RNA–Protein interactions for RNA: ENST00000484048.1

UBE2E1-209, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 3

Gene UBE2E1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-209ENST00000484048 RIMS1Q86UR5 1692 aaKnown RBP25.09■■□□□ 1.61
UBE2E1-209ENST00000484048 NEO1Q92859 1461 aa25.08■■□□□ 1.6
UBE2E1-209ENST00000484048 SUPT6HQ7KZ85 1726 aaKnown RBP25.07■■□□□ 1.6
UBE2E1-209ENST00000484048 FRMPD1Q5SYB0 1578 aa25.07■■□□□ 1.6
UBE2E1-209ENST00000484048 ABCA9Q8IUA7 1624 aa25.07■■□□□ 1.6
UBE2E1-209ENST00000484048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.06■■□□□ 1.6
UBE2E1-209ENST00000484048 HNRNPUL2Q1KMD3 747 aaKnown RBP25.06■■□□□ 1.6
UBE2E1-209ENST00000484048 PPARGC1BQ86YN6 1023 aaKnown RBP25.06■■□□□ 1.6
UBE2E1-209ENST00000484048 MTUS2Q5JR59 1369 aa25.05■■□□□ 1.6
UBE2E1-209ENST00000484048 CDK11AQ9UQ88 783 aaPredicted RBP25.04■■□□□ 1.6
UBE2E1-209ENST00000484048 TROQ12816 1431 aaPredicted RBP25.03■■□□□ 1.6
UBE2E1-209ENST00000484048 ARHGEF40Q8TER5 1519 aa25.02■■□□□ 1.6
UBE2E1-209ENST00000484048 KIF14Q15058 1648 aa24.99■■□□□ 1.59
UBE2E1-209ENST00000484048 SPATA31D1Q6ZQQ2 1576 aa24.99■■□□□ 1.59
UBE2E1-209ENST00000484048 PLEKHD1A6NEE1 506 aa24.98■■□□□ 1.59
UBE2E1-209ENST00000484048 PLPPR3Q6T4P5 718 aa24.98■■□□□ 1.59
UBE2E1-209ENST00000484048 POGZQ7Z3K3 1410 aa24.95■■□□□ 1.58
UBE2E1-209ENST00000484048 NCOA2Q15596 1464 aa24.94■■□□□ 1.58
UBE2E1-209ENST00000484048 FANCAO15360 1455 aa24.91■■□□□ 1.58
UBE2E1-209ENST00000484048 CDC42BPAQ5VT25 1732 aa24.89■■□□□ 1.58
UBE2E1-209ENST00000484048 DENND4BO75064 1496 aaPredicted RBP24.89■■□□□ 1.57
UBE2E1-209ENST00000484048 ITSN2Q9NZM3 1697 aa24.88■■□□□ 1.57
UBE2E1-209ENST00000484048 AKNAQ7Z591 1439 aa24.87■■□□□ 1.57
UBE2E1-209ENST00000484048 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.86■■□□□ 1.571e-6■■■□□ 18.8
UBE2E1-209ENST00000484048 TTC37Q6PGP7 1564 aa24.85■■□□□ 1.57
UBE2E1-209ENST00000484048 MYO5CQ9NQX4 1742 aa24.85■■□□□ 1.57
UBE2E1-209ENST00000484048 RICTORQ6R327 1708 aa24.84■■□□□ 1.57
UBE2E1-209ENST00000484048 YEATS2Q9ULM3 1422 aa24.82■■□□□ 1.56
UBE2E1-209ENST00000484048 CDC42BPBQ9Y5S2 1711 aa24.81■■□□□ 1.56
UBE2E1-209ENST00000484048 DMRT2Q9Y5R5 561 aa24.81■■□□□ 1.56
UBE2E1-209ENST00000484048 PREX2Q70Z35 1606 aa24.81■■□□□ 1.56
UBE2E1-209ENST00000484048 MYOM3Q5VTT5 1437 aa24.8■■□□□ 1.56
UBE2E1-209ENST00000484048 ZMYM4Q5VZL5 1548 aa24.8■■□□□ 1.56
UBE2E1-209ENST00000484048 ZFYVE16Q7Z3T8 1539 aa24.8■■□□□ 1.56
UBE2E1-209ENST00000484048 SIGLEC1Q9BZZ2 1709 aa24.79■■□□□ 1.56
UBE2E1-209ENST00000484048 FER1L4A9Z1Z3 1794 aa24.77■■□□□ 1.56
UBE2E1-209ENST00000484048 MLECQ14165 292 aa24.77■■□□□ 1.56
UBE2E1-209ENST00000484048 PREX1Q8TCU6 1659 aa24.77■■□□□ 1.56
UBE2E1-209ENST00000484048 CCNB3Q8WWL7 1395 aa24.77■■□□□ 1.56
UBE2E1-209ENST00000484048 GPATCH8Q9UKJ3 1502 aaKnown RBP24.76■■□□□ 1.55
UBE2E1-209ENST00000484048 RRBP1Q9P2E9 1410 aaKnown RBP24.76■■□□□ 1.55
UBE2E1-209ENST00000484048 MAGI2Q86UL8 1455 aa24.75■■□□□ 1.55
UBE2E1-209ENST00000484048 CFAP74Q9C0B2 1584 aa24.75■■□□□ 1.55
UBE2E1-209ENST00000484048 FGD6Q6ZV73 1430 aa24.74■■□□□ 1.55
UBE2E1-209ENST00000484048 PTPN23Q9H3S7 1636 aa24.73■■□□□ 1.55
UBE2E1-209ENST00000484048 MIA2Q96PC5 1412 aa24.72■■□□□ 1.55
UBE2E1-209ENST00000484048 ARHGEF12Q9NZN5 1544 aa24.71■■□□□ 1.55
UBE2E1-209ENST00000484048 STRCQ7RTU9 1775 aa24.7■■□□□ 1.55
UBE2E1-209ENST00000484048 TRIM26Q12899 539 aaPredicted RBP24.69■■□□□ 1.54
UBE2E1-209ENST00000484048 TCOF1Q13428 1488 aaKnown RBP24.67■■□□□ 1.54
UBE2E1-209ENST00000484048 PLCH2O75038 1416 aa24.67■■□□□ 1.54
UBE2E1-209ENST00000484048 UHRF1BP1Q6BDS2 1440 aa24.66■■□□□ 1.54
UBE2E1-209ENST00000484048 PTPRTO14522 1441 aa24.65■■□□□ 1.54
UBE2E1-209ENST00000484048 ARHGAP5Q13017 1502 aa24.65■■□□□ 1.54
UBE2E1-209ENST00000484048 CEBPAP49715 358 aaPredicted RBP24.64■■□□□ 1.54
UBE2E1-209ENST00000484048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.63■■□□□ 1.53
UBE2E1-209ENST00000484048 IQSEC2Q5JU85 1478 aa24.63■■□□□ 1.53
UBE2E1-209ENST00000484048 SAMD9LQ8IVG5 1584 aa24.63■■□□□ 1.53
UBE2E1-209ENST00000484048 CFDP1Q9UEE9 299 aaPredicted RBP24.61■■□□□ 1.53
UBE2E1-209ENST00000484048 CAMSAP2Q08AD1 1489 aa24.61■■□□□ 1.53
UBE2E1-209ENST00000484048 LTBP4Q8N2S1 1624 aa24.6■■□□□ 1.53
UBE2E1-209ENST00000484048 ATP10AO60312 1499 aa24.59■■□□□ 1.53
UBE2E1-209ENST00000484048 C9orf84Q5VXU9 1444 aa24.59■■□□□ 1.53
UBE2E1-209ENST00000484048 SCAPERQ9BY12 1400 aa24.55■■□□□ 1.52
UBE2E1-209ENST00000484048 DNMT1P26358 1616 aaKnown RBP24.55■■□□□ 1.52
UBE2E1-209ENST00000484048 FAM50AQ14320 339 aaKnown RBP24.55■■□□□ 1.52
UBE2E1-209ENST00000484048 CROCC2H7BZ55 1655 aa24.54■■□□□ 1.52
UBE2E1-209ENST00000484048 ABCC1P33527 1531 aa24.53■■□□□ 1.52
UBE2E1-209ENST00000484048 ZNF644Q9H582 1327 aaPredicted RBP24.53■■□□□ 1.52
UBE2E1-209ENST00000484048 EFCAB2Q5VUJ9 269 aa24.52■■□□□ 1.52
UBE2E1-209ENST00000484048 PLEKHH2Q8IVE3 1493 aa24.51■■□□□ 1.51
UBE2E1-209ENST00000484048 ARHGEF5Q12774 1597 aa24.51■■□□□ 1.51
UBE2E1-209ENST00000484048 ZNF777Q9ULD5 760 aaPredicted RBP24.51■■□□□ 1.51
UBE2E1-209ENST00000484048 SYCP2Q9BX26 1530 aa24.5■■□□□ 1.51
UBE2E1-209ENST00000484048 KIAA1107Q9UPP5 1409 aa24.47■■□□□ 1.51
UBE2E1-209ENST00000484048 PCGF6Q9BYE7 350 aa24.47■■□□□ 1.51
UBE2E1-209ENST00000484048 MBD5Q9P267 1494 aa24.46■■□□□ 1.51
UBE2E1-209ENST00000484048 DAPK1P53355 1430 aa24.44■■□□□ 1.5
UBE2E1-209ENST00000484048 NCOA1Q15788 1441 aa24.44■■□□□ 1.5
UBE2E1-209ENST00000484048 ADGBQ8N7X0 1667 aa24.43■■□□□ 1.5
UBE2E1-209ENST00000484048 ABCC5O15440 1437 aa24.43■■□□□ 1.5
UBE2E1-209ENST00000484048 CCDC141Q6ZP82 1450 aa24.41■■□□□ 1.5
UBE2E1-209ENST00000484048 PTPRKQ15262 1439 aa24.41■■□□□ 1.5
UBE2E1-209ENST00000484048 UBAP1LF5GYI3 381 aa24.4■■□□□ 1.5
UBE2E1-209ENST00000484048 SETD1BQ9UPS6 1966 aaKnown RBP24.4■■□□□ 1.5
UBE2E1-209ENST00000484048 SHANK2Q9UPX8 1470 aa24.38■■□□□ 1.49
UBE2E1-209ENST00000484048 TRAPPC8Q9Y2L5 1435 aa24.38■■□□□ 1.49
UBE2E1-209ENST00000484048 C3P01024 1663 aa24.38■■□□□ 1.49
UBE2E1-209ENST00000484048 ITGAEP38570 1179 aa24.38■■□□□ 1.49
UBE2E1-209ENST00000484048 HNRNPMP52272 730 aaKnown RBP eCLIP24.38■■□□□ 1.49
UBE2E1-209ENST00000484048 ZNF518AQ6AHZ1 1483 aa24.38■■□□□ 1.49
UBE2E1-209ENST00000484048 MAST1Q9Y2H9 1570 aa24.37■■□□□ 1.49
UBE2E1-209ENST00000484048 RSPH4AQ5TD94 716 aa24.37■■□□□ 1.49
UBE2E1-209ENST00000484048 REREQ9P2R6 1566 aa24.34■■□□□ 1.49
UBE2E1-209ENST00000484048 GCC2Q8IWJ2 1684 aa24.34■■□□□ 1.49
UBE2E1-209ENST00000484048 KDM5CP41229 1560 aa24.33■■□□□ 1.49
UBE2E1-209ENST00000484048 DIP2CQ9Y2E4 1556 aa24.33■■□□□ 1.48
UBE2E1-209ENST00000484048 ESF1Q9H501 851 aaKnown RBP24.32■■□□□ 1.48
UBE2E1-209ENST00000484048 ZNF335Q9H4Z2 1342 aaPredicted RBP24.32■■□□□ 1.48
UBE2E1-209ENST00000484048 ADGRL2O95490 1459 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms