RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 EPRSP07814 1512 aaKnown RBP18.16■□□□□ 0.5
CBWD3-206ENST00000478048 MAPKBP1O60336 1514 aa18.12■□□□□ 0.49
CBWD3-206ENST00000478048 ASXL2Q76L83 1435 aa18.12■□□□□ 0.49
CBWD3-206ENST00000478048 CCDC18Q5T9S5 1454 aa18.08■□□□□ 0.49
CBWD3-206ENST00000478048 WDR7Q9Y4E6 1490 aa18.07■□□□□ 0.48
CBWD3-206ENST00000478048 AKT1S1Q96B36 256 aa18.06■□□□□ 0.48
CBWD3-206ENST00000478048 PLEKHD1A6NEE1 506 aa18.05■□□□□ 0.48
CBWD3-206ENST00000478048 CHRDL2Q6WN34 429 aa18.05■□□□□ 0.48
CBWD3-206ENST00000478048 KCNH8Q96L42 1107 aa18.04■□□□□ 0.48
CBWD3-206ENST00000478048 MAGI3Q5TCQ9 1506 aa18.04■□□□□ 0.48
CBWD3-206ENST00000478048 ABCC10Q5T3U5 1492 aa18.02■□□□□ 0.48
CBWD3-206ENST00000478048 CDK11AQ9UQ88 783 aaPredicted RBP18.02■□□□□ 0.48
CBWD3-206ENST00000478048 TIAM1Q13009 1591 aa18.02■□□□□ 0.47
CBWD3-206ENST00000478048 DIP2BQ9P265 1576 aa18.01■□□□□ 0.47
CBWD3-206ENST00000478048 CFAP43Q8NDM7 1665 aa18.01■□□□□ 0.47
CBWD3-206ENST00000478048 KIF13AQ9H1H9 1805 aa18■□□□□ 0.47
CBWD3-206ENST00000478048 FAM69CQ0P6D2 419 aa18■□□□□ 0.47
CBWD3-206ENST00000478048 TROQ12816 1431 aaPredicted RBP17.99■□□□□ 0.47
CBWD3-206ENST00000478048 KANK4Q5T7N3 995 aaPredicted RBP17.98■□□□□ 0.47
CBWD3-206ENST00000478048 MAP3K1Q13233 1512 aa17.97■□□□□ 0.47
CBWD3-206ENST00000478048 MTUS2Q5JR59 1369 aa17.96■□□□□ 0.47
CBWD3-206ENST00000478048 KIF14Q15058 1648 aa17.95■□□□□ 0.46
CBWD3-206ENST00000478048 GLI2P10070 1586 aa17.94■□□□□ 0.46
CBWD3-206ENST00000478048 LRRC9Q6ZRR7 1453 aa17.94■□□□□ 0.46
CBWD3-206ENST00000478048 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.93■□□□□ 0.46
CBWD3-206ENST00000478048 EHBP1L1Q8N3D4 1523 aa17.92■□□□□ 0.46
CBWD3-206ENST00000478048 ABCA9Q8IUA7 1624 aa17.91■□□□□ 0.46
CBWD3-206ENST00000478048 TTC37Q6PGP7 1564 aa17.9■□□□□ 0.46
CBWD3-206ENST00000478048 TSPOAP1O95153 1857 aa17.89■□□□□ 0.45
CBWD3-206ENST00000478048 MAP3K4Q9Y6R4 1608 aa17.89■□□□□ 0.45
CBWD3-206ENST00000478048 PPARGC1BQ86YN6 1023 aaKnown RBP17.89■□□□□ 0.45
CBWD3-206ENST00000478048 CD109Q6YHK3 1445 aa17.88■□□□□ 0.45
CBWD3-206ENST00000478048 REM2Q8IYK8 340 aaPredicted RBP17.85■□□□□ 0.45
CBWD3-206ENST00000478048 SUPT6HQ7KZ85 1726 aaKnown RBP17.85■□□□□ 0.45
CBWD3-206ENST00000478048 PPRC1Q5VV67 1664 aaKnown RBP17.85■□□□□ 0.45
CBWD3-206ENST00000478048 NCOA2Q15596 1464 aa17.84■□□□□ 0.45
CBWD3-206ENST00000478048 MYO5CQ9NQX4 1742 aa17.82■□□□□ 0.44
CBWD3-206ENST00000478048 CDC42BPAQ5VT25 1732 aa17.81■□□□□ 0.44
CBWD3-206ENST00000478048 PLCH2O75038 1416 aa17.8■□□□□ 0.44
CBWD3-206ENST00000478048 CCNB3Q8WWL7 1395 aa17.8■□□□□ 0.44
CBWD3-206ENST00000478048 GPATCH8Q9UKJ3 1502 aaKnown RBP17.8■□□□□ 0.44
CBWD3-206ENST00000478048 CDC42BPBQ9Y5S2 1711 aa17.79■□□□□ 0.44
CBWD3-206ENST00000478048 PREX2Q70Z35 1606 aa17.78■□□□□ 0.44
CBWD3-206ENST00000478048 PHLDB1Q86UU1 1377 aa17.76■□□□□ 0.43
CBWD3-206ENST00000478048 FANCAO15360 1455 aa17.76■□□□□ 0.43
CBWD3-206ENST00000478048 TEX14Q8IWB6 1497 aa17.76■□□□□ 0.43
CBWD3-206ENST00000478048 ARHGAP5Q13017 1502 aa17.75■□□□□ 0.43
CBWD3-206ENST00000478048 ARAP3Q8WWN8 1544 aa17.74■□□□□ 0.43
CBWD3-206ENST00000478048 CFDP1Q9UEE9 299 aaPredicted RBP17.73■□□□□ 0.43
CBWD3-206ENST00000478048 ITSN2Q9NZM3 1697 aa17.73■□□□□ 0.43
CBWD3-206ENST00000478048 EFCAB2Q5VUJ9 269 aa17.72■□□□□ 0.43
CBWD3-206ENST00000478048 SPDYE2BA6NHP3 402 aa17.72■□□□□ 0.43
CBWD3-206ENST00000478048 SPDYE6P0CI01 402 aa17.72■□□□□ 0.43
CBWD3-206ENST00000478048 SPDYE2Q495Y8 402 aa17.72■□□□□ 0.43
CBWD3-206ENST00000478048 MYOM3Q5VTT5 1437 aa17.72■□□□□ 0.43
CBWD3-206ENST00000478048 ZNF777Q9ULD5 760 aaPredicted RBP17.72■□□□□ 0.43
CBWD3-206ENST00000478048 NEO1Q92859 1461 aa17.71■□□□□ 0.43
CBWD3-206ENST00000478048 AKNAQ7Z591 1439 aa17.7■□□□□ 0.42
CBWD3-206ENST00000478048 ZNF644Q9H582 1327 aaPredicted RBP17.7■□□□□ 0.42
CBWD3-206ENST00000478048 CFAP74Q9C0B2 1584 aa17.69■□□□□ 0.42
CBWD3-206ENST00000478048 SAMD9LQ8IVG5 1584 aa17.69■□□□□ 0.42
CBWD3-206ENST00000478048 COL17A1Q9UMD9 1497 aaPredicted RBP17.69■□□□□ 0.42
CBWD3-206ENST00000478048 ADGRL1O94910 1474 aa17.67■□□□□ 0.42
CBWD3-206ENST00000478048 FGD6Q6ZV73 1430 aa17.66■□□□□ 0.42
CBWD3-206ENST00000478048 MIA2Q96PC5 1412 aa17.66■□□□□ 0.42
CBWD3-206ENST00000478048 ARHGEF12Q9NZN5 1544 aa17.65■□□□□ 0.42
CBWD3-206ENST00000478048 SCAPERQ9BY12 1400 aa17.64■□□□□ 0.42
CBWD3-206ENST00000478048 ABCC1P33527 1531 aa17.64■□□□□ 0.41
CBWD3-206ENST00000478048 CAMSAP2Q08AD1 1489 aa17.64■□□□□ 0.41
CBWD3-206ENST00000478048 KDM6BO15054 1643 aa17.64■□□□□ 0.41
CBWD3-206ENST00000478048 PITPNM1O00562 1244 aa17.64■□□□□ 0.41
CBWD3-206ENST00000478048 RAPGEF3O95398 923 aa17.63■□□□□ 0.41
CBWD3-206ENST00000478048 SYCP2Q9BX26 1530 aa17.62■□□□□ 0.41
CBWD3-206ENST00000478048 PTPN23Q9H3S7 1636 aa17.62■□□□□ 0.41
CBWD3-206ENST00000478048 HNRNPMP52272 730 aaKnown RBP eCLIP17.62■□□□□ 0.41
CBWD3-206ENST00000478048 DENND4BO75064 1496 aaPredicted RBP17.6■□□□□ 0.41
CBWD3-206ENST00000478048 PIP4P2Q8N4L2 257 aa17.6■□□□□ 0.41
CBWD3-206ENST00000478048 TRAPPC8Q9Y2L5 1435 aa17.6■□□□□ 0.41
CBWD3-206ENST00000478048 MKRN4PQ13434 485 aaPredicted RBP17.59■□□□□ 0.41
CBWD3-206ENST00000478048 FRMPD1Q5SYB0 1578 aa17.59■□□□□ 0.41
CBWD3-206ENST00000478048 RICTORQ6R327 1708 aa17.59■□□□□ 0.41
CBWD3-206ENST00000478048 KIAA1107Q9UPP5 1409 aa17.59■□□□□ 0.41
CBWD3-206ENST00000478048 TCOF1Q13428 1488 aaKnown RBP17.59■□□□□ 0.41
CBWD3-206ENST00000478048 PLEKHH2Q8IVE3 1493 aa17.59■□□□□ 0.41
CBWD3-206ENST00000478048 MBD5Q9P267 1494 aa17.59■□□□□ 0.41
CBWD3-206ENST00000478048 AFAP1Q8N556 730 aa17.58■□□□□ 0.41
CBWD3-206ENST00000478048 POGZQ7Z3K3 1410 aa17.58■□□□□ 0.4
CBWD3-206ENST00000478048 FAM50AQ14320 339 aaKnown RBP17.57■□□□□ 0.4
CBWD3-206ENST00000478048 RRBP1Q9P2E9 1410 aaKnown RBP17.55■□□□□ 0.4
CBWD3-206ENST00000478048 ZNF518AQ6AHZ1 1483 aa17.54■□□□□ 0.4
CBWD3-206ENST00000478048 ARHGEF5Q12774 1597 aa17.53■□□□□ 0.4
CBWD3-206ENST00000478048 KDM5CP41229 1560 aa17.52■□□□□ 0.4
CBWD3-206ENST00000478048 FXR2P51116 673 aaKnown RBP eCLIP17.52■□□□□ 0.39
CBWD3-206ENST00000478048 CCDC141Q6ZP82 1450 aa17.51■□□□□ 0.39
CBWD3-206ENST00000478048 ABCC5O15440 1437 aa17.5■□□□□ 0.39
CBWD3-206ENST00000478048 RSPH4AQ5TD94 716 aa17.5■□□□□ 0.39
CBWD3-206ENST00000478048 ZMYM4Q5VZL5 1548 aa17.49■□□□□ 0.39
CBWD3-206ENST00000478048 DNMT1P26358 1616 aaKnown RBP17.49■□□□□ 0.39
CBWD3-206ENST00000478048 DAPK1P53355 1430 aa17.49■□□□□ 0.39
CBWD3-206ENST00000478048 SPAG9O60271 1321 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms