RNA–Protein interactions for RNA: ENST00000481170.1

GMPPA-211, Transcript of GDP-mannose pyrophosphorylase A, humanhuman

TSL 2

Gene GMPPA, Length 4,942 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMPPA-211ENST00000481170 FTSJ3Q8IY81 847 aaKnown RBP16.77■□□□□ 0.28
GMPPA-211ENST00000481170 ARID4BQ4LE39 1312 aaPredicted RBP16.77■□□□□ 0.28
GMPPA-211ENST00000481170 CASKIN1Q8WXD9 1431 aa16.77■□□□□ 0.28
GMPPA-211ENST00000481170 LRRC9Q6ZRR7 1453 aa16.77■□□□□ 0.27
GMPPA-211ENST00000481170 RAD54L2Q9Y4B4 1467 aa16.76■□□□□ 0.27
GMPPA-211ENST00000481170 FGD6Q6ZV73 1430 aa16.76■□□□□ 0.27
GMPPA-211ENST00000481170 MYOM3Q5VTT5 1437 aa16.75■□□□□ 0.27
GMPPA-211ENST00000481170 PRXQ9BXM0 1461 aa16.74■□□□□ 0.27
GMPPA-211ENST00000481170 PPM1GO15355 546 aaPredicted RBP16.74■□□□□ 0.27
GMPPA-211ENST00000481170 HNRNPMP52272 730 aaKnown RBP eCLIP16.73■□□□□ 0.27
GMPPA-211ENST00000481170 SPAG9O60271 1321 aaKnown RBP16.72■□□□□ 0.27
GMPPA-211ENST00000481170 PTPRGP23470 1445 aa16.72■□□□□ 0.27
GMPPA-211ENST00000481170 FYCO1Q9BQS8 1478 aa16.72■□□□□ 0.27
GMPPA-211ENST00000481170 EFCAB5A4FU69 1503 aa16.72■□□□□ 0.27
GMPPA-211ENST00000481170 MORC1Q86VD1 984 aa16.72■□□□□ 0.27
GMPPA-211ENST00000481170 RRBP1Q9P2E9 1410 aaKnown RBP16.71■□□□□ 0.26
GMPPA-211ENST00000481170 PHLDB1Q86UU1 1377 aa16.7■□□□□ 0.26
GMPPA-211ENST00000481170 NEUROD2Q15784 382 aa16.7■□□□□ 0.26
GMPPA-211ENST00000481170 UACAQ9BZF9 1416 aa16.69■□□□□ 0.26
GMPPA-211ENST00000481170 GGT6Q6P531 493 aa16.68■□□□□ 0.26
GMPPA-211ENST00000481170 PDE3BQ13370 1112 aa16.68■□□□□ 0.26
GMPPA-211ENST00000481170 B4GALNT3Q6L9W6 998 aa16.67■□□□□ 0.26
GMPPA-211ENST00000481170 C14orf37Q86TY3 774 aa16.67■□□□□ 0.26
GMPPA-211ENST00000481170 NLRP13Q86W25 1043 aa16.67■□□□□ 0.26
GMPPA-211ENST00000481170 CCDC144AA2RUR9 1427 aa16.67■□□□□ 0.26
GMPPA-211ENST00000481170 HAP1P54257 671 aaPredicted RBP16.67■□□□□ 0.26
GMPPA-211ENST00000481170 ARAP1Q96P48 1450 aa16.66■□□□□ 0.26
GMPPA-211ENST00000481170 CASC1Q6TDU7 716 aa16.66■□□□□ 0.26
GMPPA-211ENST00000481170 SRPK2P78362 688 aaKnown RBP16.66■□□□□ 0.26
GMPPA-211ENST00000481170 KIF15Q9NS87 1388 aa16.66■□□□□ 0.26
GMPPA-211ENST00000481170 GRIN2BQ13224 1484 aa16.66■□□□□ 0.26
GMPPA-211ENST00000481170 U2SURPO15042 1029 aaKnown RBP16.65■□□□□ 0.26
GMPPA-211ENST00000481170 KIF3BO15066 747 aa16.65■□□□□ 0.26
GMPPA-211ENST00000481170 SENP3Q9H4L4 574 aaPredicted RBP16.65■□□□□ 0.26
GMPPA-211ENST00000481170 SENP3-EIF4A1A0A087X0R7 540 aa16.64■□□□□ 0.25
GMPPA-211ENST00000481170 HDGFL2Q7Z4V5 671 aaPredicted RBP16.64■□□□□ 0.25
GMPPA-211ENST00000481170 GOLGA6L22H0YM25 854 aa16.64■□□□□ 0.25
GMPPA-211ENST00000481170 TNNT2P45379 298 aaPredicted RBP16.64■□□□□ 0.25
GMPPA-211ENST00000481170 FRAT1Q92837 279 aaPredicted RBP16.64■□□□□ 0.25
GMPPA-211ENST00000481170 RBM19Q9Y4C8 960 aaKnown RBP16.64■□□□□ 0.25
GMPPA-211ENST00000481170 RCAN3Q9UKA8 241 aa16.63■□□□□ 0.25
GMPPA-211ENST00000481170 NOP58Q9Y2X3 529 aaKnown RBP16.62■□□□□ 0.25
GMPPA-211ENST00000481170 NCOA2Q15596 1464 aa16.62■□□□□ 0.25
GMPPA-211ENST00000481170 STAC3Q96MF2 364 aa16.6■□□□□ 0.25
GMPPA-211ENST00000481170 LAS1LQ9Y4W2 734 aaKnown RBP16.59■□□□□ 0.25
GMPPA-211ENST00000481170 MYBBP1AQ9BQG0 1328 aaKnown RBP16.59■□□□□ 0.25
GMPPA-211ENST00000481170 CALD1Q05682 793 aaKnown RBP16.59■□□□□ 0.25
GMPPA-211ENST00000481170 TOPBP1Q92547 1522 aa16.58■□□□□ 0.25
GMPPA-211ENST00000481170 RGS3P49796 1198 aa16.58■□□□□ 0.24
GMPPA-211ENST00000481170 CFAP44Q96MT7 982 aa16.58■□□□□ 0.24
GMPPA-211ENST00000481170 TSHZ2Q9NRE2 1034 aa16.58■□□□□ 0.24
GMPPA-211ENST00000481170 ZBTB7CA1YPR0 619 aa16.57■□□□□ 0.24
GMPPA-211ENST00000481170 PEG3Q9GZU2 1588 aa16.57■□□□□ 0.24
GMPPA-211ENST00000481170 USP47Q96K76 1375 aa16.56■□□□□ 0.24
GMPPA-211ENST00000481170 PRKRIP1Q9H875 184 aaPredicted RBP16.56■□□□□ 0.24
GMPPA-211ENST00000481170 DNMBPQ6XZF7 1577 aa16.56■□□□□ 0.24
GMPPA-211ENST00000481170 IPO8O15397 1037 aaKnown RBP16.56■□□□□ 0.24
GMPPA-211ENST00000481170 BICRAQ9NZM4 1560 aa16.56■□□□□ 0.24
GMPPA-211ENST00000481170 TCERG1O14776 1098 aaKnown RBP16.56■□□□□ 0.24
GMPPA-211ENST00000481170 NCLP19338 710 aaKnown RBP16.56■□□□□ 0.24
GMPPA-211ENST00000481170 AQRO60306 1485 aaKnown RBP eCLIP16.56■□□□□ 0.246e-7■■■■■ 42.5
GMPPA-211ENST00000481170 EHBP1L1Q8N3D4 1523 aa16.56■□□□□ 0.24
GMPPA-211ENST00000481170 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.55■□□□□ 0.242e-6■■□□□ 13.2
GMPPA-211ENST00000481170 MRC2Q9UBG0 1479 aa16.55■□□□□ 0.24
GMPPA-211ENST00000481170 ST20-MTHFSA0A0A6YYL1 179 aa16.54■□□□□ 0.24
GMPPA-211ENST00000481170 IFT140Q96RY7 1462 aa16.54■□□□□ 0.24
GMPPA-211ENST00000481170 CC2D2AQ9P2K1 1620 aa16.54■□□□□ 0.24
GMPPA-211ENST00000481170 TERF2IPQ9NYB0 399 aa16.54■□□□□ 0.24
GMPPA-211ENST00000481170 MIA2Q96PC5 1412 aa16.54■□□□□ 0.24
GMPPA-211ENST00000481170 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
GMPPA-211ENST00000481170 WASHC2CQ9Y4E1 1318 aa16.53■□□□□ 0.24
GMPPA-211ENST00000481170 TIAM1Q13009 1591 aa16.53■□□□□ 0.24
GMPPA-211ENST00000481170 GOLGA2Q08379 1002 aa16.52■□□□□ 0.24
GMPPA-211ENST00000481170 ZBED9Q6R2W3 1325 aa16.51■□□□□ 0.23
GMPPA-211ENST00000481170 STK26Q9P289 416 aa16.5■□□□□ 0.23
GMPPA-211ENST00000481170 U2AF1L5P0DN76 240 aaPredicted RBP16.5■□□□□ 0.23
GMPPA-211ENST00000481170 U2AF1Q01081 240 aaKnown RBP eCLIP16.5■□□□□ 0.231e-6■■□□□ 12.9
GMPPA-211ENST00000481170 ANKRD50Q9ULJ7 1429 aa16.49■□□□□ 0.23
GMPPA-211ENST00000481170 MLECQ14165 292 aa16.49■□□□□ 0.23
GMPPA-211ENST00000481170 PRDM2Q13029 1718 aa16.49■□□□□ 0.23
GMPPA-211ENST00000481170 SAFB2Q14151 953 aaKnown RBP eCLIP16.49■□□□□ 0.23
GMPPA-211ENST00000481170 NGEFQ8N5V2 710 aa16.48■□□□□ 0.23
GMPPA-211ENST00000481170 ABCA10Q8WWZ4 1543 aa16.47■□□□□ 0.23
GMPPA-211ENST00000481170 RWDD1Q9H446 243 aaPredicted RBP16.47■□□□□ 0.23
GMPPA-211ENST00000481170 CHMP4AQ9BY43 222 aa16.47■□□□□ 0.23
GMPPA-211ENST00000481170 HECW1Q76N89 1606 aa16.47■□□□□ 0.23
GMPPA-211ENST00000481170 CCDC7Q96M83 1385 aa16.46■□□□□ 0.23
GMPPA-211ENST00000481170 ARXQ96QS3 562 aa16.46■□□□□ 0.23
GMPPA-211ENST00000481170 MAP3K1Q13233 1512 aa16.46■□□□□ 0.22
GMPPA-211ENST00000481170 HFM1A2PYH4 1435 aa16.46■□□□□ 0.22
GMPPA-211ENST00000481170 VGFO15240 615 aaPredicted RBP16.45■□□□□ 0.22
GMPPA-211ENST00000481170 GLIPR1L2Q4G1C9 344 aa16.45■□□□□ 0.22
GMPPA-211ENST00000481170 PMFBP1Q8TBY8 1022 aa16.45■□□□□ 0.22
GMPPA-211ENST00000481170 SYNJ2O15056 1496 aa16.45■□□□□ 0.22
GMPPA-211ENST00000481170 PANK3Q9H999 370 aa16.45■□□□□ 0.22
GMPPA-211ENST00000481170 NESP48681 1621 aa16.45■□□□□ 0.22
GMPPA-211ENST00000481170 RTF1Q92541 710 aaKnown RBP16.44■□□□□ 0.22
GMPPA-211ENST00000481170 TRIM44Q96DX7 344 aaPredicted RBP16.44■□□□□ 0.22
GMPPA-211ENST00000481170 CNTLNQ9NXG0 1405 aa16.44■□□□□ 0.22
GMPPA-211ENST00000481170 ZNF644Q9H582 1327 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms