RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 POTEGQ6S5H5 508 aa9.62□□□□□ -0.87
SMARCA1-204ENST00000478420 TMEM121BQ9BXQ6 578 aaPredicted RBP9.62□□□□□ -0.87
SMARCA1-204ENST00000478420 PDE4AP27815 886 aa9.61□□□□□ -0.87
SMARCA1-204ENST00000478420 CRISPLD2Q9H0B8 497 aa9.59□□□□□ -0.87
SMARCA1-204ENST00000478420 NCKAP5LQ9HCH0 1330 aa9.58□□□□□ -0.88
SMARCA1-204ENST00000478420 POTEB2H3BUK9 544 aa9.58□□□□□ -0.88
SMARCA1-204ENST00000478420 LARP6Q9BRS8 491 aaKnown RBP9.58□□□□□ -0.88
SMARCA1-204ENST00000478420 C3orf67Q6ZVT6 689 aa9.56□□□□□ -0.88
SMARCA1-204ENST00000478420 TMC2Q8TDI7 906 aa9.56□□□□□ -0.88
SMARCA1-204ENST00000478420 GPHNQ9NQX3 736 aaPredicted RBP9.56□□□□□ -0.88
SMARCA1-204ENST00000478420 DDX27Q96GQ7 796 aaKnown RBP9.54□□□□□ -0.88
SMARCA1-204ENST00000478420 MFSD10Q14728 455 aa9.53□□□□□ -0.88
SMARCA1-204ENST00000478420 P3H3Q8IVL6 736 aa9.52□□□□□ -0.89
SMARCA1-204ENST00000478420 C2orf72A6NCS6 295 aa9.51□□□□□ -0.89
SMARCA1-204ENST00000478420 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.51□□□□□ -0.89
SMARCA1-204ENST00000478420 POTEJP0CG39 1038 aa9.5□□□□□ -0.89
SMARCA1-204ENST00000478420 E2F4Q16254 413 aa9.5□□□□□ -0.89
SMARCA1-204ENST00000478420 PPP1R15BQ5SWA1 713 aa9.5□□□□□ -0.89
SMARCA1-204ENST00000478420 PCDH10Q9P2E7 1040 aa9.5□□□□□ -0.89
SMARCA1-204ENST00000478420 KIF3CO14782 793 aa9.48□□□□□ -0.89
SMARCA1-204ENST00000478420 FOXK1P85037 733 aa9.48□□□□□ -0.89
SMARCA1-204ENST00000478420 DSG2Q14126 1118 aa9.48□□□□□ -0.89
SMARCA1-204ENST00000478420 TMEM92Q6UXU6 159 aa9.48□□□□□ -0.89
SMARCA1-204ENST00000478420 KCNV2Q8TDN2 545 aa9.47□□□□□ -0.89
SMARCA1-204ENST00000478420 BCANQ96GW7 911 aa9.47□□□□□ -0.89
SMARCA1-204ENST00000478420 MAMSTRQ6ZN01 415 aa9.46□□□□□ -0.9
SMARCA1-204ENST00000478420 PLPP6Q8IY26 295 aa9.45□□□□□ -0.9
SMARCA1-204ENST00000478420 SCUBE2Q9NQ36 999 aa9.45□□□□□ -0.9
SMARCA1-204ENST00000478420 NBR1Q14596 966 aa9.44□□□□□ -0.9
SMARCA1-204ENST00000478420 CAMK2BQ13554 666 aa9.43□□□□□ -0.9
SMARCA1-204ENST00000478420 ARHGEF1Q92888 912 aaKnown RBP9.42□□□□□ -0.9
SMARCA1-204ENST00000478420 SLAIN1Q8ND83 568 aa9.39□□□□□ -0.91
SMARCA1-204ENST00000478420 ARIH1Q9Y4X5 557 aaPredicted RBP9.37□□□□□ -0.91
SMARCA1-204ENST00000478420 EMILIN3Q9NT22 766 aa9.36□□□□□ -0.91
SMARCA1-204ENST00000478420 DPYSL4O14531 572 aa9.33□□□□□ -0.92
SMARCA1-204ENST00000478420 LCE2DQ5TA82 110 aaPredicted RBP9.33□□□□□ -0.92
SMARCA1-204ENST00000478420 UPF1Q92900 1129 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMARCA1-204ENST00000478420 FAM163AQ96GL9 167 aaPredicted RBP9.33□□□□□ -0.92
SMARCA1-204ENST00000478420 MAP3K9P80192 1104 aa9.32□□□□□ -0.92
SMARCA1-204ENST00000478420 SLC34A2O95436 690 aa9.31□□□□□ -0.92
SMARCA1-204ENST00000478420 OXER1Q8TDS5 423 aa9.31□□□□□ -0.92
SMARCA1-204ENST00000478420 TBC1D12O60347 775 aa9.3□□□□□ -0.92
SMARCA1-204ENST00000478420 SPDYE16A6NNV3 312 aaPredicted RBP9.29□□□□□ -0.92
SMARCA1-204ENST00000478420 PTCD2Q8WV60 388 aaKnown RBP9.29□□□□□ -0.92
SMARCA1-204ENST00000478420 DOK7Q18PE1 504 aa9.28□□□□□ -0.92
SMARCA1-204ENST00000478420 RIMBP2O15034 1052 aa9.27□□□□□ -0.93
SMARCA1-204ENST00000478420 SEMA3EO15041 775 aa9.27□□□□□ -0.93
SMARCA1-204ENST00000478420 PDIA6Q15084 440 aa9.27□□□□□ -0.93
SMARCA1-204ENST00000478420 SNPHO15079 494 aa9.26□□□□□ -0.93
SMARCA1-204ENST00000478420 ZNF316A6NFI3 1004 aaPredicted RBP9.25□□□□□ -0.93
SMARCA1-204ENST00000478420 TULP1O00294 542 aaPredicted RBP9.25□□□□□ -0.93
SMARCA1-204ENST00000478420 HOXB3P14651 431 aaPredicted RBP9.25□□□□□ -0.93
SMARCA1-204ENST00000478420 PCDHGA4Q9Y5G9 962 aa9.25□□□□□ -0.93
SMARCA1-204ENST00000478420 TESPA1A2RU30 521 aaPredicted RBP9.24□□□□□ -0.93
SMARCA1-204ENST00000478420 ZNF710Q8N1W2 664 aa9.24□□□□□ -0.93
SMARCA1-204ENST00000478420 EVI5O60447 810 aa9.23□□□□□ -0.93
SMARCA1-204ENST00000478420 SMYD5Q6GMV2 418 aa9.23□□□□□ -0.93
SMARCA1-204ENST00000478420 ZSWIM6Q9HCJ5 1215 aa9.22□□□□□ -0.93
SMARCA1-204ENST00000478420 ARSIQ5FYB1 569 aa9.19□□□□□ -0.94
SMARCA1-204ENST00000478420 MLLT3P42568 568 aaPredicted RBP9.18□□□□□ -0.94
SMARCA1-204ENST00000478420 ANO8Q9HCE9 1232 aaPredicted RBP9.18□□□□□ -0.94
SMARCA1-204ENST00000478420 GRXCR2A6NFK2 248 aa9.17□□□□□ -0.94
SMARCA1-204ENST00000478420 PTGER2P43116 358 aa9.17□□□□□ -0.94
SMARCA1-204ENST00000478420 GPR153Q6NV75 609 aa9.17□□□□□ -0.94
SMARCA1-204ENST00000478420 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMARCA1-204ENST00000478420 CDAN1Q8IWY9 1227 aa9.17□□□□□ -0.94
SMARCA1-204ENST00000478420 LMOD2Q6P5Q4 547 aa9.16□□□□□ -0.94
SMARCA1-204ENST00000478420 NUDT7P0C024 238 aa9.15□□□□□ -0.94
SMARCA1-204ENST00000478420 DDX12PQ92771 950 aa9.15□□□□□ -0.94
SMARCA1-204ENST00000478420 KHSRPQ92945 711 aaKnown RBP eCLIP9.15□□□□□ -0.942e-7■■□□□ 12.7
SMARCA1-204ENST00000478420 KDM4FA0A1W2PPD8 638 aa9.14□□□□□ -0.95
SMARCA1-204ENST00000478420 HOXB1P14653 301 aaPredicted RBP9.13□□□□□ -0.95
SMARCA1-204ENST00000478420 PHF14O94880 888 aa9.1□□□□□ -0.95
SMARCA1-204ENST00000478420 TPRNQ4KMQ1 711 aa9.1□□□□□ -0.95
SMARCA1-204ENST00000478420 RBM26Q5T8P6 1007 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-204ENST00000478420 EPAS1Q99814 870 aa9.1□□□□□ -0.95
SMARCA1-204ENST00000478420 OSBPP22059 807 aa9.09□□□□□ -0.95
SMARCA1-204ENST00000478420 JPH4Q96JJ6 628 aa9.09□□□□□ -0.95
SMARCA1-204ENST00000478420 LHX6Q9UPM6 363 aa9.08□□□□□ -0.96
SMARCA1-204ENST00000478420 PCDHGA10Q9Y5H3 936 aa9.08□□□□□ -0.96
SMARCA1-204ENST00000478420 PSDA5PKW4 1024 aaPredicted RBP9.07□□□□□ -0.96
SMARCA1-204ENST00000478420 ST18O60284 1047 aa9.07□□□□□ -0.96
SMARCA1-204ENST00000478420 FOSBP53539 338 aa9.07□□□□□ -0.96
SMARCA1-204ENST00000478420 TYW1BQ6NUM6 668 aa9.07□□□□□ -0.96
SMARCA1-204ENST00000478420 ZNF454Q8N9F8 522 aa9.07□□□□□ -0.96
SMARCA1-204ENST00000478420 FBXW7Q969H0 707 aa9.06□□□□□ -0.96
SMARCA1-204ENST00000478420 NUTM2FA1L443 756 aa9.05□□□□□ -0.96
SMARCA1-204ENST00000478420 GPIHBP1Q8IV16 184 aa9.05□□□□□ -0.96
SMARCA1-204ENST00000478420 MAP3K7O43318 606 aa9.04□□□□□ -0.96
SMARCA1-204ENST00000478420 PRKCSHP14314 528 aaPredicted RBP9.04□□□□□ -0.96
SMARCA1-204ENST00000478420 EN1Q05925 392 aaPredicted RBP9.04□□□□□ -0.96
SMARCA1-204ENST00000478420 PPP4R3BQ5MIZ7 849 aa9.04□□□□□ -0.96
SMARCA1-204ENST00000478420 ZDHHC16Q969W1 377 aa9.04□□□□□ -0.96
SMARCA1-204ENST00000478420 ZC3H15Q8WU90 426 aaKnown RBP9.03□□□□□ -0.96
SMARCA1-204ENST00000478420 RBM33Q96EV2 1170 aaKnown RBP9.03□□□□□ -0.96
SMARCA1-204ENST00000478420 PRIM1P49642 420 aaKnown RBP9.02□□□□□ -0.97
SMARCA1-204ENST00000478420 EMP3P54852 163 aa9.01□□□□□ -0.97
SMARCA1-204ENST00000478420 ERBB3P21860 1342 aa9.01□□□□□ -0.97
SMARCA1-204ENST00000478420 MMRN1Q13201 1228 aa9□□□□□ -0.97
SMARCA1-204ENST00000478420 MARVELD3Q96A59 401 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms