RNA–Protein interactions for RNA: ENST00000480001.5

RARB-207, Transcript of retinoic acid receptor beta, humanhuman

TSL 3

Gene RARB, Length 1,191 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-207ENST00000480001 ARHGEF12Q9NZN5 1544 aa13.32□□□□□ -0.28
RARB-207ENST00000480001 SETD1BQ9UPS6 1966 aaKnown RBP13.31□□□□□ -0.28
RARB-207ENST00000480001 CFAP74Q9C0B2 1584 aa13.31□□□□□ -0.28
RARB-207ENST00000480001 UBAP1LF5GYI3 381 aa13.3□□□□□ -0.28
RARB-207ENST00000480001 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.3□□□□□ -0.28
RARB-207ENST00000480001 HNRNPUL2Q1KMD3 747 aaKnown RBP13.3□□□□□ -0.28
RARB-207ENST00000480001 CTTNBP2Q8WZ74 1663 aa13.29□□□□□ -0.28
RARB-207ENST00000480001 CEBPAP49715 358 aaPredicted RBP13.29□□□□□ -0.28
RARB-207ENST00000480001 ATP10AO60312 1499 aa13.27□□□□□ -0.29
RARB-207ENST00000480001 PLEKHD1A6NEE1 506 aa13.26□□□□□ -0.29
RARB-207ENST00000480001 C9orf84Q5VXU9 1444 aa13.25□□□□□ -0.29
RARB-207ENST00000480001 SIGLEC1Q9BZZ2 1709 aa13.24□□□□□ -0.29
RARB-207ENST00000480001 HECW1Q76N89 1606 aa13.23□□□□□ -0.29
RARB-207ENST00000480001 NCOA1Q15788 1441 aa13.22□□□□□ -0.29
RARB-207ENST00000480001 MED1Q15648 1581 aaPredicted RBP13.21□□□□□ -0.29
RARB-207ENST00000480001 TRAPPC8Q9Y2L5 1435 aa13.21□□□□□ -0.3
RARB-207ENST00000480001 P3H3Q8IVL6 736 aa13.2□□□□□ -0.3
RARB-207ENST00000480001 ESF1Q9H501 851 aaKnown RBP13.2□□□□□ -0.3
RARB-207ENST00000480001 SCAPERQ9BY12 1400 aa13.2□□□□□ -0.3
RARB-207ENST00000480001 RAPGEF6Q8TEU7 1601 aa13.2□□□□□ -0.3
RARB-207ENST00000480001 TOM1O60784 492 aa13.16□□□□□ -0.3
RARB-207ENST00000480001 HSPA1LP34931 641 aa13.16□□□□□ -0.3
RARB-207ENST00000480001 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.16□□□□□ -0.3
RARB-207ENST00000480001 NUP153P49790 1475 aaKnown RBP13.16□□□□□ -0.3
RARB-207ENST00000480001 ZNF335Q9H4Z2 1342 aaPredicted RBP13.15□□□□□ -0.3
RARB-207ENST00000480001 PKD2Q13563 968 aa13.15□□□□□ -0.3
RARB-207ENST00000480001 MSH5O43196 834 aa13.14□□□□□ -0.31
RARB-207ENST00000480001 PLCH2O75038 1416 aa13.13□□□□□ -0.31
RARB-207ENST00000480001 EFCAB2Q5VUJ9 269 aa13.13□□□□□ -0.31
RARB-207ENST00000480001 CNTLNQ9NXG0 1405 aa13.13□□□□□ -0.31
RARB-207ENST00000480001 PRXQ9BXM0 1461 aa13.12□□□□□ -0.31
RARB-207ENST00000480001 SCAF1Q9H7N4 1312 aaKnown RBP13.12□□□□□ -0.31
RARB-207ENST00000480001 CAMSAP1Q5T5Y3 1602 aa13.11□□□□□ -0.31
RARB-207ENST00000480001 PPP6R1Q9UPN7 881 aa13.11□□□□□ -0.31
RARB-207ENST00000480001 C3P01024 1663 aa13.11□□□□□ -0.31
RARB-207ENST00000480001 SAMD9Q5K651 1589 aa13.11□□□□□ -0.31
RARB-207ENST00000480001 REREQ9P2R6 1566 aa13.11□□□□□ -0.31
RARB-207ENST00000480001 ZNF518AQ6AHZ1 1483 aa13.1□□□□□ -0.31
RARB-207ENST00000480001 AGLP35573 1532 aa13.1□□□□□ -0.31
RARB-207ENST00000480001 NPATQ14207 1427 aa13.1□□□□□ -0.31
RARB-207ENST00000480001 NCKAP5LQ9HCH0 1330 aa13.1□□□□□ -0.31
RARB-207ENST00000480001 PIP4K2BP78356 416 aa13.09□□□□□ -0.31
RARB-207ENST00000480001 MYT1LQ9UL68 1186 aa13.09□□□□□ -0.31
RARB-207ENST00000480001 PLA2R1Q13018 1463 aa13.09□□□□□ -0.31
RARB-207ENST00000480001 PIAS4Q8N2W9 510 aaPredicted RBP13.08□□□□□ -0.32
RARB-207ENST00000480001 AFAP1Q8N556 730 aa13.04□□□□□ -0.32
RARB-207ENST00000480001 PTPRKQ15262 1439 aa13.04□□□□□ -0.32
RARB-207ENST00000480001 TCOF1Q13428 1488 aaKnown RBP13.04□□□□□ -0.32
RARB-207ENST00000480001 CPS1P31327 1500 aa13.03□□□□□ -0.32
RARB-207ENST00000480001 KDM5CP41229 1560 aa13.03□□□□□ -0.32
RARB-207ENST00000480001 ADRA2BP18089 450 aa13.03□□□□□ -0.32
RARB-207ENST00000480001 MLH3Q9UHC1 1453 aa13.03□□□□□ -0.32
RARB-207ENST00000480001 DIP2CQ9Y2E4 1556 aa13.02□□□□□ -0.33
RARB-207ENST00000480001 ZMYM3Q14202 1370 aa13□□□□□ -0.33
RARB-207ENST00000480001 CDK11AQ9UQ88 783 aaPredicted RBP13□□□□□ -0.33
RARB-207ENST00000480001 MROH2AA6NES4 1674 aa12.99□□□□□ -0.33
RARB-207ENST00000480001 MYO5CQ9NQX4 1742 aa12.97□□□□□ -0.33
RARB-207ENST00000480001 SHANK2Q9UPX8 1470 aa12.97□□□□□ -0.33
RARB-207ENST00000480001 ZNF142P52746 1687 aaPredicted RBP12.96□□□□□ -0.34
RARB-207ENST00000480001 RGS17Q9UGC6 210 aaPredicted RBP12.95□□□□□ -0.34
RARB-207ENST00000480001 ABCA6Q8N139 1617 aa12.95□□□□□ -0.34
RARB-207ENST00000480001 CEP170BQ9Y4F5 1589 aaPredicted RBP12.94□□□□□ -0.34
RARB-207ENST00000480001 ARHGAP5Q13017 1502 aa12.94□□□□□ -0.34
RARB-207ENST00000480001 MYO3AQ8NEV4 1616 aa12.92□□□□□ -0.34
RARB-207ENST00000480001 SUPT6HQ7KZ85 1726 aaKnown RBP12.91□□□□□ -0.34
RARB-207ENST00000480001 CDK13Q14004 1512 aaKnown RBP12.91□□□□□ -0.34
RARB-207ENST00000480001 RANGAP1P46060 587 aaPredicted RBP12.89□□□□□ -0.35
RARB-207ENST00000480001 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
RARB-207ENST00000480001 A2ML1A8K2U0 1454 aa12.89□□□□□ -0.35
RARB-207ENST00000480001 CLIP1P30622 1438 aa12.88□□□□□ -0.35
RARB-207ENST00000480001 KIF14Q15058 1648 aa12.88□□□□□ -0.35
RARB-207ENST00000480001 ANKLE2Q86XL3 938 aa12.87□□□□□ -0.35
RARB-207ENST00000480001 TROQ12816 1431 aaPredicted RBP12.87□□□□□ -0.35
RARB-207ENST00000480001 ALKQ9UM73 1620 aa12.85□□□□□ -0.35
RARB-207ENST00000480001 POTEAQ6S8J7 498 aa12.85□□□□□ -0.35
RARB-207ENST00000480001 DNMT1P26358 1616 aaKnown RBP12.84□□□□□ -0.35
RARB-207ENST00000480001 KIDINS220Q9ULH0 1771 aa12.84□□□□□ -0.35
RARB-207ENST00000480001 ABCC1P33527 1531 aa12.84□□□□□ -0.35
RARB-207ENST00000480001 ATP1B4Q9UN42 357 aaPredicted RBP12.84□□□□□ -0.35
RARB-207ENST00000480001 VWDEQ8N2E2 1590 aa12.83□□□□□ -0.36
RARB-207ENST00000480001 THEMISQ8N1K5 641 aaPredicted RBP12.83□□□□□ -0.36
RARB-207ENST00000480001 CLTCQ00610 1675 aaKnown RBP12.83□□□□□ -0.36
RARB-207ENST00000480001 POLR1AO95602 1720 aaPredicted RBP12.82□□□□□ -0.36
RARB-207ENST00000480001 NEURL4Q96JN8 1562 aa12.82□□□□□ -0.36
RARB-207ENST00000480001 FMN1Q68DA7 1419 aa12.82□□□□□ -0.36
RARB-207ENST00000480001 SPAG9O60271 1321 aaKnown RBP12.82□□□□□ -0.36
RARB-207ENST00000480001 GGT6Q6P531 493 aa12.81□□□□□ -0.36
RARB-207ENST00000480001 ITSN2Q9NZM3 1697 aa12.8□□□□□ -0.36
RARB-207ENST00000480001 MED14O60244 1454 aa12.8□□□□□ -0.36
RARB-207ENST00000480001 RNF17Q9BXT8 1623 aaKnown RBP12.8□□□□□ -0.36
RARB-207ENST00000480001 NPHP4O75161 1426 aaPredicted RBP12.79□□□□□ -0.36
RARB-207ENST00000480001 LRRC7Q96NW7 1537 aa12.79□□□□□ -0.36
RARB-207ENST00000480001 CDC42BPBQ9Y5S2 1711 aa12.79□□□□□ -0.36
RARB-207ENST00000480001 TNRQ92752 1358 aa12.78□□□□□ -0.36
RARB-207ENST00000480001 A2MP01023 1474 aa12.78□□□□□ -0.36
RARB-207ENST00000480001 SYNMO15061 1565 aa12.77□□□□□ -0.36
RARB-207ENST00000480001 SAMD9LQ8IVG5 1584 aa12.77□□□□□ -0.36
RARB-207ENST00000480001 PREX2Q70Z35 1606 aa12.77□□□□□ -0.36
RARB-207ENST00000480001 UPF1Q92900 1129 aaKnown RBP eCLIP12.76□□□□□ -0.37
RARB-207ENST00000480001 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms