486 1568 aa40.97■■■■■ 4.15
SMDT1-203ENST00000484235 DAPK1P53355 1430 aa40.96■■■■■ 4.15
SMDT1-203ENST00000484235 CEBPAP49715 358 aaPredicted RBP40.94■■■■■ 4.14
SMDT1-203ENST00000484235 SHANK2Q9UPX8 1470 aa40.92■■■■■ 4.14
SMDT1-203ENST00000484235 DNMT1P26358 1616 aaKnown RBP40.91■■■■■ 4.14
SMDT1-203ENST00000484235 ESF1Q9H501 851 aaKnown RBP40.88■■■■■ 4.13
SMDT1-203ENST00000484235 GGT6Q6P531 493 aa40.85■■■■■ 4.13
SMDT1-203ENST00000484235 KIF3BO15066 747 aa40.84■■■■■ 4.13
SMDT1-203ENST00000484235 CHIC2Q9UKJ5 165 aa40.83■■■■■ 4.13
SMDT1-203ENST00000484235 PPP6R1Q9UPN7 881 aa40.83■■■■■ 4.13
SMDT1-203ENST00000484235 CROCC2H7BZ55 1655 aa40.82■■■■■ 4.12
SMDT1-203ENST00000484235 RRP7BPQ9NSQ0 103 aa40.81■■■■■ 4.12
SMDT1-203ENST00000484235 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.8■■■■■ 4.123e-8■■■□□ 16.5
SMDT1-203ENST00000484235 ANKRD30AQ9BXX3 1397 aa40.77■■■■■ 4.12
SMDT1-203ENST00000484235 KIF15Q9NS87 1388 aa40.77■■■■■ 4.12
SMDT1-203ENST00000484235 CNTLNQ9NXG0 1405 aa40.76■■■■■ 4.12
SMDT1-203ENST00000484235 PREX1Q8TCU6 1659 aa40.76■■■■■ 4.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms