RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 CCNB3Q8WWL7 1395 aa21.19■□□□□ 0.98
ACTN4-205ENST00000477174 CFDP1Q9UEE9 299 aaPredicted RBP21.18■□□□□ 0.98
ACTN4-205ENST00000477174 GPATCH8Q9UKJ3 1502 aaKnown RBP21.18■□□□□ 0.98
ACTN4-205ENST00000477174 POGZQ7Z3K3 1410 aa21.16■□□□□ 0.98
ACTN4-205ENST00000477174 FRMPD1Q5SYB0 1578 aa21.15■□□□□ 0.98
ACTN4-205ENST00000477174 EHBP1L1Q8N3D4 1523 aa21.15■□□□□ 0.98
ACTN4-205ENST00000477174 MAGI2Q86UL8 1455 aa21.15■□□□□ 0.98
ACTN4-205ENST00000477174 APLP2Q06481 763 aa21.15■□□□□ 0.98
ACTN4-205ENST00000477174 AFAP1Q8N556 730 aa21.15■□□□□ 0.98
ACTN4-205ENST00000477174 ZNF777Q9ULD5 760 aaPredicted RBP21.15■□□□□ 0.98
ACTN4-205ENST00000477174 MAP3K1Q13233 1512 aa21.14■□□□□ 0.97
ACTN4-205ENST00000477174 RICTORQ6R327 1708 aa21.12■□□□□ 0.97
ACTN4-205ENST00000477174 CDC42BPBQ9Y5S2 1711 aa21.12■□□□□ 0.97
ACTN4-205ENST00000477174 PREX2Q70Z35 1606 aa21.11■□□□□ 0.97
ACTN4-205ENST00000477174 TIAM1Q13009 1591 aa21.11■□□□□ 0.97
ACTN4-205ENST00000477174 ZMYM4Q5VZL5 1548 aa21.11■□□□□ 0.97
ACTN4-205ENST00000477174 ZNF518AQ6AHZ1 1483 aa21.11■□□□□ 0.97
ACTN4-205ENST00000477174 LRRC9Q6ZRR7 1453 aa21.1■□□□□ 0.97
ACTN4-205ENST00000477174 KANK4Q5T7N3 995 aaPredicted RBP21.1■□□□□ 0.97
ACTN4-205ENST00000477174 KIAA1107Q9UPP5 1409 aa21.08■□□□□ 0.97
ACTN4-205ENST00000477174 ARID4BQ4LE39 1312 aaPredicted RBP21.07■□□□□ 0.96
ACTN4-205ENST00000477174 CDC42BPAQ5VT25 1732 aa21.07■□□□□ 0.96
ACTN4-205ENST00000477174 HNRNPMP52272 730 aaKnown RBP eCLIP21.07■□□□□ 0.96
ACTN4-205ENST00000477174 NCOA2Q15596 1464 aa21.07■□□□□ 0.96
ACTN4-205ENST00000477174 YEATS2Q9ULM3 1422 aa21.06■□□□□ 0.96
ACTN4-205ENST00000477174 TRAPPC8Q9Y2L5 1435 aa21.06■□□□□ 0.96
ACTN4-205ENST00000477174 ARHGEF12Q9NZN5 1544 aa21.06■□□□□ 0.96
ACTN4-205ENST00000477174 MYT1LQ9UL68 1186 aa21.06■□□□□ 0.96
ACTN4-205ENST00000477174 PLEKHH2Q8IVE3 1493 aa21.06■□□□□ 0.96
ACTN4-205ENST00000477174 ABCC1P33527 1531 aa21.04■□□□□ 0.96
ACTN4-205ENST00000477174 ZFYVE16Q7Z3T8 1539 aa21.04■□□□□ 0.96
ACTN4-205ENST00000477174 ARHGEF40Q8TER5 1519 aa21.03■□□□□ 0.96
ACTN4-205ENST00000477174 ZNF644Q9H582 1327 aaPredicted RBP21.03■□□□□ 0.96
ACTN4-205ENST00000477174 ATP10AO60312 1499 aa21.02■□□□□ 0.96
ACTN4-205ENST00000477174 MLH3Q9UHC1 1453 aa21.02■□□□□ 0.96
ACTN4-205ENST00000477174 KDM5CP41229 1560 aa21.02■□□□□ 0.95
ACTN4-205ENST00000477174 SUPT6HQ7KZ85 1726 aaKnown RBP21.01■□□□□ 0.95
ACTN4-205ENST00000477174 RSPH4AQ5TD94 716 aa21■□□□□ 0.95
ACTN4-205ENST00000477174 SAMD9LQ8IVG5 1584 aa21■□□□□ 0.95
ACTN4-205ENST00000477174 SPAG9O60271 1321 aaKnown RBP21■□□□□ 0.95
ACTN4-205ENST00000477174 C9orf84Q5VXU9 1444 aa20.96■□□□□ 0.95
ACTN4-205ENST00000477174 SYCP2Q9BX26 1530 aa20.96■□□□□ 0.95
ACTN4-205ENST00000477174 ITSN2Q9NZM3 1697 aa20.95■□□□□ 0.94
ACTN4-205ENST00000477174 MBD5Q9P267 1494 aa20.94■□□□□ 0.94
ACTN4-205ENST00000477174 HECW2Q9P2P5 1572 aa20.93■□□□□ 0.94
ACTN4-205ENST00000477174 MIA2Q96PC5 1412 aa20.92■□□□□ 0.94
ACTN4-205ENST00000477174 MYOM3Q5VTT5 1437 aa20.91■□□□□ 0.94
ACTN4-205ENST00000477174 MLECQ14165 292 aa20.9■□□□□ 0.94
ACTN4-205ENST00000477174 CAMSAP2Q08AD1 1489 aa20.88■□□□□ 0.93
ACTN4-205ENST00000477174 TSPY4P0CV99 314 aa20.88■□□□□ 0.93
ACTN4-205ENST00000477174 TSPY10P0CW01 314 aa20.88■□□□□ 0.93
ACTN4-205ENST00000477174 ADAMTSL3P82987 1691 aa20.88■□□□□ 0.93
ACTN4-205ENST00000477174 RTEL1-TNFRSF6BF6WH68 1400 aa20.87■□□□□ 0.93
ACTN4-205ENST00000477174 BCORL1Q5H9F3 1711 aa20.87■□□□□ 0.93
ACTN4-205ENST00000477174 DIP2CQ9Y2E4 1556 aa20.87■□□□□ 0.93
ACTN4-205ENST00000477174 REREQ9P2R6 1566 aa20.86■□□□□ 0.93
ACTN4-205ENST00000477174 KIDINS220Q9ULH0 1771 aa20.85■□□□□ 0.93
ACTN4-205ENST00000477174 PTPRMP28827 1452 aa20.85■□□□□ 0.93
ACTN4-205ENST00000477174 CCDC141Q6ZP82 1450 aa20.84■□□□□ 0.93
ACTN4-205ENST00000477174 AGLP35573 1532 aa20.83■□□□□ 0.93
ACTN4-205ENST00000477174 ATP7AQ04656 1500 aa20.83■□□□□ 0.93
ACTN4-205ENST00000477174 ABCA6Q8N139 1617 aa20.83■□□□□ 0.93
ACTN4-205ENST00000477174 SIGLEC1Q9BZZ2 1709 aa20.81■□□□□ 0.92
ACTN4-205ENST00000477174 A2MP01023 1474 aa20.79■□□□□ 0.92
ACTN4-205ENST00000477174 ARHGEF5Q12774 1597 aa20.79■□□□□ 0.92
ACTN4-205ENST00000477174 INO80Q9ULG1 1556 aaPredicted RBP20.79■□□□□ 0.92
ACTN4-205ENST00000477174 MADDQ8WXG6 1647 aa20.78■□□□□ 0.92
ACTN4-205ENST00000477174 ESF1Q9H501 851 aaKnown RBP20.78■□□□□ 0.92
ACTN4-205ENST00000477174 FGD6Q6ZV73 1430 aa20.78■□□□□ 0.92
ACTN4-205ENST00000477174 DHX29Q7Z478 1369 aaKnown RBP20.77■□□□□ 0.92
ACTN4-205ENST00000477174 PPP6R1Q9UPN7 881 aa20.76■□□□□ 0.91
ACTN4-205ENST00000477174 GGT6Q6P531 493 aa20.72■□□□□ 0.91
ACTN4-205ENST00000477174 TCOF1Q13428 1488 aaKnown RBP20.72■□□□□ 0.91
ACTN4-205ENST00000477174 PLXNC1O60486 1568 aa20.71■□□□□ 0.91
ACTN4-205ENST00000477174 KIF3BO15066 747 aa20.7■□□□□ 0.9
ACTN4-205ENST00000477174 CEBPAP49715 358 aaPredicted RBP20.7■□□□□ 0.9
ACTN4-205ENST00000477174 PLPPR3Q6T4P5 718 aa20.7■□□□□ 0.9
ACTN4-205ENST00000477174 PTPN23Q9H3S7 1636 aa20.7■□□□□ 0.9
ACTN4-205ENST00000477174 RIMS1Q86UR5 1692 aaKnown RBP20.7■□□□□ 0.9
ACTN4-205ENST00000477174 ABCC5O15440 1437 aa20.7■□□□□ 0.9
ACTN4-205ENST00000477174 CNTLNQ9NXG0 1405 aa20.7■□□□□ 0.9
ACTN4-205ENST00000477174 ADGBQ8N7X0 1667 aa20.68■□□□□ 0.9
ACTN4-205ENST00000477174 FAM50AQ14320 339 aaKnown RBP20.68■□□□□ 0.9
ACTN4-205ENST00000477174 PPARGC1BQ86YN6 1023 aaKnown RBP20.68■□□□□ 0.9
ACTN4-205ENST00000477174 MAST1Q9Y2H9 1570 aa20.67■□□□□ 0.9
ACTN4-205ENST00000477174 FER1L4A9Z1Z3 1794 aa20.66■□□□□ 0.9
ACTN4-205ENST00000477174 DAPK1P53355 1430 aa20.65■□□□□ 0.9
ACTN4-205ENST00000477174 SHANK2Q9UPX8 1470 aa20.64■□□□□ 0.89
ACTN4-205ENST00000477174 ZMYM3Q14202 1370 aa20.63■□□□□ 0.89
ACTN4-205ENST00000477174 RRP7BPQ9NSQ0 103 aa20.63■□□□□ 0.89
ACTN4-205ENST00000477174 CHIC2Q9UKJ5 165 aa20.62■□□□□ 0.89
ACTN4-205ENST00000477174 ANKRD30AQ9BXX3 1397 aa20.6■□□□□ 0.89
ACTN4-205ENST00000477174 KIF15Q9NS87 1388 aa20.6■□□□□ 0.89
ACTN4-205ENST00000477174 DNMT1P26358 1616 aaKnown RBP20.59■□□□□ 0.89
ACTN4-205ENST00000477174 WASHC2CQ9Y4E1 1318 aa20.58■□□□□ 0.89
ACTN4-205ENST00000477174 NCOA1Q15788 1441 aa20.57■□□□□ 0.88
ACTN4-205ENST00000477174 DUOX2Q9NRD8 1548 aa20.57■□□□□ 0.88
ACTN4-205ENST00000477174 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.57■□□□□ 0.88
ACTN4-205ENST00000477174 LMTK3Q96Q04 1460 aa20.56■□□□□ 0.88
ACTN4-205ENST00000477174 SETD1BQ9UPS6 1966 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms