RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 ARAP3Q8WWN8 1544 aa22.59■■□□□ 1.21
CCNL1-217ENST00000476367 COL17A1Q9UMD9 1497 aaPredicted RBP22.59■■□□□ 1.21
CCNL1-217ENST00000476367 ITSN2Q9NZM3 1697 aa22.55■■□□□ 1.2
CCNL1-217ENST00000476367 NCOA2Q15596 1464 aa22.54■■□□□ 1.2
CCNL1-217ENST00000476367 AKNAQ7Z591 1439 aa22.53■■□□□ 1.2
CCNL1-217ENST00000476367 CCNB3Q8WWL7 1395 aa22.53■■□□□ 1.2
CCNL1-217ENST00000476367 GPATCH8Q9UKJ3 1502 aaKnown RBP22.51■■□□□ 1.19
CCNL1-217ENST00000476367 PHLDB1Q86UU1 1377 aa22.51■■□□□ 1.19
CCNL1-217ENST00000476367 ADGRL1O94910 1474 aa22.5■■□□□ 1.19
CCNL1-217ENST00000476367 EFCAB2Q5VUJ9 269 aa22.49■■□□□ 1.19
CCNL1-217ENST00000476367 FRMPD1Q5SYB0 1578 aa22.49■■□□□ 1.19
CCNL1-217ENST00000476367 RICTORQ6R327 1708 aa22.48■■□□□ 1.19
CCNL1-217ENST00000476367 SAMD9LQ8IVG5 1584 aa22.47■■□□□ 1.19
CCNL1-217ENST00000476367 PPARGC1BQ86YN6 1023 aaKnown RBP22.46■■□□□ 1.19
CCNL1-217ENST00000476367 DENND4BO75064 1496 aaPredicted RBP22.46■■□□□ 1.19
CCNL1-217ENST00000476367 ABCC1P33527 1531 aa22.45■■□□□ 1.19
CCNL1-217ENST00000476367 SCAPERQ9BY12 1400 aa22.44■■□□□ 1.18
CCNL1-217ENST00000476367 RAPGEF3O95398 923 aa22.43■■□□□ 1.18
CCNL1-217ENST00000476367 ZNF777Q9ULD5 760 aaPredicted RBP22.43■■□□□ 1.18
CCNL1-217ENST00000476367 CFDP1Q9UEE9 299 aaPredicted RBP22.42■■□□□ 1.18
CCNL1-217ENST00000476367 POGZQ7Z3K3 1410 aa22.41■■□□□ 1.18
CCNL1-217ENST00000476367 SYCP2Q9BX26 1530 aa22.4■■□□□ 1.18
CCNL1-217ENST00000476367 ARHGEF12Q9NZN5 1544 aa22.38■■□□□ 1.17
CCNL1-217ENST00000476367 ZMYM4Q5VZL5 1548 aa22.37■■□□□ 1.17
CCNL1-217ENST00000476367 MYOM3Q5VTT5 1437 aa22.37■■□□□ 1.17
CCNL1-217ENST00000476367 ZNF518AQ6AHZ1 1483 aa22.35■■□□□ 1.17
CCNL1-217ENST00000476367 CAMSAP2Q08AD1 1489 aa22.35■■□□□ 1.17
CCNL1-217ENST00000476367 PLEKHH2Q8IVE3 1493 aa22.34■■□□□ 1.17
CCNL1-217ENST00000476367 ZNF644Q9H582 1327 aaPredicted RBP22.33■■□□□ 1.17
CCNL1-217ENST00000476367 KDM5CP41229 1560 aa22.33■■□□□ 1.17
CCNL1-217ENST00000476367 TRAPPC8Q9Y2L5 1435 aa22.33■■□□□ 1.17
CCNL1-217ENST00000476367 ARHGEF40Q8TER5 1519 aa22.32■■□□□ 1.16
CCNL1-217ENST00000476367 HECW2Q9P2P5 1572 aa22.31■■□□□ 1.16
CCNL1-217ENST00000476367 ZFYVE16Q7Z3T8 1539 aa22.3■■□□□ 1.16
CCNL1-217ENST00000476367 HNRNPMP52272 730 aaKnown RBP eCLIP22.29■■□□□ 1.167e-11■■■■□ 25.8
CCNL1-217ENST00000476367 AFAP1Q8N556 730 aa22.29■■□□□ 1.16
CCNL1-217ENST00000476367 KIAA1107Q9UPP5 1409 aa22.29■■□□□ 1.16
CCNL1-217ENST00000476367 PTPN23Q9H3S7 1636 aa22.28■■□□□ 1.16
CCNL1-217ENST00000476367 MIA2Q96PC5 1412 aa22.28■■□□□ 1.16
CCNL1-217ENST00000476367 YEATS2Q9ULM3 1422 aa22.28■■□□□ 1.16
CCNL1-217ENST00000476367 FGD6Q6ZV73 1430 aa22.26■■□□□ 1.15
CCNL1-217ENST00000476367 MAGI2Q86UL8 1455 aa22.25■■□□□ 1.15
CCNL1-217ENST00000476367 MYT1LQ9UL68 1186 aa22.24■■□□□ 1.15
CCNL1-217ENST00000476367 KIDINS220Q9ULH0 1771 aa22.24■■□□□ 1.15
CCNL1-217ENST00000476367 MBD5Q9P267 1494 aa22.24■■□□□ 1.15
CCNL1-217ENST00000476367 ABCA6Q8N139 1617 aa22.24■■□□□ 1.15
CCNL1-217ENST00000476367 INO80Q9ULG1 1556 aaPredicted RBP22.22■■□□□ 1.15
CCNL1-217ENST00000476367 CCDC141Q6ZP82 1450 aa22.22■■□□□ 1.15
CCNL1-217ENST00000476367 ARHGEF5Q12774 1597 aa22.22■■□□□ 1.15
CCNL1-217ENST00000476367 MLH3Q9UHC1 1453 aa22.21■■□□□ 1.15
CCNL1-217ENST00000476367 DIP2CQ9Y2E4 1556 aa22.21■■□□□ 1.15
CCNL1-217ENST00000476367 ATP7AQ04656 1500 aa22.21■■□□□ 1.15
CCNL1-217ENST00000476367 TCOF1Q13428 1488 aaKnown RBP22.21■■□□□ 1.15
CCNL1-217ENST00000476367 SIGLEC1Q9BZZ2 1709 aa22.19■■□□□ 1.14
CCNL1-217ENST00000476367 SPAG9O60271 1321 aaKnown RBP22.18■■□□□ 1.14
CCNL1-217ENST00000476367 RRBP1Q9P2E9 1410 aaKnown RBP22.17■■□□□ 1.14
CCNL1-217ENST00000476367 CROCC2H7BZ55 1655 aa22.17■■□□□ 1.14
CCNL1-217ENST00000476367 ATP10AO60312 1499 aa22.14■■□□□ 1.14
CCNL1-217ENST00000476367 DNMT1P26358 1616 aaKnown RBP22.14■■□□□ 1.14
CCNL1-217ENST00000476367 C9orf84Q5VXU9 1444 aa22.14■■□□□ 1.14
CCNL1-217ENST00000476367 FAM50AQ14320 339 aaKnown RBP22.12■■□□□ 1.13
CCNL1-217ENST00000476367 ADGBQ8N7X0 1667 aa22.12■■□□□ 1.13
CCNL1-217ENST00000476367 ARID4BQ4LE39 1312 aaPredicted RBP22.11■■□□□ 1.13
CCNL1-217ENST00000476367 REREQ9P2R6 1566 aa22.1■■□□□ 1.13
CCNL1-217ENST00000476367 MAST1Q9Y2H9 1570 aa22.1■■□□□ 1.13
CCNL1-217ENST00000476367 RSPH4AQ5TD94 716 aa22.09■■□□□ 1.13
CCNL1-217ENST00000476367 BCORL1Q5H9F3 1711 aa22.09■■□□□ 1.13
CCNL1-217ENST00000476367 DAPK1P53355 1430 aa22.09■■□□□ 1.13
CCNL1-217ENST00000476367 RTEL1-TNFRSF6BF6WH68 1400 aa22.08■■□□□ 1.12
CCNL1-217ENST00000476367 ABCC5O15440 1437 aa22.07■■□□□ 1.12
CCNL1-217ENST00000476367 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.07■■□□□ 1.122e-9■□□□□ 10.1
CCNL1-217ENST00000476367 TSPY4P0CV99 314 aa22.06■■□□□ 1.12
CCNL1-217ENST00000476367 TSPY10P0CW01 314 aa22.06■■□□□ 1.12
CCNL1-217ENST00000476367 PTPRKQ15262 1439 aa22.06■■□□□ 1.12
CCNL1-217ENST00000476367 SHANK2Q9UPX8 1470 aa22.06■■□□□ 1.12
CCNL1-217ENST00000476367 PLXNC1O60486 1568 aa22.04■■□□□ 1.12
CCNL1-217ENST00000476367 A2MP01023 1474 aa22.04■■□□□ 1.12
CCNL1-217ENST00000476367 ADAMTSL3P82987 1691 aa22.02■■□□□ 1.12
CCNL1-217ENST00000476367 KDM4FA0A1W2PPD8 638 aa22.02■■□□□ 1.11
CCNL1-217ENST00000476367 MADDQ8WXG6 1647 aa22.01■■□□□ 1.11
CCNL1-217ENST00000476367 AGLP35573 1532 aa22■■□□□ 1.11
CCNL1-217ENST00000476367 MLECQ14165 292 aa22■■□□□ 1.11
CCNL1-217ENST00000476367 FER1L4A9Z1Z3 1794 aa22■■□□□ 1.11
CCNL1-217ENST00000476367 CHIC2Q9UKJ5 165 aa21.98■■□□□ 1.11
CCNL1-217ENST00000476367 RIMS1Q86UR5 1692 aaKnown RBP21.97■■□□□ 1.11
CCNL1-217ENST00000476367 ITGAEP38570 1179 aa21.95■■□□□ 1.1
CCNL1-217ENST00000476367 DHX29Q7Z478 1369 aaKnown RBP21.94■■□□□ 1.1
CCNL1-217ENST00000476367 KIF15Q9NS87 1388 aa21.94■■□□□ 1.1
CCNL1-217ENST00000476367 DUOX2Q9NRD8 1548 aa21.92■■□□□ 1.1
CCNL1-217ENST00000476367 ANKRD30AQ9BXX3 1397 aa21.92■■□□□ 1.1
CCNL1-217ENST00000476367 ADGRL2O95490 1459 aa21.92■■□□□ 1.1
CCNL1-217ENST00000476367 RRP7BPQ9NSQ0 103 aa21.91■■□□□ 1.1
CCNL1-217ENST00000476367 EIF2AK4Q9P2K8 1649 aaKnown RBP21.9■■□□□ 1.1
CCNL1-217ENST00000476367 NCOA1Q15788 1441 aa21.9■■□□□ 1.1
CCNL1-217ENST00000476367 KIF3BO15066 747 aa21.87■■□□□ 1.09
CCNL1-217ENST00000476367 PTPRMP28827 1452 aa21.86■■□□□ 1.09
CCNL1-217ENST00000476367 RNF17Q9BXT8 1623 aaKnown RBP21.85■■□□□ 1.09
CCNL1-217ENST00000476367 GGT6Q6P531 493 aa21.85■■□□□ 1.09
CCNL1-217ENST00000476367 CLTCQ00610 1675 aaKnown RBP21.85■■□□□ 1.09
CCNL1-217ENST00000476367 ERBINQ96RT1 1412 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms