RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 MAP3K1Q13233 1512 aa23.79■■□□□ 1.4
COL16A1-211ENST00000479100 LRRC9Q6ZRR7 1453 aa23.77■■□□□ 1.4
COL16A1-211ENST00000479100 CCNB3Q8WWL7 1395 aa23.73■■□□□ 1.39
COL16A1-211ENST00000479100 HECW2Q9P2P5 1572 aa23.73■■□□□ 1.39
COL16A1-211ENST00000479100 MYO5CQ9NQX4 1742 aa23.72■■□□□ 1.39
COL16A1-211ENST00000479100 RICTORQ6R327 1708 aa23.71■■□□□ 1.39
COL16A1-211ENST00000479100 ADAMTSL3P82987 1691 aa23.71■■□□□ 1.39
COL16A1-211ENST00000479100 CFAP74Q9C0B2 1584 aa23.71■■□□□ 1.39
COL16A1-211ENST00000479100 EFCAB2Q5VUJ9 269 aa23.71■■□□□ 1.39
COL16A1-211ENST00000479100 ZMYM4Q5VZL5 1548 aa23.7■■□□□ 1.38
COL16A1-211ENST00000479100 ARHGEF40Q8TER5 1519 aa23.7■■□□□ 1.38
COL16A1-211ENST00000479100 SCAPERQ9BY12 1400 aa23.7■■□□□ 1.38
COL16A1-211ENST00000479100 ARHGAP5Q13017 1502 aa23.69■■□□□ 1.38
COL16A1-211ENST00000479100 PTPRMP28827 1452 aa23.69■■□□□ 1.38
COL16A1-211ENST00000479100 SUPT6HQ7KZ85 1726 aaKnown RBP23.69■■□□□ 1.38
COL16A1-211ENST00000479100 NCOA2Q15596 1464 aa23.68■■□□□ 1.38
COL16A1-211ENST00000479100 YEATS2Q9ULM3 1422 aa23.68■■□□□ 1.38
COL16A1-211ENST00000479100 MAGI2Q86UL8 1455 aa23.68■■□□□ 1.38
COL16A1-211ENST00000479100 POGZQ7Z3K3 1410 aa23.67■■□□□ 1.38
COL16A1-211ENST00000479100 ARID4BQ4LE39 1312 aaPredicted RBP23.67■■□□□ 1.38
COL16A1-211ENST00000479100 ZNF777Q9ULD5 760 aaPredicted RBP23.67■■□□□ 1.38
COL16A1-211ENST00000479100 GPATCH8Q9UKJ3 1502 aaKnown RBP23.66■■□□□ 1.38
COL16A1-211ENST00000479100 CFDP1Q9UEE9 299 aaPredicted RBP23.65■■□□□ 1.38
COL16A1-211ENST00000479100 PREX2Q70Z35 1606 aa23.64■■□□□ 1.38
COL16A1-211ENST00000479100 PPARGC1BQ86YN6 1023 aaKnown RBP23.64■■□□□ 1.37
COL16A1-211ENST00000479100 CDC42BPAQ5VT25 1732 aa23.64■■□□□ 1.37
COL16A1-211ENST00000479100 BCORL1Q5H9F3 1711 aa23.63■■□□□ 1.37
COL16A1-211ENST00000479100 CDC42BPBQ9Y5S2 1711 aa23.62■■□□□ 1.37
COL16A1-211ENST00000479100 ZFYVE16Q7Z3T8 1539 aa23.62■■□□□ 1.37
COL16A1-211ENST00000479100 MADDQ8WXG6 1647 aa23.58■■□□□ 1.36
COL16A1-211ENST00000479100 AFAP1Q8N556 730 aa23.56■■□□□ 1.36
COL16A1-211ENST00000479100 ITSN2Q9NZM3 1697 aa23.56■■□□□ 1.36
COL16A1-211ENST00000479100 SIGLEC1Q9BZZ2 1709 aa23.55■■□□□ 1.36
COL16A1-211ENST00000479100 ATP10AO60312 1499 aa23.54■■□□□ 1.36
COL16A1-211ENST00000479100 ZNF644Q9H582 1327 aaPredicted RBP23.54■■□□□ 1.36
COL16A1-211ENST00000479100 ZNF518AQ6AHZ1 1483 aa23.53■■□□□ 1.36
COL16A1-211ENST00000479100 MYOM3Q5VTT5 1437 aa23.51■■□□□ 1.35
COL16A1-211ENST00000479100 HNRNPMP52272 730 aaKnown RBP eCLIP23.51■■□□□ 1.35
COL16A1-211ENST00000479100 SAMD9LQ8IVG5 1584 aa23.51■■□□□ 1.35
COL16A1-211ENST00000479100 ILDR1Q86SU0 546 aaPredicted RBP23.5■■□□□ 1.35
COL16A1-211ENST00000479100 C9orf84Q5VXU9 1444 aa23.5■■□□□ 1.35
COL16A1-211ENST00000479100 KDM5CP41229 1560 aa23.49■■□□□ 1.35
COL16A1-211ENST00000479100 ABCC1P33527 1531 aa23.49■■□□□ 1.35
COL16A1-211ENST00000479100 ARHGEF12Q9NZN5 1544 aa23.49■■□□□ 1.35
COL16A1-211ENST00000479100 MLECQ14165 292 aa23.48■■□□□ 1.35
COL16A1-211ENST00000479100 MYT1LQ9UL68 1186 aa23.47■■□□□ 1.35
COL16A1-211ENST00000479100 PLEKHH2Q8IVE3 1493 aa23.47■■□□□ 1.35
COL16A1-211ENST00000479100 LMTK3Q96Q04 1460 aa23.47■■□□□ 1.35
COL16A1-211ENST00000479100 TRAPPC8Q9Y2L5 1435 aa23.46■■□□□ 1.35
COL16A1-211ENST00000479100 SYCP2Q9BX26 1530 aa23.45■■□□□ 1.34
COL16A1-211ENST00000479100 MLH3Q9UHC1 1453 aa23.45■■□□□ 1.34
COL16A1-211ENST00000479100 CAMSAP2Q08AD1 1489 aa23.44■■□□□ 1.34
COL16A1-211ENST00000479100 MIA2Q96PC5 1412 aa23.44■■□□□ 1.34
COL16A1-211ENST00000479100 RIMS1Q86UR5 1692 aaKnown RBP23.44■■□□□ 1.34
COL16A1-211ENST00000479100 KIAA1107Q9UPP5 1409 aa23.43■■□□□ 1.34
COL16A1-211ENST00000479100 FGD6Q6ZV73 1430 aa23.41■■□□□ 1.34
COL16A1-211ENST00000479100 DIP2CQ9Y2E4 1556 aa23.38■■□□□ 1.33
COL16A1-211ENST00000479100 REREQ9P2R6 1566 aa23.37■■□□□ 1.33
COL16A1-211ENST00000479100 FAM50AQ14320 339 aaKnown RBP23.37■■□□□ 1.33
COL16A1-211ENST00000479100 PLPPR3Q6T4P5 718 aa23.37■■□□□ 1.33
COL16A1-211ENST00000479100 PTPN23Q9H3S7 1636 aa23.37■■□□□ 1.33
COL16A1-211ENST00000479100 SPAG9O60271 1321 aaKnown RBP23.36■■□□□ 1.33
COL16A1-211ENST00000479100 MBD5Q9P267 1494 aa23.36■■□□□ 1.33
COL16A1-211ENST00000479100 HSPA2P54652 639 aa23.34■■□□□ 1.33
COL16A1-211ENST00000479100 RSPH4AQ5TD94 716 aa23.33■■□□□ 1.33
COL16A1-211ENST00000479100 ABCA6Q8N139 1617 aa23.33■■□□□ 1.32
COL16A1-211ENST00000479100 CEBPAP49715 358 aaPredicted RBP23.32■■□□□ 1.32
COL16A1-211ENST00000479100 AGLP35573 1532 aa23.32■■□□□ 1.32
COL16A1-211ENST00000479100 CCDC141Q6ZP82 1450 aa23.31■■□□□ 1.32
COL16A1-211ENST00000479100 TSPY4P0CV99 314 aa23.31■■□□□ 1.32
COL16A1-211ENST00000479100 TSPY10P0CW01 314 aa23.31■■□□□ 1.32
COL16A1-211ENST00000479100 TCOF1Q13428 1488 aaKnown RBP23.3■■□□□ 1.32
COL16A1-211ENST00000479100 FER1L4A9Z1Z3 1794 aa23.29■■□□□ 1.32
COL16A1-211ENST00000479100 ARHGEF5Q12774 1597 aa23.28■■□□□ 1.32
COL16A1-211ENST00000479100 KIDINS220Q9ULH0 1771 aa23.27■■□□□ 1.32
COL16A1-211ENST00000479100 ATP7AQ04656 1500 aa23.25■■□□□ 1.31
COL16A1-211ENST00000479100 ABCC5O15440 1437 aa23.22■■□□□ 1.31
COL16A1-211ENST00000479100 INO80Q9ULG1 1556 aaPredicted RBP23.22■■□□□ 1.31
COL16A1-211ENST00000479100 ITGAEP38570 1179 aa23.21■■□□□ 1.31
COL16A1-211ENST00000479100 CHIC2Q9UKJ5 165 aa23.21■■□□□ 1.31
COL16A1-211ENST00000479100 RTEL1-TNFRSF6BF6WH68 1400 aa23.21■■□□□ 1.31
COL16A1-211ENST00000479100 DAPK1P53355 1430 aa23.21■■□□□ 1.31
COL16A1-211ENST00000479100 FBXO41Q8TF61 875 aa23.19■■□□□ 1.3
COL16A1-211ENST00000479100 DNMT1P26358 1616 aaKnown RBP23.19■■□□□ 1.3
COL16A1-211ENST00000479100 RRBP1Q9P2E9 1410 aaKnown RBP23.16■■□□□ 1.3
COL16A1-211ENST00000479100 CNTLNQ9NXG0 1405 aa23.16■■□□□ 1.3
COL16A1-211ENST00000479100 MAST1Q9Y2H9 1570 aa23.14■■□□□ 1.3
COL16A1-211ENST00000479100 SHANK2Q9UPX8 1470 aa23.14■■□□□ 1.29
COL16A1-211ENST00000479100 ESF1Q9H501 851 aaKnown RBP23.14■■□□□ 1.29
COL16A1-211ENST00000479100 UHRF1BP1Q6BDS2 1440 aa23.14■■□□□ 1.29
COL16A1-211ENST00000479100 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.14■■□□□ 1.29
COL16A1-211ENST00000479100 CROCC2H7BZ55 1655 aa23.13■■□□□ 1.29
COL16A1-211ENST00000479100 A2MP01023 1474 aa23.13■■□□□ 1.29
COL16A1-211ENST00000479100 RRP7BPQ9NSQ0 103 aa23.13■■□□□ 1.29
COL16A1-211ENST00000479100 PLXNC1O60486 1568 aa23.13■■□□□ 1.29
COL16A1-211ENST00000479100 PREX1Q8TCU6 1659 aa23.12■■□□□ 1.29
COL16A1-211ENST00000479100 ZMYM3Q14202 1370 aa23.1■■□□□ 1.29
COL16A1-211ENST00000479100 ADGBQ8N7X0 1667 aa23.09■■□□□ 1.29
COL16A1-211ENST00000479100 DHX29Q7Z478 1369 aaKnown RBP23.09■■□□□ 1.29
COL16A1-211ENST00000479100 ANKRD30AQ9BXX3 1397 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms